RNA–Protein interactions for RNA: ENST00000392396.7

TFRC-202, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-202ENST00000392396 MEIS3Q99687 375 aa20.79■□□□□ 0.92
TFRC-202ENST00000392396 CARD10Q9BWT7 1032 aa20.79■□□□□ 0.92
TFRC-202ENST00000392396 SMTNL1A8MU46 457 aa20.79■□□□□ 0.92
TFRC-202ENST00000392396 SSR1P43307 286 aaKnown RBP20.78■□□□□ 0.92
TFRC-202ENST00000392396 USP37Q86T82 979 aa20.78■□□□□ 0.92
TFRC-202ENST00000392396 SYCP3Q8IZU3 236 aa20.78■□□□□ 0.92
TFRC-202ENST00000392396 BICD1Q96G01 975 aa20.78■□□□□ 0.92
TFRC-202ENST00000392396 MCMDC2Q4G0Z9 681 aa20.78■□□□□ 0.92
TFRC-202ENST00000392396 FKBP15Q5T1M5 1219 aa20.78■□□□□ 0.92
TFRC-202ENST00000392396 VPS36Q86VN1 386 aa20.78■□□□□ 0.92
TFRC-202ENST00000392396 LIMCH1Q9UPQ0 1083 aa20.78■□□□□ 0.92
TFRC-202ENST00000392396 ECM2O94769 699 aaPredicted RBP20.78■□□□□ 0.92
TFRC-202ENST00000392396 CAVIN1Q6NZI2 390 aaKnown RBP20.78■□□□□ 0.92
TFRC-202ENST00000392396 ZNF397Q8NF99 534 aaPredicted RBP20.78■□□□□ 0.92
TFRC-202ENST00000392396 ZBTB43O43298 467 aa20.77■□□□□ 0.92
TFRC-202ENST00000392396 A1BGP04217 495 aa20.77■□□□□ 0.92
TFRC-202ENST00000392396 TNPO1Q92973 898 aaKnown RBP20.77■□□□□ 0.92
TFRC-202ENST00000392396 FERMT2Q96AC1 680 aa20.77■□□□□ 0.92
TFRC-202ENST00000392396 SCAND2PQ9GZW5 306 aaPredicted RBP20.77■□□□□ 0.92
TFRC-202ENST00000392396 MAGEB6Q8N7X4 407 aa20.77■□□□□ 0.92
TFRC-202ENST00000392396 SLC26A6Q9BXS9 759 aa20.77■□□□□ 0.92
TFRC-202ENST00000392396 ORC3Q9UBD5 711 aaPredicted RBP20.77■□□□□ 0.92
TFRC-202ENST00000392396 OTUD7BQ6GQQ9 843 aa20.77■□□□□ 0.91
TFRC-202ENST00000392396 SEPT12Q8IYM1 358 aa20.76■□□□□ 0.91
TFRC-202ENST00000392396 BMP15O95972 392 aa20.76■□□□□ 0.91
TFRC-202ENST00000392396 CCT2P78371 535 aaKnown RBP20.76■□□□□ 0.91
TFRC-202ENST00000392396 RRP36Q96EU6 259 aaKnown RBP20.76■□□□□ 0.91
TFRC-202ENST00000392396 DCPSQ96C86 337 aaKnown RBP20.76■□□□□ 0.91
TFRC-202ENST00000392396 SLC5A4Q9NY91 659 aa20.76■□□□□ 0.91
TFRC-202ENST00000392396 ARHGEF12Q9NZN5 1544 aa20.76■□□□□ 0.91
TFRC-202ENST00000392396 IDEP14735 1019 aa20.76■□□□□ 0.91
TFRC-202ENST00000392396 SULF1Q8IWU6 871 aa20.76■□□□□ 0.91
TFRC-202ENST00000392396 ARGLU1Q9NWB6 273 aaPredicted RBP20.76■□□□□ 0.91
TFRC-202ENST00000392396 RTN1Q16799 776 aa20.75■□□□□ 0.91
TFRC-202ENST00000392396 CCDC174Q6PII3 467 aa20.75■□□□□ 0.91
TFRC-202ENST00000392396 NUP62CLQ9H1M0 184 aa20.75■□□□□ 0.91
TFRC-202ENST00000392396 KDM6BO15054 1643 aa20.75■□□□□ 0.91
TFRC-202ENST00000392396 EYA2O00167 538 aa20.75■□□□□ 0.91
TFRC-202ENST00000392396 NAPAP54920 295 aa20.75■□□□□ 0.91
TFRC-202ENST00000392396 CCDC144CPQ8IYA2 1237 aa20.75■□□□□ 0.91
TFRC-202ENST00000392396 APBB1IPQ7Z5R6 666 aaPredicted RBP20.75■□□□□ 0.91
TFRC-202ENST00000392396 RNF214Q8ND24 703 aa20.75■□□□□ 0.91
TFRC-202ENST00000392396 RTL9Q8NET4 1388 aa20.75■□□□□ 0.91
TFRC-202ENST00000392396 RAB3GAP1Q15042 981 aa20.75■□□□□ 0.91
TFRC-202ENST00000392396 MRPL50Q8N5N7 158 aaKnown RBP20.75■□□□□ 0.91
TFRC-202ENST00000392396 CERKQ8TCT0 537 aa20.75■□□□□ 0.91
TFRC-202ENST00000392396 HEATR3Q7Z4Q2 680 aa20.74■□□□□ 0.91
TFRC-202ENST00000392396 JAG2Q9Y219 1238 aa20.74■□□□□ 0.91
TFRC-202ENST00000392396 RNF113AO15541 343 aaKnown RBP20.74■□□□□ 0.91
TFRC-202ENST00000392396 ADGRL2O95490 1459 aa20.74■□□□□ 0.91
TFRC-202ENST00000392396 MLH3Q9UHC1 1453 aa20.74■□□□□ 0.91
TFRC-202ENST00000392396 SMCR8Q8TEV9 937 aaPredicted RBP20.74■□□□□ 0.91
TFRC-202ENST00000392396 MIGA1Q8NAN2 632 aa20.73■□□□□ 0.91
TFRC-202ENST00000392396 RPS8P62241 208 aaKnown RBP20.73■□□□□ 0.91
TFRC-202ENST00000392396 IRX3P78415 501 aaPredicted RBP20.73■□□□□ 0.91
TFRC-202ENST00000392396 DCAF15Q66K64 600 aa20.73■□□□□ 0.91
TFRC-202ENST00000392396 FERMT3Q86UX7 667 aa20.73■□□□□ 0.91
TFRC-202ENST00000392396 CIZ1Q9ULV3 898 aaPredicted RBP20.73■□□□□ 0.91
TFRC-202ENST00000392396 KIF4AO95239 1232 aa20.73■□□□□ 0.91
TFRC-202ENST00000392396 ANKRD44Q8N8A2 993 aa20.73■□□□□ 0.91
TFRC-202ENST00000392396 KDM5DQ9BY66 1539 aa20.73■□□□□ 0.91
TFRC-202ENST00000392396 THRAP3Q9Y2W1 955 aaKnown RBP20.73■□□□□ 0.91
TFRC-202ENST00000392396 SAMD9Q5K651 1589 aa20.73■□□□□ 0.91
TFRC-202ENST00000392396 LOC102724428A0A0B4J2F2 783 aa20.72■□□□□ 0.91
TFRC-202ENST00000392396 SIK1P57059 783 aa20.72■□□□□ 0.91
TFRC-202ENST00000392396 GSE1Q14687 1217 aa20.72■□□□□ 0.91
TFRC-202ENST00000392396 RSPH6AQ9H0K4 717 aa20.72■□□□□ 0.91
TFRC-202ENST00000392396 DNMT1P26358 1616 aaKnown RBP20.72■□□□□ 0.91
TFRC-202ENST00000392396 RBM6P78332 1123 aaKnown RBP20.72■□□□□ 0.91
TFRC-202ENST00000392396 PABPC4Q13310 644 aaKnown RBP eCLIP20.72■□□□□ 0.91
TFRC-202ENST00000392396 TESK2Q96S53 571 aa20.72■□□□□ 0.91
TFRC-202ENST00000392396 KIAA0232Q92628 1395 aa20.72■□□□□ 0.91
TFRC-202ENST00000392396 TSPOAP1O95153 1857 aa20.72■□□□□ 0.91
TFRC-202ENST00000392396 KLF18A0A0U1RQI7 1052 aa20.72■□□□□ 0.91
TFRC-202ENST00000392396 TTC41PQ6P2S7 1318 aa20.72■□□□□ 0.91
TFRC-202ENST00000392396 CALML3P27482 149 aa20.71■□□□□ 0.91
TFRC-202ENST00000392396 PRKG1Q13976 671 aa20.71■□□□□ 0.91
TFRC-202ENST00000392396 ERCC4Q92889 916 aaPredicted RBP20.71■□□□□ 0.91
TFRC-202ENST00000392396 PHACTR3Q96KR7 559 aa20.71■□□□□ 0.91
TFRC-202ENST00000392396 GUCY1B3Q02153 619 aa20.71■□□□□ 0.91
TFRC-202ENST00000392396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.71■□□□□ 0.911e-27■□□□□ 10.9
TFRC-202ENST00000392396 IL13P35225 146 aa20.71■□□□□ 0.91
TFRC-202ENST00000392396 ZNF496Q96IT1 587 aaPredicted RBP20.71■□□□□ 0.91
TFRC-202ENST00000392396 SPC25Q9HBM1 224 aa20.71■□□□□ 0.91
TFRC-202ENST00000392396 PHKG2P15735 406 aa20.7■□□□□ 0.91
TFRC-202ENST00000392396 JAKMIP3Q5VZ66 844 aa20.7■□□□□ 0.91
TFRC-202ENST00000392396 AS3MTQ9HBK9 375 aa20.7■□□□□ 0.91
TFRC-202ENST00000392396 PA2G4Q9UQ80 394 aaKnown RBP20.7■□□□□ 0.91
TFRC-202ENST00000392396 TFCP2Q12800 502 aa20.7■□□□□ 0.9
TFRC-202ENST00000392396 ZNF710Q8N1W2 664 aa20.7■□□□□ 0.9
TFRC-202ENST00000392396 ATP2B4P23634 1241 aa20.7■□□□□ 0.9
TFRC-202ENST00000392396 CACNA2D4Q7Z3S7 1137 aa20.7■□□□□ 0.9
TFRC-202ENST00000392396 TCHPQ9BT92 498 aa20.7■□□□□ 0.9
TFRC-202ENST00000392396 MROH5Q6ZUA9 1318 aa20.69■□□□□ 0.9
TFRC-202ENST00000392396 GNA11P29992 359 aa20.69■□□□□ 0.9
TFRC-202ENST00000392396 LGR6Q9HBX8 967 aa20.69■□□□□ 0.9
TFRC-202ENST00000392396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.69■□□□□ 0.94e-7■□□□□ 8.3
TFRC-202ENST00000392396 NAP1L4Q99733 375 aaKnown RBP20.69■□□□□ 0.9
TFRC-202ENST00000392396 BACH1O14867 736 aa20.69■□□□□ 0.9
TFRC-202ENST00000392396 STX6O43752 255 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms