RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 SERTAD1Q9UHV2 236 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 PRR12Q9ULL5 1215 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 PCDHGC4Q9Y5F7 938 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 NPATQ14207 1427 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 CNTLNQ9NXG0 1405 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 ZNF142P52746 1687 aaPredicted RBP3.42□□□□□ -1.86
TRAV41-201ENST00000390468 SPATA31D1Q6ZQQ2 1576 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 CENPJQ9HC77 1338 aaPredicted RBP3.42□□□□□ -1.86
TRAV41-201ENST00000390468 WASHC2CQ9Y4E1 1318 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 KNDC1Q76NI1 1749 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 COL17A1Q9UMD9 1497 aaPredicted RBP3.41□□□□□ -1.86
TRAV41-201ENST00000390468 NEXMIFQ5QGS0 1516 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 ADAMTSL3P82987 1691 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 FAM229AH3BQW9 127 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 PPP1R15AO75807 674 aaPredicted RBP3.41□□□□□ -1.86
TRAV41-201ENST00000390468 MAPTP10636 758 aaKnown RBP3.41□□□□□ -1.86
TRAV41-201ENST00000390468 ITGB7P26010 798 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 SLFNL1Q499Z3 407 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 BICDL1Q6ZP65 573 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 FCHSD1Q86WN1 690 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 MTMR14Q8NCE2 650 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 POLR3GLQ9BT43 218 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 GOPCQ9HD26 462 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 SNRKQ9NRH2 765 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 NDFIP2Q9NV92 336 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 HRH3Q9Y5N1 445 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 PARP3Q9Y6F1 533 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 PTPRTO14522 1441 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 ARHGAP31Q2M1Z3 1444 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 UHRF1BP1Q6BDS2 1440 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 ITSN1Q15811 1721 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 MYOM2P54296 1465 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 PLA2R1Q13018 1463 aa3.41□□□□□ -1.86
TRAV41-201ENST00000390468 MYOM1P52179 1685 aa3.4□□□□□ -1.86
TRAV41-201ENST00000390468 KIF20BQ96Q89 1820 aa3.4□□□□□ -1.86
TRAV41-201ENST00000390468 A0A1W2PNR3 127 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 TATP17735 454 aaPredicted RBP3.4□□□□□ -1.87
TRAV41-201ENST00000390468 ATP4AP20648 1035 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 PTMSP20962 102 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 GDF10P55107 478 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 USP4Q13107 963 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 NBPF1Q3BBV0 1214 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 PRAG1Q86YV5 1406 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 TEX2Q8IWB9 1127 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 DHX37Q8IY37 1157 aaKnown RBP3.4□□□□□ -1.87
TRAV41-201ENST00000390468 L3MBTL2Q969R5 705 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 TRIM11Q96F44 468 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 IPO9Q96P70 1041 aaKnown RBP3.4□□□□□ -1.87
TRAV41-201ENST00000390468 NIFKQ9BYG3 293 aaKnown RBP3.4□□□□□ -1.87
TRAV41-201ENST00000390468 CRISPLD1Q9H336 500 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 CABP1Q9NZU7 370 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 ANKRD26Q9UPS8 1709 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 SETBP1Q9Y6X0 1596 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 RGPD8O14715 1765 aaPredicted RBP3.4□□□□□ -1.87
TRAV41-201ENST00000390468 ERVK-7P63135 1459 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 WASHC2AQ641Q2 1341 aa3.4□□□□□ -1.87
TRAV41-201ENST00000390468 NOS1P29475 1434 aa3.39□□□□□ -1.87
TRAV41-201ENST00000390468 SPATA31E1Q6ZUB1 1445 aa3.39□□□□□ -1.87
TRAV41-201ENST00000390468 APBB1O00213 710 aa3.39□□□□□ -1.87
TRAV41-201ENST00000390468 GPR37L1O60883 481 aa3.39□□□□□ -1.87
TRAV41-201ENST00000390468 APBA3O96018 575 aa3.39□□□□□ -1.87
TRAV41-201ENST00000390468 MLECQ14165 292 aa3.39□□□□□ -1.87
TRAV41-201ENST00000390468 PRRT3Q5FWE3 981 aa3.39□□□□□ -1.87
TRAV41-201ENST00000390468 FTSJ3Q8IY81 847 aaKnown RBP3.39□□□□□ -1.87
TRAV41-201ENST00000390468 MAP7D2Q96T17 732 aa3.39□□□□□ -1.87
TRAV41-201ENST00000390468 DNAAF2Q9NVR5 837 aaKnown RBP3.39□□□□□ -1.87
TRAV41-201ENST00000390468 KLF15Q9UIH9 416 aa3.39□□□□□ -1.87
TRAV41-201ENST00000390468 TBC1D2BQ9UPU7 963 aa3.39□□□□□ -1.87
TRAV41-201ENST00000390468 NRXN3Q9Y4C0 1643 aa3.39□□□□□ -1.87
TRAV41-201ENST00000390468 CHD2O14647 1828 aaKnown RBP3.39□□□□□ -1.87
TRAV41-201ENST00000390468 ROCK2O75116 1388 aaKnown RBP3.38□□□□□ -1.87
TRAV41-201ENST00000390468 MAP2P11137 1827 aaKnown RBP3.38□□□□□ -1.87
TRAV41-201ENST00000390468 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
TRAV41-201ENST00000390468 INHAP05111 366 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 PTMAP06454 111 aaKnown RBP3.38□□□□□ -1.87
TRAV41-201ENST00000390468 TPM2P07951 284 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 SPATA31C1P0DKV0 1188 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 ALAS2P22557 587 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 SCNN1DP51172 638 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 EIF4G2P78344 907 aaKnown RBP eCLIP3.38□□□□□ -1.87
TRAV41-201ENST00000390468 TNP2Q05952 138 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 VAC14Q08AM6 782 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 TBC1D8BQ0IIM8 1120 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 RGL3Q3MIN7 710 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 TAF3Q5VWG9 929 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 RAB44Q7Z6P3 723 aaPredicted RBP3.38□□□□□ -1.87
TRAV41-201ENST00000390468 NBPF11Q86T75 865 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 NLRP8Q86W28 1048 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 DCAF11Q8TEB1 546 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 TRIM44Q96DX7 344 aaPredicted RBP3.38□□□□□ -1.87
TRAV41-201ENST00000390468 KRTAP9-2Q9BYQ4 174 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 PDCL3Q9H2J4 239 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 PNNQ9H307 717 aaKnown RBP3.38□□□□□ -1.87
TRAV41-201ENST00000390468 CHMP4BQ9H444 224 aaKnown RBP3.38□□□□□ -1.87
TRAV41-201ENST00000390468 STRN4Q9NRL3 753 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 TPSG1Q9NRR2 321 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 HCN2Q9UL51 889 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 AKAP12Q02952 1782 aa3.38□□□□□ -1.87
TRAV41-201ENST00000390468 CEP170BQ9Y4F5 1589 aaPredicted RBP3.38□□□□□ -1.87
TRAV41-201ENST00000390468 USP47Q96K76 1375 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms