RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 NDUFB9Q9Y6M9 179 aa10.48□□□□□ -0.73
TDP1-203ENST00000393454 UBR3Q6ZT12 1888 aa10.48□□□□□ -0.73
TDP1-203ENST00000393454 RIC1Q4ADV7 1423 aa10.47□□□□□ -0.73
TDP1-203ENST00000393454 HIP1O00291 1037 aa10.47□□□□□ -0.73
TDP1-203ENST00000393454 PLSCR1O15162 318 aa10.47□□□□□ -0.73
TDP1-203ENST00000393454 IFIT1P09914 478 aaKnown RBP10.47□□□□□ -0.73
TDP1-203ENST00000393454 SSFA2P28290 1259 aa10.47□□□□□ -0.73
TDP1-203ENST00000393454 SLC10A5Q5PT55 438 aa10.47□□□□□ -0.73
TDP1-203ENST00000393454 KIAA1211Q6ZU35 1233 aa10.47□□□□□ -0.73
TDP1-203ENST00000393454 C3orf67Q6ZVT6 689 aa10.47□□□□□ -0.73
TDP1-203ENST00000393454 NLRP3Q96P20 1036 aa10.47□□□□□ -0.73
TDP1-203ENST00000393454 CDC5LQ99459 802 aaKnown RBP10.47□□□□□ -0.73
TDP1-203ENST00000393454 HAUS7Q99871 368 aa10.47□□□□□ -0.73
TDP1-203ENST00000393454 TFCP2L1Q9NZI6 479 aa10.47□□□□□ -0.73
TDP1-203ENST00000393454 SPEF2Q9C093 1822 aa10.47□□□□□ -0.73
TDP1-203ENST00000393454 SGSM2O43147 1006 aa10.46□□□□□ -0.73
TDP1-203ENST00000393454 PDE8BO95263 885 aa10.46□□□□□ -0.73
TDP1-203ENST00000393454 MCCP23508 829 aa10.46□□□□□ -0.73
TDP1-203ENST00000393454 NFIXQ14938 502 aa10.46□□□□□ -0.73
TDP1-203ENST00000393454 SF3B3Q15393 1217 aaKnown RBP10.46□□□□□ -0.73
TDP1-203ENST00000393454 RTL9Q8NET4 1388 aa10.46□□□□□ -0.73
TDP1-203ENST00000393454 ABCC12Q96J65 1359 aa10.46□□□□□ -0.73
TDP1-203ENST00000393454 DDX46Q7L014 1031 aaKnown RBP10.46□□□□□ -0.74
TDP1-203ENST00000393454 ANKRD18AQ8IVF6 992 aa10.46□□□□□ -0.74
TDP1-203ENST00000393454 IL25Q9H293 177 aa10.46□□□□□ -0.74
TDP1-203ENST00000393454 PAG1Q9NWQ8 432 aa10.46□□□□□ -0.74
TDP1-203ENST00000393454 CARMIL3Q8ND23 1372 aa10.46□□□□□ -0.74
TDP1-203ENST00000393454 COL24A1Q17RW2 1714 aa10.45□□□□□ -0.74
TDP1-203ENST00000393454 GOLIM4O00461 696 aa10.45□□□□□ -0.74
TDP1-203ENST00000393454 TAF5LO75529 589 aa10.45□□□□□ -0.74
TDP1-203ENST00000393454 GYS1P13807 737 aa10.45□□□□□ -0.74
TDP1-203ENST00000393454 NMIQ13287 307 aaPredicted RBP10.45□□□□□ -0.74
TDP1-203ENST00000393454 HSCBQ8IWL3 235 aa10.45□□□□□ -0.74
TDP1-203ENST00000393454 VGLL2Q8N8G2 317 aa10.45□□□□□ -0.74
TDP1-203ENST00000393454 KIF2CQ99661 725 aa10.45□□□□□ -0.74
TDP1-203ENST00000393454 TBC1D2Q9BYX2 928 aa10.45□□□□□ -0.74
TDP1-203ENST00000393454 CASZ1Q86V15 1759 aa10.45□□□□□ -0.74
TDP1-203ENST00000393454 KCNA4P22459 653 aa10.45□□□□□ -0.74
TDP1-203ENST00000393454 FKBP4Q02790 459 aaKnown RBP eCLIP10.45□□□□□ -0.74
TDP1-203ENST00000393454 PUM3Q15397 648 aaKnown RBP10.45□□□□□ -0.74
TDP1-203ENST00000393454 CNBD1Q8NA66 436 aa10.45□□□□□ -0.74
TDP1-203ENST00000393454 FAM227BQ96M60 508 aa10.45□□□□□ -0.74
TDP1-203ENST00000393454 SNRKQ9NRH2 765 aa10.45□□□□□ -0.74
TDP1-203ENST00000393454 SLC5A1P13866 664 aa10.44□□□□□ -0.74
TDP1-203ENST00000393454 ZNF827Q17R98 1081 aa10.44□□□□□ -0.74
TDP1-203ENST00000393454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.44□□□□□ -0.74
TDP1-203ENST00000393454 LPIN2Q92539 896 aa10.44□□□□□ -0.74
TDP1-203ENST00000393454 TAF1P21675 1872 aa10.44□□□□□ -0.74
TDP1-203ENST00000393454 CHRNDQ07001 517 aa10.43□□□□□ -0.74
TDP1-203ENST00000393454 RABEP1Q15276 862 aa10.43□□□□□ -0.74
TDP1-203ENST00000393454 KBTBD3Q8NAB2 608 aa10.43□□□□□ -0.74
TDP1-203ENST00000393454 LRP5O75197 1615 aa10.43□□□□□ -0.74
TDP1-203ENST00000393454 A0A0D9SFI3 127 aa10.43□□□□□ -0.74
TDP1-203ENST00000393454 SERPINB2P05120 415 aa10.43□□□□□ -0.74
TDP1-203ENST00000393454 CELF1Q92879 486 aaKnown RBP10.43□□□□□ -0.74
TDP1-203ENST00000393454 LSG1Q9H089 658 aaKnown RBP10.43□□□□□ -0.74
TDP1-203ENST00000393454 SNAP23O00161 211 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 FGFR2P21802 821 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 KCNJ4P48050 445 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 RPS8P62241 208 aaKnown RBP10.42□□□□□ -0.74
TDP1-203ENST00000393454 ST5P78524 1137 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 SPRYD3Q8NCJ5 442 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 AKT1S1Q96B36 256 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 BSDC1Q9NW68 430 aaPredicted RBP10.42□□□□□ -0.74
TDP1-203ENST00000393454 EPB41L2O43491 1005 aaKnown RBP10.42□□□□□ -0.74
TDP1-203ENST00000393454 UQCRFS1P1P0C7P4 283 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 TM4SF1P30408 202 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 ZAP70P43403 619 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 PHKA1P46020 1223 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 SCARF1Q14162 830 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 CCDC102BQ68D86 513 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 PRR5LQ6MZQ0 368 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 COL23A1Q86Y22 540 aaPredicted RBP10.42□□□□□ -0.74
TDP1-203ENST00000393454 SNX21Q969T3 373 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 ANTXR1Q9H6X2 564 aa10.42□□□□□ -0.74
TDP1-203ENST00000393454 TNS1Q9HBL0 1735 aaKnown RBP10.41□□□□□ -0.74
TDP1-203ENST00000393454 RAD50Q92878 1312 aa10.41□□□□□ -0.74
TDP1-203ENST00000393454 COL4A1P02462 1669 aa10.41□□□□□ -0.74
TDP1-203ENST00000393454 CHGBP05060 677 aa10.41□□□□□ -0.74
TDP1-203ENST00000393454 PTH1RQ03431 593 aa10.41□□□□□ -0.74
TDP1-203ENST00000393454 EN1Q05925 392 aaPredicted RBP10.41□□□□□ -0.74
TDP1-203ENST00000393454 LRRFIP1Q32MZ4 808 aaKnown RBP10.41□□□□□ -0.74
TDP1-203ENST00000393454 PI16Q6UXB8 463 aa10.41□□□□□ -0.74
TDP1-203ENST00000393454 FLAD1Q8NFF5 587 aa10.41□□□□□ -0.74
TDP1-203ENST00000393454 PALD1Q9ULE6 856 aa10.41□□□□□ -0.74
TDP1-203ENST00000393454 MINPP1Q9UNW1 487 aa10.41□□□□□ -0.74
TDP1-203ENST00000393454 RFX7Q2KHR2 1363 aa10.4□□□□□ -0.74
TDP1-203ENST00000393454 HSPA4P34932 840 aa10.4□□□□□ -0.74
TDP1-203ENST00000393454 MCAMP43121 646 aa10.4□□□□□ -0.74
TDP1-203ENST00000393454 ANAPC15P60006 121 aa10.4□□□□□ -0.74
TDP1-203ENST00000393454 RPGRQ92834 1020 aaKnown RBP10.4□□□□□ -0.74
TDP1-203ENST00000393454 CCDC171Q6TFL3 1326 aa10.4□□□□□ -0.74
TDP1-203ENST00000393454 TNRC6CQ9HCJ0 1690 aaKnown RBP10.4□□□□□ -0.74
TDP1-203ENST00000393454 RNF113AO15541 343 aaKnown RBP10.4□□□□□ -0.75
TDP1-203ENST00000393454 ST18O60284 1047 aa10.4□□□□□ -0.75
TDP1-203ENST00000393454 DDR1Q08345 913 aa10.4□□□□□ -0.75
TDP1-203ENST00000393454 SF3B2Q13435 895 aaKnown RBP10.4□□□□□ -0.75
TDP1-203ENST00000393454 EZH2Q15910 746 aaKnown RBP10.4□□□□□ -0.75
TDP1-203ENST00000393454 MCMDC2Q4G0Z9 681 aa10.4□□□□□ -0.75
TDP1-203ENST00000393454 ZNF589Q86UQ0 364 aaPredicted RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms