RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 ERFEQ4G0M1 354 aa21.29■■□□□ 1
SHTN1-203ENST00000392901 KRT27Q7Z3Y8 459 aa21.29■■□□□ 1
SHTN1-203ENST00000392901 KBTBD3Q8NAB2 608 aa21.29■■□□□ 1
SHTN1-203ENST00000392901 CCDC171Q6TFL3 1326 aa21.28■■□□□ 1
SHTN1-203ENST00000392901 BCORQ6W2J9 1755 aa21.28■■□□□ 1
SHTN1-203ENST00000392901 PHF14O94880 888 aa21.28■■□□□ 1
SHTN1-203ENST00000392901 GTF2E1P29083 439 aaPredicted RBP21.28■■□□□ 1
SHTN1-203ENST00000392901 FKBP4Q02790 459 aaKnown RBP eCLIP21.28■■□□□ 1
SHTN1-203ENST00000392901 RASEFQ8IZ41 740 aa21.28■■□□□ 1
SHTN1-203ENST00000392901 HELBQ8NG08 1087 aaPredicted RBP21.28■■□□□ 1
SHTN1-203ENST00000392901 ARHGEF1Q92888 912 aaKnown RBP21.28■■□□□ 1
SHTN1-203ENST00000392901 MPHOSPH8Q99549 860 aa21.28■■□□□ 1
SHTN1-203ENST00000392901 SNX14Q9Y5W7 946 aa21.28■■□□□ 1
SHTN1-203ENST00000392901 PDE8BO95263 885 aa21.27■■□□□ 1
SHTN1-203ENST00000392901 ZNF589Q86UQ0 364 aaPredicted RBP21.27■■□□□ 1
SHTN1-203ENST00000392901 SNRKQ9NRH2 765 aa21.27■■□□□ 1
SHTN1-203ENST00000392901 KCNJ4P48050 445 aa21.27■■□□□ 1
SHTN1-203ENST00000392901 PRPF40BQ6NWY9 871 aaKnown RBP21.27■■□□□ 1
SHTN1-203ENST00000392901 FAM196AQ6ZSG2 479 aa21.27■■□□□ 1
SHTN1-203ENST00000392901 VGLL2Q8N8G2 317 aa21.27■■□□□ 1
SHTN1-203ENST00000392901 LRRC4BQ9NT99 713 aa21.27■■□□□ 1
SHTN1-203ENST00000392901 IL17RAQ96F46 866 aa21.26■□□□□ 0.99
SHTN1-203ENST00000392901 TRIM37O94972 964 aa21.26■□□□□ 0.99
SHTN1-203ENST00000392901 SETDB2Q96T68 719 aa21.26■□□□□ 0.99
SHTN1-203ENST00000392901 SEC62Q99442 399 aaKnown RBP21.26■□□□□ 0.99
SHTN1-203ENST00000392901 RBM8AQ9Y5S9 174 aaKnown RBP21.26■□□□□ 0.99
SHTN1-203ENST00000392901 LY75O60449 1722 aa21.25■□□□□ 0.99
SHTN1-203ENST00000392901 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.25■□□□□ 0.99
SHTN1-203ENST00000392901 MAP4K1Q92918 833 aa21.25■□□□□ 0.99
SHTN1-203ENST00000392901 DDX60Q8IY21 1712 aaKnown RBP21.25■□□□□ 0.99
SHTN1-203ENST00000392901 SLFNL1Q499Z3 407 aa21.24■□□□□ 0.99
SHTN1-203ENST00000392901 NOL8Q76FK4 1167 aaKnown RBP21.24■□□□□ 0.99
SHTN1-203ENST00000392901 CIZ1Q9ULV3 898 aaPredicted RBP21.24■□□□□ 0.99
SHTN1-203ENST00000392901 MROH5Q6ZUA9 1318 aa21.24■□□□□ 0.99
SHTN1-203ENST00000392901 MED23Q9ULK4 1368 aa21.24■□□□□ 0.99
SHTN1-203ENST00000392901 RFC4P35249 363 aa21.24■□□□□ 0.99
SHTN1-203ENST00000392901 IGHMBP2P38935 993 aaKnown RBP21.24■□□□□ 0.99
SHTN1-203ENST00000392901 SCARF1Q14162 830 aa21.24■□□□□ 0.99
SHTN1-203ENST00000392901 TRAPPC3LQ5T215 181 aa21.24■□□□□ 0.99
SHTN1-203ENST00000392901 RGL2O15211 777 aa21.23■□□□□ 0.99
SHTN1-203ENST00000392901 TAF5LO75529 589 aa21.23■□□□□ 0.99
SHTN1-203ENST00000392901 NECTIN1Q15223 517 aa21.23■□□□□ 0.99
SHTN1-203ENST00000392901 CCDC129Q6ZRS4 1044 aa21.23■□□□□ 0.99
SHTN1-203ENST00000392901 C3orf67Q6ZVT6 689 aa21.23■□□□□ 0.99
SHTN1-203ENST00000392901 RFX7Q2KHR2 1363 aa21.23■□□□□ 0.99
SHTN1-203ENST00000392901 MCM4P33991 863 aa21.23■□□□□ 0.99
SHTN1-203ENST00000392901 MCMDC2Q4G0Z9 681 aa21.23■□□□□ 0.99
SHTN1-203ENST00000392901 TAF1LQ8IZX4 1826 aa21.22■□□□□ 0.99
SHTN1-203ENST00000392901 SNAP23O00161 211 aa21.22■□□□□ 0.99
SHTN1-203ENST00000392901 PUM3Q15397 648 aaKnown RBP21.22■□□□□ 0.99
SHTN1-203ENST00000392901 PI16Q6UXB8 463 aa21.22■□□□□ 0.99
SHTN1-203ENST00000392901 NBPF5PQ86XG9 351 aaPredicted RBP21.22■□□□□ 0.99
SHTN1-203ENST00000392901 ZAP70P43403 619 aa21.21■□□□□ 0.99
SHTN1-203ENST00000392901 MCM2P49736 904 aa21.21■□□□□ 0.99
SHTN1-203ENST00000392901 RAB3GAP1Q15042 981 aa21.21■□□□□ 0.99
SHTN1-203ENST00000392901 CREB3L3Q68CJ9 461 aa21.21■□□□□ 0.99
SHTN1-203ENST00000392901 TNPO1Q92973 898 aaKnown RBP21.21■□□□□ 0.99
SHTN1-203ENST00000392901 SCN7AQ01118 1682 aa21.21■□□□□ 0.99
SHTN1-203ENST00000392901 CCDC24Q8N4L8 307 aa21.21■□□□□ 0.99
SHTN1-203ENST00000392901 LPIN2Q92539 896 aa21.21■□□□□ 0.99
SHTN1-203ENST00000392901 NYXQ9GZU5 481 aa21.21■□□□□ 0.99
SHTN1-203ENST00000392901 BRWD3Q6RI45 1802 aa21.21■□□□□ 0.99
SHTN1-203ENST00000392901 C4BP0C0L5 1744 aa21.2■□□□□ 0.99
SHTN1-203ENST00000392901 RTL9Q8NET4 1388 aa21.2■□□□□ 0.99
SHTN1-203ENST00000392901 ZKSCAN1P17029 563 aaPredicted RBP21.2■□□□□ 0.98
SHTN1-203ENST00000392901 ADCK5Q3MIX3 580 aa21.2■□□□□ 0.98
SHTN1-203ENST00000392901 TMX3Q96JJ7 454 aa21.2■□□□□ 0.98
SHTN1-203ENST00000392901 CASTP20810 708 aaKnown RBP21.2■□□□□ 0.98
SHTN1-203ENST00000392901 ZGPATQ8N5A5 531 aaKnown RBP21.2■□□□□ 0.98
SHTN1-203ENST00000392901 CDC5LQ99459 802 aaKnown RBP21.2■□□□□ 0.98
SHTN1-203ENST00000392901 CPA1P15085 419 aa21.19■□□□□ 0.98
SHTN1-203ENST00000392901 FGFR2P21802 821 aa21.19■□□□□ 0.98
SHTN1-203ENST00000392901 MCAMP43121 646 aa21.19■□□□□ 0.98
SHTN1-203ENST00000392901 RBM6P78332 1123 aaKnown RBP21.19■□□□□ 0.98
SHTN1-203ENST00000392901 SF3B3Q15393 1217 aaKnown RBP21.19■□□□□ 0.98
SHTN1-203ENST00000392901 CCDC102BQ68D86 513 aa21.19■□□□□ 0.98
SHTN1-203ENST00000392901 ZNF772Q68DY9 489 aaPredicted RBP21.19■□□□□ 0.98
SHTN1-203ENST00000392901 JAKMIP1Q96N16 626 aaKnown RBP21.19■□□□□ 0.98
SHTN1-203ENST00000392901 ABCC12Q96J65 1359 aa21.19■□□□□ 0.98
SHTN1-203ENST00000392901 SLC27A2O14975 620 aa21.19■□□□□ 0.98
SHTN1-203ENST00000392901 RNF113AO15541 343 aaKnown RBP21.19■□□□□ 0.98
SHTN1-203ENST00000392901 PHKA1P46020 1223 aa21.19■□□□□ 0.98
SHTN1-203ENST00000392901 GSE1Q14687 1217 aa21.19■□□□□ 0.98
SHTN1-203ENST00000392901 TPTE2Q6XPS3 522 aa21.19■□□□□ 0.98
SHTN1-203ENST00000392901 KCNB2Q92953 911 aa21.19■□□□□ 0.98
SHTN1-203ENST00000392901 LRP5O75197 1615 aa21.19■□□□□ 0.98
SHTN1-203ENST00000392901 LAMB2P55268 1798 aa21.18■□□□□ 0.98
SHTN1-203ENST00000392901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.18■□□□□ 0.98
SHTN1-203ENST00000392901 NPHP1O15259 732 aa21.18■□□□□ 0.98
SHTN1-203ENST00000392901 SLC10A5Q5PT55 438 aa21.18■□□□□ 0.98
SHTN1-203ENST00000392901 HELLSQ9NRZ9 838 aa21.18■□□□□ 0.98
SHTN1-203ENST00000392901 SLC5A1P13866 664 aa21.17■□□□□ 0.98
SHTN1-203ENST00000392901 CHRNDQ07001 517 aa21.17■□□□□ 0.98
SHTN1-203ENST00000392901 ZMYM1Q5SVZ6 1142 aa21.17■□□□□ 0.98
SHTN1-203ENST00000392901 RNF20Q5VTR2 975 aa21.17■□□□□ 0.98
SHTN1-203ENST00000392901 ANKRD18AQ8IVF6 992 aa21.17■□□□□ 0.98
SHTN1-203ENST00000392901 SSFA2P28290 1259 aa21.17■□□□□ 0.98
SHTN1-203ENST00000392901 NLRP3Q96P20 1036 aa21.17■□□□□ 0.98
SHTN1-203ENST00000392901 SLC27A3Q5K4L6 730 aa21.16■□□□□ 0.98
SHTN1-203ENST00000392901 TICAM2Q86XR7 235 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms