RNA–Protein interactions for RNA: ENST00000390443.3

TRAV8-6-201, Transcript of T cell receptor alpha variable 8-6, humanhuman

APPRIS P1 BASIC

Gene TRAV8-6, Length 561 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6-201ENST00000390443 KIF4BQ2VIQ3 1234 aa12□□□□□ -0.49
TRAV8-6-201ENST00000390443 DCAF8Q5TAQ9 597 aa12□□□□□ -0.49
TRAV8-6-201ENST00000390443 SULF1Q8IWU6 871 aa12□□□□□ -0.49
TRAV8-6-201ENST00000390443 TBC1D16Q8TBP0 767 aa12□□□□□ -0.49
TRAV8-6-201ENST00000390443 ZC3H12CQ9C0D7 883 aaKnown RBP12□□□□□ -0.49
TRAV8-6-201ENST00000390443 DBF4Q9UBU7 674 aaPredicted RBP12□□□□□ -0.49
TRAV8-6-201ENST00000390443 TRPA1O75762 1119 aa11.99□□□□□ -0.49
TRAV8-6-201ENST00000390443 RPS8P62241 208 aaKnown RBP11.99□□□□□ -0.49
TRAV8-6-201ENST00000390443 RALBP1Q15311 655 aa11.99□□□□□ -0.49
TRAV8-6-201ENST00000390443 GGA3Q9NZ52 723 aa11.99□□□□□ -0.49
TRAV8-6-201ENST00000390443 ANKIB1Q9P2G1 1089 aa11.99□□□□□ -0.49
TRAV8-6-201ENST00000390443 RTL9Q8NET4 1388 aa11.99□□□□□ -0.49
TRAV8-6-201ENST00000390443 DUOX1Q9NRD9 1551 aa11.99□□□□□ -0.49
TRAV8-6-201ENST00000390443 DLG5Q8TDM6 1919 aa11.99□□□□□ -0.49
TRAV8-6-201ENST00000390443 TRPM7Q96QT4 1865 aa11.98□□□□□ -0.49
TRAV8-6-201ENST00000390443 ASTN2O75129 1339 aaPredicted RBP11.98□□□□□ -0.49
TRAV8-6-201ENST00000390443 UFL1O94874 794 aa11.98□□□□□ -0.49
TRAV8-6-201ENST00000390443 HYPKQ9NX55 129 aa11.98□□□□□ -0.49
TRAV8-6-201ENST00000390443 RNF186Q9NXI6 227 aa11.98□□□□□ -0.49
TRAV8-6-201ENST00000390443 SAGE1Q9NXZ1 904 aa11.98□□□□□ -0.49
TRAV8-6-201ENST00000390443 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
TRAV8-6-201ENST00000390443 VIL1P09327 827 aaKnown RBP11.97□□□□□ -0.49
TRAV8-6-201ENST00000390443 HOXB7P09629 217 aa11.97□□□□□ -0.49
TRAV8-6-201ENST00000390443 DUSP27Q5VZP5 1158 aa11.97□□□□□ -0.49
TRAV8-6-201ENST00000390443 RIC3Q7Z5B4 369 aa11.97□□□□□ -0.49
TRAV8-6-201ENST00000390443 RUNDC1Q96C34 613 aa11.97□□□□□ -0.49
TRAV8-6-201ENST00000390443 CDCA5Q96FF9 252 aa11.97□□□□□ -0.49
TRAV8-6-201ENST00000390443 SEC31BQ9NQW1 1179 aa11.97□□□□□ -0.49
TRAV8-6-201ENST00000390443 GGA1Q9UJY5 639 aa11.97□□□□□ -0.49
TRAV8-6-201ENST00000390443 SLC10A3P09131 477 aa11.96□□□□□ -0.49
TRAV8-6-201ENST00000390443 SOX10P56693 466 aa11.96□□□□□ -0.49
TRAV8-6-201ENST00000390443 GOLGA2Q08379 1002 aa11.96□□□□□ -0.49
TRAV8-6-201ENST00000390443 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
TRAV8-6-201ENST00000390443 SCARF1Q14162 830 aa11.96□□□□□ -0.49
TRAV8-6-201ENST00000390443 WDR43Q15061 677 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAV8-6-201ENST00000390443 ANGEL2Q5VTE6 544 aaKnown RBP11.96□□□□□ -0.49
TRAV8-6-201ENST00000390443 ZBTB38Q8NAP3 1195 aaPredicted RBP11.96□□□□□ -0.49
TRAV8-6-201ENST00000390443 CCDC85AQ96PX6 553 aaPredicted RBP11.96□□□□□ -0.49
TRAV8-6-201ENST00000390443 CSRNP1Q96S65 589 aa11.96□□□□□ -0.49
TRAV8-6-201ENST00000390443 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
TRAV8-6-201ENST00000390443 HSP90B1P14625 803 aaKnown RBP11.95□□□□□ -0.5
TRAV8-6-201ENST00000390443 ZNF280AP59817 542 aaPredicted RBP11.95□□□□□ -0.5
TRAV8-6-201ENST00000390443 CCDC152Q4G0S7 254 aa11.95□□□□□ -0.5
TRAV8-6-201ENST00000390443 RSBN1LQ6PCB5 846 aaPredicted RBP11.95□□□□□ -0.5
TRAV8-6-201ENST00000390443 JARID2Q92833 1246 aaPredicted RBP11.95□□□□□ -0.5
TRAV8-6-201ENST00000390443 MYD88Q99836 296 aa11.95□□□□□ -0.5
TRAV8-6-201ENST00000390443 USP17L8P0C7I0 530 aa11.94□□□□□ -0.5
TRAV8-6-201ENST00000390443 RASAL3Q86YV0 1011 aa11.94□□□□□ -0.5
TRAV8-6-201ENST00000390443 AGBL3Q8NEM8 1001 aa11.94□□□□□ -0.5
TRAV8-6-201ENST00000390443 MBIPQ9NS73 344 aa11.94□□□□□ -0.5
TRAV8-6-201ENST00000390443 MYBBP1AQ9BQG0 1328 aaKnown RBP11.93□□□□□ -0.5
TRAV8-6-201ENST00000390443 ANKRD36CQ5JPF3 1778 aa11.93□□□□□ -0.5
TRAV8-6-201ENST00000390443 ELL2O00472 640 aaPredicted RBP11.93□□□□□ -0.5
TRAV8-6-201ENST00000390443 CTU1Q7Z7A3 348 aaKnown RBP11.93□□□□□ -0.5
TRAV8-6-201ENST00000390443 REM2Q8IYK8 340 aaPredicted RBP11.93□□□□□ -0.5
TRAV8-6-201ENST00000390443 PHAXQ9H814 394 aaKnown RBP11.93□□□□□ -0.5
TRAV8-6-201ENST00000390443 MYOZ2Q9NPC6 264 aa11.93□□□□□ -0.5
TRAV8-6-201ENST00000390443 ADAMTS8Q9UP79 889 aa11.93□□□□□ -0.5
TRAV8-6-201ENST00000390443 SCAF8Q9UPN6 1271 aaKnown RBP11.93□□□□□ -0.5
TRAV8-6-201ENST00000390443 COL4A1P02462 1669 aa11.93□□□□□ -0.5
TRAV8-6-201ENST00000390443 LAMB2P55268 1798 aa11.92□□□□□ -0.5
TRAV8-6-201ENST00000390443 LRRC37AA6NMS7 1700 aa11.92□□□□□ -0.5
TRAV8-6-201ENST00000390443 PDE8AO60658 829 aa11.92□□□□□ -0.5
TRAV8-6-201ENST00000390443 FKBP1BP68106 108 aa11.92□□□□□ -0.5
TRAV8-6-201ENST00000390443 MOB2Q70IA6 237 aa11.92□□□□□ -0.5
TRAV8-6-201ENST00000390443 ANKRD18AQ8IVF6 992 aa11.92□□□□□ -0.5
TRAV8-6-201ENST00000390443 CCDC191Q8NCU4 936 aa11.92□□□□□ -0.5
TRAV8-6-201ENST00000390443 CWC25Q9NXE8 425 aaPredicted RBP11.92□□□□□ -0.5
TRAV8-6-201ENST00000390443 CASP8AP2Q9UKL3 1982 aa11.92□□□□□ -0.5
TRAV8-6-201ENST00000390443 XDHP47989 1333 aa11.91□□□□□ -0.5
TRAV8-6-201ENST00000390443 USP17L3A6NCW0 530 aa11.91□□□□□ -0.5
TRAV8-6-201ENST00000390443 USP17L4A6NCW7 530 aa11.91□□□□□ -0.5
TRAV8-6-201ENST00000390443 UBE2Q2LH0YL09 131 aa11.91□□□□□ -0.5
TRAV8-6-201ENST00000390443 PCCAP05165 728 aaPredicted RBP11.91□□□□□ -0.5
TRAV8-6-201ENST00000390443 ATP2B4P23634 1241 aa11.91□□□□□ -0.5
TRAV8-6-201ENST00000390443 DDX10Q13206 875 aaKnown RBP11.91□□□□□ -0.5
TRAV8-6-201ENST00000390443 TTLL12Q14166 644 aaPredicted RBP11.91□□□□□ -0.5
TRAV8-6-201ENST00000390443 PRAMEF18Q5VWM3 479 aa11.91□□□□□ -0.5
TRAV8-6-201ENST00000390443 USP17L1Q7RTZ2 530 aa11.91□□□□□ -0.5
TRAV8-6-201ENST00000390443 PODNQ7Z5L7 613 aa11.91□□□□□ -0.5
TRAV8-6-201ENST00000390443 HDAC9Q9UKV0 1011 aa11.91□□□□□ -0.5
TRAV8-6-201ENST00000390443 TAF1P21675 1872 aa11.91□□□□□ -0.5
TRAV8-6-201ENST00000390443 PITPNM2Q9BZ72 1349 aa11.9□□□□□ -0.5
TRAV8-6-201ENST00000390443 DDX60Q8IY21 1712 aaKnown RBP11.9□□□□□ -0.5
TRAV8-6-201ENST00000390443 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
TRAV8-6-201ENST00000390443 GMLQ99445 158 aa11.9□□□□□ -0.5
TRAV8-6-201ENST00000390443 WTIPA6NIX2 430 aaPredicted RBP11.89□□□□□ -0.51
TRAV8-6-201ENST00000390443 TBC1D8O95759 1140 aa11.89□□□□□ -0.51
TRAV8-6-201ENST00000390443 DDX58O95786 925 aaKnown RBP11.89□□□□□ -0.51
TRAV8-6-201ENST00000390443 ZNF853P0CG23 659 aa11.89□□□□□ -0.51
TRAV8-6-201ENST00000390443 MKRN3Q13064 507 aaKnown RBP11.89□□□□□ -0.51
TRAV8-6-201ENST00000390443 NBPF9Q3BBW0 867 aa11.89□□□□□ -0.51
TRAV8-6-201ENST00000390443 OGFOD1Q8N543 542 aa11.89□□□□□ -0.51
TRAV8-6-201ENST00000390443 CDC5LQ99459 802 aaKnown RBP11.89□□□□□ -0.51
TRAV8-6-201ENST00000390443 METTL22Q9BUU2 404 aaPredicted RBP11.89□□□□□ -0.51
TRAV8-6-201ENST00000390443 MXD3Q9BW11 206 aa11.89□□□□□ -0.51
TRAV8-6-201ENST00000390443 IFT57Q9NWB7 429 aa11.89□□□□□ -0.51
TRAV8-6-201ENST00000390443 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
TRAV8-6-201ENST00000390443 HPS5Q9UPZ3 1129 aa11.89□□□□□ -0.51
TRAV8-6-201ENST00000390443 TNRC18O15417 2968 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms