RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 CCDC129Q6ZRS4 1044 aa17.76■□□□□ 0.43
SCFD2-201ENST00000388940 NEUROD6Q96NK8 337 aa17.76■□□□□ 0.43
SCFD2-201ENST00000388940 TEX13AQ9BXU3 409 aaPredicted RBP17.76■□□□□ 0.43
SCFD2-201ENST00000388940 CCDC39Q9UFE4 941 aa17.76■□□□□ 0.43
SCFD2-201ENST00000388940 KRT85P78386 507 aa17.75■□□□□ 0.43
SCFD2-201ENST00000388940 ZMYM1Q5SVZ6 1142 aa17.75■□□□□ 0.43
SCFD2-201ENST00000388940 VSIG10Q8N0Z9 540 aa17.75■□□□□ 0.43
SCFD2-201ENST00000388940 GTF3C6Q969F1 213 aa17.75■□□□□ 0.43
SCFD2-201ENST00000388940 TIMM10P62072 90 aa17.75■□□□□ 0.43
SCFD2-201ENST00000388940 CDC37L1Q7L3B6 337 aa17.75■□□□□ 0.43
SCFD2-201ENST00000388940 NHSL1Q5SYE7 1610 aa17.74■□□□□ 0.43
SCFD2-201ENST00000388940 ZNF500O60304 480 aaPredicted RBP17.74■□□□□ 0.43
SCFD2-201ENST00000388940 LRRC24Q50LG9 513 aa17.74■□□□□ 0.43
SCFD2-201ENST00000388940 PLA2G12BQ9BX93 195 aa17.74■□□□□ 0.43
SCFD2-201ENST00000388940 GOLIM4O00461 696 aa17.74■□□□□ 0.43
SCFD2-201ENST00000388940 CHGBP05060 677 aa17.74■□□□□ 0.43
SCFD2-201ENST00000388940 EVA1CP58658 441 aa17.74■□□□□ 0.43
SCFD2-201ENST00000388940 FUCA2Q9BTY2 467 aa17.74■□□□□ 0.43
SCFD2-201ENST00000388940 TMOD3Q9NYL9 352 aa17.74■□□□□ 0.43
SCFD2-201ENST00000388940 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.74■□□□□ 0.43
SCFD2-201ENST00000388940 Q6ZUG5 572 aa17.73■□□□□ 0.43
SCFD2-201ENST00000388940 NAP1L5Q96NT1 182 aaPredicted RBP17.73■□□□□ 0.43
SCFD2-201ENST00000388940 ZKSCAN5Q9Y2L8 839 aa17.73■□□□□ 0.43
SCFD2-201ENST00000388940 A0A1B0GUL7 405 aa17.72■□□□□ 0.43
SCFD2-201ENST00000388940 STRN4Q9NRL3 753 aa17.72■□□□□ 0.43
SCFD2-201ENST00000388940 RNF113AO15541 343 aaKnown RBP17.72■□□□□ 0.43
SCFD2-201ENST00000388940 PCCAP05165 728 aaPredicted RBP17.72■□□□□ 0.43
SCFD2-201ENST00000388940 IFIT1P09914 478 aaKnown RBP17.72■□□□□ 0.43
SCFD2-201ENST00000388940 DHX32Q7L7V1 743 aaKnown RBP17.72■□□□□ 0.43
SCFD2-201ENST00000388940 TTC6Q86TZ1 520 aa17.72■□□□□ 0.43
SCFD2-201ENST00000388940 ZNF594Q96JF6 807 aaPredicted RBP17.72■□□□□ 0.43
SCFD2-201ENST00000388940 LLPHQ9BRT6 129 aaKnown RBP17.72■□□□□ 0.43
SCFD2-201ENST00000388940 SCAND2PQ9GZW5 306 aaPredicted RBP17.72■□□□□ 0.43
SCFD2-201ENST00000388940 CEP126Q9P2H0 1117 aa17.72■□□□□ 0.43
SCFD2-201ENST00000388940 DTNBO60941 627 aa17.71■□□□□ 0.43
SCFD2-201ENST00000388940 CCDC57Q2TAC2 916 aa17.71■□□□□ 0.43
SCFD2-201ENST00000388940 AGXT2Q9BYV1 514 aa17.71■□□□□ 0.43
SCFD2-201ENST00000388940 AKAP2Q9Y2D5 859 aa17.71■□□□□ 0.43
SCFD2-201ENST00000388940 ITGB4P16144 1822 aa17.71■□□□□ 0.43
SCFD2-201ENST00000388940 OFD1O75665 1012 aa17.71■□□□□ 0.43
SCFD2-201ENST00000388940 CSF1RP07333 972 aa17.71■□□□□ 0.43
SCFD2-201ENST00000388940 STK3Q13188 491 aa17.71■□□□□ 0.43
SCFD2-201ENST00000388940 STOX1Q6ZVD7 989 aa17.71■□□□□ 0.43
SCFD2-201ENST00000388940 PUS3Q9BZE2 481 aaKnown RBP17.71■□□□□ 0.43
SCFD2-201ENST00000388940 PFKFB2O60825 505 aa17.7■□□□□ 0.42
SCFD2-201ENST00000388940 EXOSC10Q01780 885 aaKnown RBP17.7■□□□□ 0.42
SCFD2-201ENST00000388940 LRRFIP1Q32MZ4 808 aaKnown RBP17.7■□□□□ 0.42
SCFD2-201ENST00000388940 SMARCC2Q8TAQ2 1214 aa17.7■□□□□ 0.42
SCFD2-201ENST00000388940 HSPD1P10809 573 aaKnown RBP17.7■□□□□ 0.42
SCFD2-201ENST00000388940 KIF6Q6ZMV9 814 aa17.7■□□□□ 0.42
SCFD2-201ENST00000388940 FERMT3Q86UX7 667 aa17.69■□□□□ 0.42
SCFD2-201ENST00000388940 ZBTB38Q8NAP3 1195 aaPredicted RBP17.69■□□□□ 0.42
SCFD2-201ENST00000388940 CCDC9Q9Y3X0 531 aaKnown RBP17.69■□□□□ 0.42
SCFD2-201ENST00000388940 ABCC12Q96J65 1359 aa17.69■□□□□ 0.42
SCFD2-201ENST00000388940 CCDC158Q5M9N0 1113 aa17.68■□□□□ 0.42
SCFD2-201ENST00000388940 PIGBQ92521 554 aa17.68■□□□□ 0.42
SCFD2-201ENST00000388940 MAST3O60307 1309 aa17.68■□□□□ 0.42
SCFD2-201ENST00000388940 CDHR2Q9BYE9 1310 aa17.68■□□□□ 0.42
SCFD2-201ENST00000388940 ZNF335Q9H4Z2 1342 aaPredicted RBP17.68■□□□□ 0.42
SCFD2-201ENST00000388940 STARD3NLO95772 234 aa17.68■□□□□ 0.42
SCFD2-201ENST00000388940 HSP90B1P14625 803 aaKnown RBP17.68■□□□□ 0.42
SCFD2-201ENST00000388940 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.68■□□□□ 0.42
SCFD2-201ENST00000388940 DNAJC10Q8IXB1 793 aa17.68■□□□□ 0.42
SCFD2-201ENST00000388940 FBXL16Q8N461 479 aa17.68■□□□□ 0.42
SCFD2-201ENST00000388940 BRF1Q92994 677 aa17.68■□□□□ 0.42
SCFD2-201ENST00000388940 ZSCAN16Q9H4T2 348 aaPredicted RBP17.68■□□□□ 0.42
SCFD2-201ENST00000388940 JAK2O60674 1132 aa17.67■□□□□ 0.42
SCFD2-201ENST00000388940 ZFYP08048 801 aaPredicted RBP17.67■□□□□ 0.42
SCFD2-201ENST00000388940 HCLS1P14317 486 aaPredicted RBP17.67■□□□□ 0.42
SCFD2-201ENST00000388940 SCRN1Q12765 414 aa17.67■□□□□ 0.42
SCFD2-201ENST00000388940 GIMAP6Q6P9H5 292 aa17.67■□□□□ 0.42
SCFD2-201ENST00000388940 GIGYF2Q6Y7W6 1299 aaKnown RBP17.67■□□□□ 0.42
SCFD2-201ENST00000388940 MYH15Q9Y2K3 1946 aa17.67■□□□□ 0.42
SCFD2-201ENST00000388940 MAP3K15Q6ZN16 1313 aa17.67■□□□□ 0.42
SCFD2-201ENST00000388940 RESTQ13127 1097 aa17.67■□□□□ 0.42
SCFD2-201ENST00000388940 CHMP4CQ96CF2 233 aa17.67■□□□□ 0.42
SCFD2-201ENST00000388940 SPATA32Q96LK8 384 aa17.67■□□□□ 0.42
SCFD2-201ENST00000388940 ASAP1Q9ULH1 1129 aa17.67■□□□□ 0.42
SCFD2-201ENST00000388940 ANKRD36CQ5JPF3 1778 aa17.66■□□□□ 0.42
SCFD2-201ENST00000388940 E7EWF7 191 aa17.66■□□□□ 0.42
SCFD2-201ENST00000388940 FAM173BQ6P4H8 233 aa17.66■□□□□ 0.42
SCFD2-201ENST00000388940 LEO1Q8WVC0 666 aaPredicted RBP17.66■□□□□ 0.42
SCFD2-201ENST00000388940 XAGE2Q96GT9 111 aa17.66■□□□□ 0.42
SCFD2-201ENST00000388940 LRP6O75581 1613 aa17.66■□□□□ 0.42
SCFD2-201ENST00000388940 MYH7P12883 1935 aa17.66■□□□□ 0.42
SCFD2-201ENST00000388940 TERF1P54274 439 aa17.66■□□□□ 0.42
SCFD2-201ENST00000388940 FGD1P98174 961 aa17.66■□□□□ 0.42
SCFD2-201ENST00000388940 SLFNL1Q499Z3 407 aa17.66■□□□□ 0.42
SCFD2-201ENST00000388940 TTC39AQ5SRH9 613 aa17.66■□□□□ 0.42
SCFD2-201ENST00000388940 KDM4AO75164 1064 aa17.65■□□□□ 0.42
SCFD2-201ENST00000388940 CCDC192P0DO97 292 aa17.65■□□□□ 0.42
SCFD2-201ENST00000388940 HMGN5P82970 282 aaKnown RBP17.65■□□□□ 0.42
SCFD2-201ENST00000388940 IFIT5Q13325 482 aaKnown RBP17.65■□□□□ 0.42
SCFD2-201ENST00000388940 HSP90AB3PQ58FF7 597 aa17.65■□□□□ 0.42
SCFD2-201ENST00000388940 MYH3P11055 1940 aa17.65■□□□□ 0.42
SCFD2-201ENST00000388940 DISP2A7MBM2 1401 aa17.65■□□□□ 0.42
SCFD2-201ENST00000388940 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.65■□□□□ 0.42
SCFD2-201ENST00000388940 M0R2C6 588 aa17.64■□□□□ 0.42
SCFD2-201ENST00000388940 TPRNQ4KMQ1 711 aa17.64■□□□□ 0.42
SCFD2-201ENST00000388940 NAA16Q6N069 864 aaPredicted RBP17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms