RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 PDE8BO95263 885 aa21.23■□□□□ 0.99
MBD4-202ENST00000393278 IGHMBP2P38935 993 aaKnown RBP21.23■□□□□ 0.99
MBD4-202ENST00000393278 BECN1Q14457 450 aa21.23■□□□□ 0.99
MBD4-202ENST00000393278 NFIXQ14938 502 aa21.23■□□□□ 0.99
MBD4-202ENST00000393278 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.23■□□□□ 0.99
MBD4-202ENST00000393278 XAGE2Q96GT9 111 aa21.23■□□□□ 0.99
MBD4-202ENST00000393278 EPB41L2O43491 1005 aaKnown RBP21.22■□□□□ 0.99
MBD4-202ENST00000393278 GYS1P13807 737 aa21.22■□□□□ 0.99
MBD4-202ENST00000393278 ADORA1P30542 326 aa21.22■□□□□ 0.99
MBD4-202ENST00000393278 RUFY2Q8WXA3 655 aa21.22■□□□□ 0.99
MBD4-202ENST00000393278 CDC5LQ99459 802 aaKnown RBP21.22■□□□□ 0.99
MBD4-202ENST00000393278 DAXXQ9UER7 740 aaPredicted RBP21.22■□□□□ 0.99
MBD4-202ENST00000393278 CASZ1Q86V15 1759 aa21.22■□□□□ 0.99
MBD4-202ENST00000393278 CWC27Q6UX04 472 aaKnown RBP21.21■□□□□ 0.99
MBD4-202ENST00000393278 FSD1Q9BTV5 496 aa21.21■□□□□ 0.99
MBD4-202ENST00000393278 ANO2Q9NQ90 1003 aa21.21■□□□□ 0.99
MBD4-202ENST00000393278 RFX7Q2KHR2 1363 aa21.21■□□□□ 0.99
MBD4-202ENST00000393278 RGPD3A6NKT7 1758 aaPredicted RBP21.21■□□□□ 0.99
MBD4-202ENST00000393278 RGPD4Q7Z3J3 1758 aa21.21■□□□□ 0.99
MBD4-202ENST00000393278 CCDC158Q5M9N0 1113 aa21.21■□□□□ 0.99
MBD4-202ENST00000393278 EDC3Q96F86 508 aaKnown RBP21.21■□□□□ 0.99
MBD4-202ENST00000393278 NLRP3Q96P20 1036 aa21.21■□□□□ 0.99
MBD4-202ENST00000393278 DNAJC2Q99543 621 aaKnown RBP21.21■□□□□ 0.99
MBD4-202ENST00000393278 SLC4A3P48751 1232 aa21.2■□□□□ 0.98
MBD4-202ENST00000393278 GORABQ5T7V8 394 aa21.2■□□□□ 0.98
MBD4-202ENST00000393278 AKT1S1Q96B36 256 aa21.2■□□□□ 0.98
MBD4-202ENST00000393278 SPEF2Q9C093 1822 aa21.19■□□□□ 0.98
MBD4-202ENST00000393278 IFIT1P09914 478 aaKnown RBP21.19■□□□□ 0.98
MBD4-202ENST00000393278 PUM3Q15397 648 aaKnown RBP21.19■□□□□ 0.98
MBD4-202ENST00000393278 ZNF827Q17R98 1081 aa21.19■□□□□ 0.98
MBD4-202ENST00000393278 NDUFB9Q9Y6M9 179 aa21.19■□□□□ 0.98
MBD4-202ENST00000393278 COL4A1P02462 1669 aa21.19■□□□□ 0.98
MBD4-202ENST00000393278 FGFR2P21802 821 aa21.18■□□□□ 0.98
MBD4-202ENST00000393278 TTC39AQ5SRH9 613 aa21.18■□□□□ 0.98
MBD4-202ENST00000393278 ANKRD18AQ8IVF6 992 aa21.18■□□□□ 0.98
MBD4-202ENST00000393278 TBC1D2Q9BYX2 928 aa21.18■□□□□ 0.98
MBD4-202ENST00000393278 LPIN2Q92539 896 aa21.18■□□□□ 0.98
MBD4-202ENST00000393278 PAG1Q9NWQ8 432 aa21.18■□□□□ 0.98
MBD4-202ENST00000393278 RAD50Q92878 1312 aa21.18■□□□□ 0.98
MBD4-202ENST00000393278 ARAP2Q8WZ64 1704 aa21.17■□□□□ 0.98
MBD4-202ENST00000393278 SOCS7O14512 581 aa21.17■□□□□ 0.98
MBD4-202ENST00000393278 TM4SF1P30408 202 aa21.17■□□□□ 0.98
MBD4-202ENST00000393278 NMIQ13287 307 aaPredicted RBP21.17■□□□□ 0.98
MBD4-202ENST00000393278 DDX46Q7L014 1031 aaKnown RBP21.17■□□□□ 0.98
MBD4-202ENST00000393278 TICAM2Q86XR7 235 aa21.17■□□□□ 0.98
MBD4-202ENST00000393278 CNBD1Q8NA66 436 aa21.17■□□□□ 0.98
MBD4-202ENST00000393278 KBTBD3Q8NAB2 608 aa21.17■□□□□ 0.98
MBD4-202ENST00000393278 HELBQ8NG08 1087 aaPredicted RBP21.17■□□□□ 0.98
MBD4-202ENST00000393278 SNRKQ9NRH2 765 aa21.17■□□□□ 0.98
MBD4-202ENST00000393278 TFCP2L1Q9NZI6 479 aa21.17■□□□□ 0.98
MBD4-202ENST00000393278 NPHP1O15259 732 aa21.16■□□□□ 0.98
MBD4-202ENST00000393278 MCCP23508 829 aa21.16■□□□□ 0.98
MBD4-202ENST00000393278 CCDC24Q8N4L8 307 aa21.16■□□□□ 0.98
MBD4-202ENST00000393278 SNX21Q969T3 373 aa21.16■□□□□ 0.98
MBD4-202ENST00000393278 ZNF512BQ96KM6 892 aaPredicted RBP21.16■□□□□ 0.98
MBD4-202ENST00000393278 FAM227BQ96M60 508 aa21.16■□□□□ 0.98
MBD4-202ENST00000393278 LSG1Q9H089 658 aaKnown RBP21.16■□□□□ 0.98
MBD4-202ENST00000393278 TNRC6CQ9HCJ0 1690 aaKnown RBP21.15■□□□□ 0.98
MBD4-202ENST00000393278 GOLIM4O00461 696 aa21.15■□□□□ 0.98
MBD4-202ENST00000393278 RABEP1Q15276 862 aa21.15■□□□□ 0.98
MBD4-202ENST00000393278 ERICH6Q7L0X2 663 aa21.15■□□□□ 0.98
MBD4-202ENST00000393278 BSDC1Q9NW68 430 aaPredicted RBP21.15■□□□□ 0.98
MBD4-202ENST00000393278 SLC5A1P13866 664 aa21.15■□□□□ 0.98
MBD4-202ENST00000393278 CHRNDQ07001 517 aa21.15■□□□□ 0.98
MBD4-202ENST00000393278 KIAA1211Q6ZU35 1233 aa21.15■□□□□ 0.98
MBD4-202ENST00000393278 A0A0D9SFI3 127 aa21.14■□□□□ 0.97
MBD4-202ENST00000393278 TAF5LO75529 589 aa21.14■□□□□ 0.97
MBD4-202ENST00000393278 PRR5LQ6MZQ0 368 aa21.14■□□□□ 0.97
MBD4-202ENST00000393278 CELF1Q92879 486 aaKnown RBP21.14■□□□□ 0.97
MBD4-202ENST00000393278 MED23Q9ULK4 1368 aa21.13■□□□□ 0.97
MBD4-202ENST00000393278 SERPINB2P05120 415 aa21.13■□□□□ 0.97
MBD4-202ENST00000393278 ANAPC15P60006 121 aa21.13■□□□□ 0.97
MBD4-202ENST00000393278 HSCBQ8IWL3 235 aa21.13■□□□□ 0.97
MBD4-202ENST00000393278 FLAD1Q8NFF5 587 aa21.13■□□□□ 0.97
MBD4-202ENST00000393278 IL17RAQ96F46 866 aa21.13■□□□□ 0.97
MBD4-202ENST00000393278 TAF1P21675 1872 aa21.12■□□□□ 0.97
MBD4-202ENST00000393278 HSPA4P34932 840 aa21.12■□□□□ 0.97
MBD4-202ENST00000393278 SCARF1Q14162 830 aa21.12■□□□□ 0.97
MBD4-202ENST00000393278 COL23A1Q86Y22 540 aaPredicted RBP21.12■□□□□ 0.97
MBD4-202ENST00000393278 A0A1B0GUL6 1792 aa21.12■□□□□ 0.97
MBD4-202ENST00000393278 ARID4AP29374 1257 aaPredicted RBP21.12■□□□□ 0.97
MBD4-202ENST00000393278 RPS8P62241 208 aaKnown RBP21.12■□□□□ 0.97
MBD4-202ENST00000393278 DDR1Q08345 913 aa21.12■□□□□ 0.97
MBD4-202ENST00000393278 CCDC102BQ68D86 513 aa21.12■□□□□ 0.97
MBD4-202ENST00000393278 POLRMTO00411 1230 aaKnown RBP21.11■□□□□ 0.97
MBD4-202ENST00000393278 UQCRFS1P1P0C7P4 283 aa21.11■□□□□ 0.97
MBD4-202ENST00000393278 MCAMP43121 646 aa21.11■□□□□ 0.97
MBD4-202ENST00000393278 PHKA1P46020 1223 aa21.11■□□□□ 0.97
MBD4-202ENST00000393278 FKBP4Q02790 459 aaKnown RBP eCLIP21.11■□□□□ 0.97
MBD4-202ENST00000393278 ANTXR1Q9H6X2 564 aa21.11■□□□□ 0.97
MBD4-202ENST00000393278 PALD1Q9ULE6 856 aa21.11■□□□□ 0.97
MBD4-202ENST00000393278 MINPP1Q9UNW1 487 aa21.11■□□□□ 0.97
MBD4-202ENST00000393278 CCDC171Q6TFL3 1326 aa21.1■□□□□ 0.97
MBD4-202ENST00000393278 SNAP23O00161 211 aa21.1■□□□□ 0.97
MBD4-202ENST00000393278 ZAP70P43403 619 aa21.1■□□□□ 0.97
MBD4-202ENST00000393278 ST5P78524 1137 aa21.1■□□□□ 0.97
MBD4-202ENST00000393278 PTH1RQ03431 593 aa21.1■□□□□ 0.97
MBD4-202ENST00000393278 AKAP11Q9UKA4 1901 aa21.09■□□□□ 0.97
MBD4-202ENST00000393278 NLGN1Q8N2Q7 840 aa21.09■□□□□ 0.97
MBD4-202ENST00000393278 CAMKK2Q96RR4 588 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms