RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 PAPPAQ13219 1627 aa16.5■□□□□ 0.23
NEK4-202ENST00000383721 PTMAP06454 111 aaKnown RBP16.5■□□□□ 0.23
NEK4-202ENST00000383721 PSMA5P28066 241 aa16.5■□□□□ 0.23
NEK4-202ENST00000383721 KCNQ4P56696 695 aa16.5■□□□□ 0.23
NEK4-202ENST00000383721 ILDR2Q71H61 639 aa16.5■□□□□ 0.23
NEK4-202ENST00000383721 LRP10Q7Z4F1 713 aa16.5■□□□□ 0.23
NEK4-202ENST00000383721 ZNF589Q86UQ0 364 aaPredicted RBP16.5■□□□□ 0.23
NEK4-202ENST00000383721 USP25Q9UHP3 1055 aa16.5■□□□□ 0.23
NEK4-202ENST00000383721 CSPP1Q1MSJ5 1256 aa16.5■□□□□ 0.23
NEK4-202ENST00000383721 EDC3Q96F86 508 aaKnown RBP16.5■□□□□ 0.23
NEK4-202ENST00000383721 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
NEK4-202ENST00000383721 FUCA2Q9BTY2 467 aa16.5■□□□□ 0.23
NEK4-202ENST00000383721 UBE2Q2Q8WVN8 375 aa16.49■□□□□ 0.23
NEK4-202ENST00000383721 JARID2Q92833 1246 aaPredicted RBP16.49■□□□□ 0.23
NEK4-202ENST00000383721 SLC4A9Q96Q91 983 aa16.49■□□□□ 0.23
NEK4-202ENST00000383721 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.49■□□□□ 0.23
NEK4-202ENST00000383721 KCPQ6ZWJ8 1503 aa16.49■□□□□ 0.23
NEK4-202ENST00000383721 C5P01031 1676 aa16.49■□□□□ 0.23
NEK4-202ENST00000383721 RNF20Q5VTR2 975 aa16.49■□□□□ 0.23
NEK4-202ENST00000383721 GIMAP6Q6P9H5 292 aa16.49■□□□□ 0.23
NEK4-202ENST00000383721 BLOC1S2Q6QNY1 142 aa16.49■□□□□ 0.23
NEK4-202ENST00000383721 COPRSQ9NQ92 184 aa16.49■□□□□ 0.23
NEK4-202ENST00000383721 USP16Q9Y5T5 823 aa16.49■□□□□ 0.23
NEK4-202ENST00000383721 PALLDQ8WX93 1383 aa16.49■□□□□ 0.23
NEK4-202ENST00000383721 RPS6KB1P23443 525 aa16.48■□□□□ 0.23
NEK4-202ENST00000383721 RFX5P48382 616 aaPredicted RBP16.48■□□□□ 0.23
NEK4-202ENST00000383721 LARP1BQ659C4 914 aaKnown RBP16.48■□□□□ 0.23
NEK4-202ENST00000383721 ANKRD13DQ6ZTN6 518 aa16.48■□□□□ 0.23
NEK4-202ENST00000383721 PIP4K2AP48426 406 aaPredicted RBP16.48■□□□□ 0.23
NEK4-202ENST00000383721 TOB2Q14106 344 aaPredicted RBP16.48■□□□□ 0.23
NEK4-202ENST00000383721 DBNLQ9UJU6 430 aaKnown RBP16.48■□□□□ 0.23
NEK4-202ENST00000383721 TAF5LO75529 589 aa16.47■□□□□ 0.23
NEK4-202ENST00000383721 PTPN12Q05209 780 aaKnown RBP16.47■□□□□ 0.23
NEK4-202ENST00000383721 CDC37L1Q7L3B6 337 aa16.47■□□□□ 0.23
NEK4-202ENST00000383721 ALDH8A1Q9H2A2 487 aaPredicted RBP16.47■□□□□ 0.23
NEK4-202ENST00000383721 TSGA10IPQ3SY00 556 aa16.47■□□□□ 0.23
NEK4-202ENST00000383721 UBR2Q8IWV8 1755 aa16.47■□□□□ 0.23
NEK4-202ENST00000383721 ADCY5O95622 1261 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 ATP5JP18859 108 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 ANKRD1Q15327 319 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 TTC6Q86TZ1 520 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 MPNDQ8N594 471 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 FMNL2Q96PY5 1086 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 COL15A1P39059 1388 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 APBA3O96018 575 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 TFCP2Q12800 502 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 TNNI3KQ59H18 835 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 FAM173BQ6P4H8 233 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 FERMT3Q86UX7 667 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 KLHL34Q8N239 644 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 FPGT-TNNI3KV9GXZ4 949 aa16.46■□□□□ 0.23
NEK4-202ENST00000383721 SNRPA1P09661 255 aaKnown RBP16.45■□□□□ 0.22
NEK4-202ENST00000383721 RABL6Q3YEC7 729 aaPredicted RBP16.45■□□□□ 0.22
NEK4-202ENST00000383721 USPL1Q5W0Q7 1092 aa16.45■□□□□ 0.22
NEK4-202ENST00000383721 HMG20BQ9P0W2 317 aa16.45■□□□□ 0.22
NEK4-202ENST00000383721 LOC102724428A0A0B4J2F2 783 aa16.45■□□□□ 0.22
NEK4-202ENST00000383721 SIK1P57059 783 aa16.45■□□□□ 0.22
NEK4-202ENST00000383721 NDUFB9Q9Y6M9 179 aa16.45■□□□□ 0.22
NEK4-202ENST00000383721 KDM4AO75164 1064 aa16.44■□□□□ 0.22
NEK4-202ENST00000383721 PDIA4P13667 645 aaKnown RBP16.44■□□□□ 0.22
NEK4-202ENST00000383721 PDCP20941 246 aa16.44■□□□□ 0.22
NEK4-202ENST00000383721 KIAA2012Q0VF49 1180 aa16.44■□□□□ 0.22
NEK4-202ENST00000383721 UBE3BQ7Z3V4 1068 aa16.44■□□□□ 0.22
NEK4-202ENST00000383721 TNS1Q9HBL0 1735 aaKnown RBP16.44■□□□□ 0.22
NEK4-202ENST00000383721 CHGBP05060 677 aa16.44■□□□□ 0.22
NEK4-202ENST00000383721 KRT85P78386 507 aa16.44■□□□□ 0.22
NEK4-202ENST00000383721 ZNF830Q96NB3 372 aaPredicted RBP16.44■□□□□ 0.22
NEK4-202ENST00000383721 ATP5J2-PTCD1G3V325 749 aa16.43■□□□□ 0.22
NEK4-202ENST00000383721 ITPK1Q13572 414 aa16.43■□□□□ 0.22
NEK4-202ENST00000383721 DNAJC10Q8IXB1 793 aa16.43■□□□□ 0.22
NEK4-202ENST00000383721 SMARCC1Q92922 1105 aaPredicted RBP16.43■□□□□ 0.22
NEK4-202ENST00000383721 ATP6V1AP38606 617 aa16.43■□□□□ 0.22
NEK4-202ENST00000383721 STK3Q13188 491 aa16.42■□□□□ 0.22
NEK4-202ENST00000383721 PROM2Q8N271 834 aa16.42■□□□□ 0.22
NEK4-202ENST00000383721 DBNDD2Q9BQY9 259 aa16.42■□□□□ 0.22
NEK4-202ENST00000383721 ELP1O95163 1332 aa16.42■□□□□ 0.22
NEK4-202ENST00000383721 A0A087WZG4 1122 aa16.42■□□□□ 0.22
NEK4-202ENST00000383721 AP5Z1O43299 807 aa16.42■□□□□ 0.22
NEK4-202ENST00000383721 CASP7P55210 303 aa16.42■□□□□ 0.22
NEK4-202ENST00000383721 SEC62Q99442 399 aaKnown RBP16.42■□□□□ 0.22
NEK4-202ENST00000383721 LRRC4BQ9NT99 713 aa16.42■□□□□ 0.22
NEK4-202ENST00000383721 ZNF609O15014 1411 aa16.42■□□□□ 0.22
NEK4-202ENST00000383721 UQCRHLA0A096LP55 91 aa16.41■□□□□ 0.22
NEK4-202ENST00000383721 UQCRHP07919 91 aa16.41■□□□□ 0.22
NEK4-202ENST00000383721 LIG1P18858 919 aa16.41■□□□□ 0.22
NEK4-202ENST00000383721 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
NEK4-202ENST00000383721 DEFB132Q7Z7B7 95 aa16.41■□□□□ 0.22
NEK4-202ENST00000383721 TTC12Q9H892 705 aaPredicted RBP16.41■□□□□ 0.22
NEK4-202ENST00000383721 EN1Q05925 392 aaPredicted RBP16.41■□□□□ 0.22
NEK4-202ENST00000383721 KRT32Q14532 448 aa16.41■□□□□ 0.22
NEK4-202ENST00000383721 DNAJC2Q99543 621 aaKnown RBP16.41■□□□□ 0.22
NEK4-202ENST00000383721 HAUS7Q99871 368 aa16.41■□□□□ 0.22
NEK4-202ENST00000383721 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
NEK4-202ENST00000383721 NEK1Q96PY6 1258 aa16.4■□□□□ 0.22
NEK4-202ENST00000383721 CHMP3Q9Y3E7 222 aa16.4■□□□□ 0.22
NEK4-202ENST00000383721 RFX7Q2KHR2 1363 aa16.4■□□□□ 0.22
NEK4-202ENST00000383721 PIBF1Q8WXW3 757 aa16.4■□□□□ 0.22
NEK4-202ENST00000383721 TFIP11Q9UBB9 837 aaKnown RBP16.4■□□□□ 0.22
NEK4-202ENST00000383721 LY75O60449 1722 aa16.4■□□□□ 0.22
NEK4-202ENST00000383721 TJP1Q07157 1748 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms