RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 DEFB115Q30KQ5 88 aa32.77■■■□□ 2.84
KRT18-201ENST00000388835 NEURL1BA8MQ27 555 aa32.76■■■□□ 2.84
KRT18-201ENST00000388835 CTSWP56202 376 aa32.76■■■□□ 2.84
KRT18-201ENST00000388835 FLIIQ13045 1269 aa32.76■■■□□ 2.84
KRT18-201ENST00000388835 ANKRD18AQ8IVF6 992 aa32.76■■■□□ 2.84
KRT18-201ENST00000388835 TRPM4Q8TD43 1214 aa32.76■■■□□ 2.84
KRT18-201ENST00000388835 ZC3H12CQ9C0D7 883 aaKnown RBP32.76■■■□□ 2.84
KRT18-201ENST00000388835 KCNQ5Q9NR82 932 aa32.76■■■□□ 2.84
KRT18-201ENST00000388835 MYH3P11055 1940 aa32.76■■■□□ 2.83
KRT18-201ENST00000388835 PODXL2Q9NZ53 605 aa32.75■■■□□ 2.83
KRT18-201ENST00000388835 GGA1Q9UJY5 639 aa32.75■■■□□ 2.83
KRT18-201ENST00000388835 HIRAP54198 1017 aaPredicted RBP32.75■■■□□ 2.83
KRT18-201ENST00000388835 EXOSC9Q06265 439 aaKnown RBP32.75■■■□□ 2.83
KRT18-201ENST00000388835 MICALL2Q8IY33 904 aa32.75■■■□□ 2.83
KRT18-201ENST00000388835 RASSF10A6NK89 507 aa32.74■■■□□ 2.83
KRT18-201ENST00000388835 H7C1D1 291 aa32.74■■■□□ 2.83
KRT18-201ENST00000388835 FKBP5Q13451 457 aaPredicted RBP32.74■■■□□ 2.83
KRT18-201ENST00000388835 SPEF2Q9C093 1822 aa32.73■■■□□ 2.83
KRT18-201ENST00000388835 G3V3G9 751 aa32.73■■■□□ 2.83
KRT18-201ENST00000388835 VAMP4O75379 141 aa32.73■■■□□ 2.83
KRT18-201ENST00000388835 DCAF8Q5TAQ9 597 aa32.73■■■□□ 2.83
KRT18-201ENST00000388835 UBE3BQ7Z3V4 1068 aa32.73■■■□□ 2.83
KRT18-201ENST00000388835 CACNA1FO60840 1977 aa32.73■■■□□ 2.83
KRT18-201ENST00000388835 TTLL11Q8NHH1 800 aa32.72■■■□□ 2.83
KRT18-201ENST00000388835 GLIS2Q9BZE0 524 aaPredicted RBP32.72■■■□□ 2.83
KRT18-201ENST00000388835 RTL9Q8NET4 1388 aa32.71■■■□□ 2.83
KRT18-201ENST00000388835 CST9Q5W186 159 aa32.71■■■□□ 2.83
KRT18-201ENST00000388835 CDC5LQ99459 802 aaKnown RBP32.71■■■□□ 2.83
KRT18-201ENST00000388835 GREM2Q9H772 168 aa32.71■■■□□ 2.83
KRT18-201ENST00000388835 SPINK5Q9NQ38 1064 aaPredicted RBP32.71■■■□□ 2.83
KRT18-201ENST00000388835 SCN9AQ15858 1988 aa32.7■■■□□ 2.83
KRT18-201ENST00000388835 PAXIP1Q6ZW49 1069 aaPredicted RBP32.7■■■□□ 2.82
KRT18-201ENST00000388835 DPF2Q92785 391 aa32.7■■■□□ 2.82
KRT18-201ENST00000388835 H7C1W4 665 aa32.69■■■□□ 2.82
KRT18-201ENST00000388835 SAMD7Q7Z3H4 446 aa32.69■■■□□ 2.82
KRT18-201ENST00000388835 DNAAF4Q8WXU2 420 aa32.69■■■□□ 2.82
KRT18-201ENST00000388835 PGAP2Q9UHJ9 254 aa32.69■■■□□ 2.82
KRT18-201ENST00000388835 XDHP47989 1333 aa32.69■■■□□ 2.82
KRT18-201ENST00000388835 GCKRQ14397 625 aa32.68■■■□□ 2.82
KRT18-201ENST00000388835 TNS4Q8IZW8 715 aa32.68■■■□□ 2.82
KRT18-201ENST00000388835 ZC3H15Q8WU90 426 aaKnown RBP32.68■■■□□ 2.82
KRT18-201ENST00000388835 WDR33Q9C0J8 1336 aaKnown RBP32.68■■■□□ 2.82
KRT18-201ENST00000388835 FOXN1O15353 648 aa32.67■■■□□ 2.82
KRT18-201ENST00000388835 TBC1D10BQ4KMP7 808 aaPredicted RBP32.67■■■□□ 2.82
KRT18-201ENST00000388835 GRM1Q13255 1194 aa32.66■■■□□ 2.82
KRT18-201ENST00000388835 CELF2O95319 508 aaKnown RBP32.66■■■□□ 2.82
KRT18-201ENST00000388835 RPS12P25398 132 aaKnown RBP32.66■■■□□ 2.82
KRT18-201ENST00000388835 RBM26Q5T8P6 1007 aaKnown RBP32.66■■■□□ 2.82
KRT18-201ENST00000388835 AIDAQ96BJ3 306 aa32.65■■■□□ 2.82
KRT18-201ENST00000388835 MYH16Q9H6N6 1097 aa32.65■■■□□ 2.82
KRT18-201ENST00000388835 ZNF408Q9H9D4 720 aa32.65■■■□□ 2.82
KRT18-201ENST00000388835 EGFRP00533 1210 aa32.64■■■□□ 2.82
KRT18-201ENST00000388835 ATP2B4P23634 1241 aa32.64■■■□□ 2.82
KRT18-201ENST00000388835 WTIPA6NIX2 430 aaPredicted RBP32.63■■■□□ 2.81
KRT18-201ENST00000388835 CDC37L1Q7L3B6 337 aa32.63■■■□□ 2.81
KRT18-201ENST00000388835 LINS1Q8NG48 757 aa32.63■■■□□ 2.81
KRT18-201ENST00000388835 BSDC1Q9NW68 430 aaPredicted RBP32.63■■■□□ 2.81
KRT18-201ENST00000388835 MINPP1Q9UNW1 487 aa32.63■■■□□ 2.81
KRT18-201ENST00000388835 TLL2Q9Y6L7 1015 aa32.63■■■□□ 2.81
KRT18-201ENST00000388835 VIL1P09327 827 aaKnown RBP32.62■■■□□ 2.81
KRT18-201ENST00000388835 CYP4F22Q6NT55 531 aa32.62■■■□□ 2.81
KRT18-201ENST00000388835 CAPNS2Q96L46 248 aa32.62■■■□□ 2.81
KRT18-201ENST00000388835 POLR2AP24928 1970 aaKnown RBP32.62■■■□□ 2.81
KRT18-201ENST00000388835 USP48Q86UV5 1035 aa32.62■■■□□ 2.81
KRT18-201ENST00000388835 F6X3S4 739 aa32.61■■■□□ 2.81
KRT18-201ENST00000388835 CASP7P55210 303 aa32.61■■■□□ 2.81
KRT18-201ENST00000388835 WBP1LQ9NX94 342 aa32.61■■■□□ 2.81
KRT18-201ENST00000388835 DLK2Q6UY11 383 aa32.6■■■□□ 2.81
KRT18-201ENST00000388835 PLA2G12BQ9BX93 195 aa32.6■■■□□ 2.81
KRT18-201ENST00000388835 IGHMBP2P38935 993 aaKnown RBP32.59■■■□□ 2.81
KRT18-201ENST00000388835 FAM161AQ3B820 660 aa32.59■■■□□ 2.81
KRT18-201ENST00000388835 ITGA6P23229 1130 aa32.58■■■□□ 2.81
KRT18-201ENST00000388835 ECE1P42892 770 aa32.58■■■□□ 2.81
KRT18-201ENST00000388835 PSME4Q14997 1843 aa32.58■■■□□ 2.81
KRT18-201ENST00000388835 KIF4BQ2VIQ3 1234 aa32.58■■■□□ 2.81
KRT18-201ENST00000388835 CAPN15O75808 1086 aa32.57■■■□□ 2.8
KRT18-201ENST00000388835 CTCFP49711 727 aaPredicted RBP32.57■■■□□ 2.8
KRT18-201ENST00000388835 CCT4P50991 539 aaKnown RBP32.57■■■□□ 2.8
KRT18-201ENST00000388835 RSBN1LQ6PCB5 846 aaPredicted RBP32.57■■■□□ 2.8
KRT18-201ENST00000388835 SAPCD2Q86UD0 394 aa32.57■■■□□ 2.8
KRT18-201ENST00000388835 KRT26Q7Z3Y9 468 aa32.56■■■□□ 2.8
KRT18-201ENST00000388835 MAP2K1Q02750 393 aaPredicted RBP32.55■■■□□ 2.8
KRT18-201ENST00000388835 MED23Q9ULK4 1368 aa32.55■■■□□ 2.8
KRT18-201ENST00000388835 CSF1RP07333 972 aa32.54■■■□□ 2.8
KRT18-201ENST00000388835 BEND3Q5T5X7 828 aa32.54■■■□□ 2.8
KRT18-201ENST00000388835 DCPSQ96C86 337 aaKnown RBP32.54■■■□□ 2.8
KRT18-201ENST00000388835 MPHOSPH8Q99549 860 aa32.54■■■□□ 2.8
KRT18-201ENST00000388835 PODNQ7Z5L7 613 aa32.53■■■□□ 2.8
KRT18-201ENST00000388835 AGBL3Q8NEM8 1001 aa32.53■■■□□ 2.8
KRT18-201ENST00000388835 USP17L3A6NCW0 530 aa32.53■■■□□ 2.8
KRT18-201ENST00000388835 USP17L4A6NCW7 530 aa32.53■■■□□ 2.8
KRT18-201ENST00000388835 ADM5C9JUS6 153 aa32.53■■■□□ 2.8
KRT18-201ENST00000388835 USP17L1Q7RTZ2 530 aa32.53■■■□□ 2.8
KRT18-201ENST00000388835 THSD7BQ9C0I4 1608 aa32.52■■■□□ 2.8
KRT18-201ENST00000388835 AOC2O75106 756 aa32.52■■■□□ 2.8
KRT18-201ENST00000388835 ASTN2O75129 1339 aaPredicted RBP32.51■■■□□ 2.8
KRT18-201ENST00000388835 LBX1P52954 281 aa32.51■■■□□ 2.79
KRT18-201ENST00000388835 FBXW7Q969H0 707 aa32.51■■■□□ 2.79
KRT18-201ENST00000388835 GGA3Q9NZ52 723 aa32.51■■■□□ 2.79
KRT18-201ENST00000388835 CHMP3Q9Y3E7 222 aa32.51■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms