RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 IFRD2Q12894 506 aaPredicted RBP2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 CBLBQ13191 982 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 RASGRF1Q13972 1273 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 GNASQ5JWF2 1037 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 RC3H1Q5TC82 1133 aaKnown RBP2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 TMEM214Q6NUQ4 689 aaKnown RBP2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 FBXL19Q6PCT2 694 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 C16orf86Q6ZW13 317 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 SV2BQ7L1I2 683 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 SLITRK4Q8IW52 837 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 FAM9AQ8IZU1 332 aaPredicted RBP2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 SYNPOQ8N3V7 929 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 LILRB2Q8N423 598 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 PRPF38AQ8NAV1 312 aaKnown RBP2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 C3orf58Q8NDZ4 430 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 GLIS3Q8NEA6 775 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 RHPN1Q8TCX5 695 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 C7orf43Q8WVR3 580 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 HNRNPLLQ8WVV9 542 aaKnown RBP2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 ANAPC16Q96DE5 110 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 SHDQ96IW2 340 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 SUSD3Q96L08 255 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 RHOVQ96L33 236 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 CEP89Q96ST8 783 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 DNAJC7Q99615 494 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 FEZ1Q99689 392 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 C11orf16Q9NQ32 467 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 ZDHHC3Q9NYG2 299 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 KCNMB2Q9Y691 235 aa2.28□□□□□ -2.04
TRAJ39-201ENST00000390498 CCDC85CA6NKD9 419 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 MEN1O00255 615 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 EREGO14944 169 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 SMAD7O15105 426 aaKnown RBP2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 SIAH2O43255 324 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 ST18O60284 1047 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 CD2BP2O95400 341 aaKnown RBP2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 POLR3DP05423 398 aaPredicted RBP2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 EDN3P14138 238 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 EPB42P16452 691 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 GARTP22102 1010 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 GPC1P35052 558 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 GIPRP48546 466 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 VEGFBP49765 207 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 LMNB2Q03252 620 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 APOBRQ0VD83 1088 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 GRIN2CQ14957 1233 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 TRIP4Q15650 581 aaPredicted RBP2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 DDR2Q16832 855 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 NBPF1Q3BBV0 1214 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 C2orf27AQ580R0 203 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 SNAP47Q5SQN1 464 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 PRPF40BQ6NWY9 871 aaKnown RBP2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 ANKRD13DQ6ZTN6 518 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 Q6ZVU0 165 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 KRT26Q7Z3Y9 468 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 FERMT3Q86UX7 667 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 FMNL3Q8IVF7 1028 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 SMC5Q8IY18 1101 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 CMTR1Q8N1G2 835 aaKnown RBP2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 JMYQ8N9B5 988 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 ANKLE1Q8NAG6 615 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 KDF1Q8NAX2 398 aaPredicted RBP2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 PHC3Q8NDX5 983 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 OR6P1Q8NGX9 317 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 THAP3Q8WTV1 239 aaPredicted RBP2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 JDP2Q8WYK2 163 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 NKD1Q969G9 470 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 RELTQ969Z4 430 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 MARVELD3Q96A59 401 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 HS3ST6Q96QI5 342 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 CEP44Q9C0F1 390 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 CHRDQ9H2X0 955 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 KANSL2Q9H9L4 492 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 ABI2Q9NYB9 513 aaPredicted RBP2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 UBP1Q9NZI7 540 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 TMEM63CQ9P1W3 806 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 G3BP2Q9UN86 482 aaKnown RBP2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 RTCBQ9Y3I0 505 aaKnown RBP2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 TLL2Q9Y6L7 1015 aa2.27□□□□□ -2.05
TRAJ39-201ENST00000390498 TMEM238LA0A1B0GVL6 79 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 A0A1W2PP55 124 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 PPEF1O14829 653 aaPredicted RBP2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 PRC1O43663 620 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 PEX14O75381 377 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 EGFRP00533 1210 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 PF4P02776 101 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 NR3C2P08235 984 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 IMPDH2P12268 514 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 HCLS1P14317 486 aaPredicted RBP2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 TATP17735 454 aaPredicted RBP2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 CES1P23141 567 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 GGCXP38435 758 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 LIG3P49916 1009 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 FCGRTP55899 365 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 EIF6P56537 245 aaKnown RBP2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 TBX4P57082 545 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 RPS26P62854 115 aaKnown RBP2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 SQSTM1Q13501 440 aa2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 CAMK2GQ13555 558 aaPredicted RBP2.26□□□□□ -2.05
TRAJ39-201ENST00000390498 TCEA2Q15560 299 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms