RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 IGFBP6P24592 240 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 DNAJB2P25686 324 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TARSP26639 723 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 VARSP26640 1264 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PDE4AP27815 886 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ITPKBP27987 946 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SSFA2P28290 1259 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MSX1P28360 303 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 LTKP29376 864 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 WEE1P30291 646 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 HOXC13P31276 330 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TLX1P31314 330 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 INPP5BP32019 993 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SSTR3P32745 418 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TRHRP34981 398 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 GPC1P35052 558 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 NOS2P35228 1153 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ADRA1BP35368 520 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 GJA5P36382 358 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SCNN1AP37088 669 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ATP6V1AP38606 617 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CAP2P40123 477 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CD96P40200 585 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MPLP40238 635 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ABL2P42684 1182 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 GATA4P43694 442 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 IREB2P48200 963 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 RFX5P48382 616 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 KRT6CP48668 564 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CDK8P49336 464 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 THBS3P49746 956 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 COMPP49747 757 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CLK3P49761 638 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 VASPP50552 380 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TOB1P50616 345 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 RNF144AP50876 292 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 AFF1P51825 1210 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CDR1P51861 262 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PRELPP51888 382 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 HNRNPMP52272 730 aaKnown RBP eCLIP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 RABGGTBP53611 331 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 EPHA5P54756 1037 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 EPHB4P54760 987 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SLURP1P55000 103 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MLLT6P55198 1093 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 BRPF1P55201 1214 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 GP2P55259 537 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 OXCT1P55809 520 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 WNT7BP56706 349 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SIK1P57059 783 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 WDR4P57081 412 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PROK1P58294 105 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 NLRP6P59044 892 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 LINC00205P59089 165 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ERVFC1P60507 584 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PPP4CP60510 307 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 COPS2P61201 443 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 HNRNPKP61978 463 aaKnown RBP eCLIP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TRA2BP62995 288 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ERVK-9P63128 1117 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 YBX1P67809 324 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ADAM8P78325 824 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CLDN10P78369 228 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ADAM17P78536 824 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 HTRA3P83110 453 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 DGCR2P98153 550 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SLC25A3Q00325 362 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MDM2Q00987 491 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 POU4F1Q01851 419 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TAGLNQ01995 201 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 NHLH1Q02575 133 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TEKQ02763 1124 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CENPCQ03188 943 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MVKQ03426 396 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PRB3Q04118 309 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 HGFACQ04756 655 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CTDSPL2Q05D32 466 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PTPN11Q06124 597 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TYRO3Q06418 890 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 DDR1Q08345 913 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ZNF252P-AS1Q0IIN9 211 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 FUT2Q10981 343 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SCAPQ12770 1279 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 EFEMP1Q12805 493 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 POU4F2Q12837 409 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MAP4K2Q12851 820 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MAP3K12Q12852 859 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 NFIAQ12857 509 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 FOXF2Q12947 444 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 FOXC1Q12948 553 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 FOXI1Q12951 378 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 MKRN3Q13064 507 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TRAF3Q13114 568 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 KLF10Q13118 480 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SEMA3FQ13275 785 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 NR5A1Q13285 461 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CLN3Q13286 438 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PTK7Q13308 1070 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CDK5R2Q13319 367 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 NNTQ13423 1086 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms