RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 ZBTB3Q9H5J0 574 aa14.39□□□□□ -0.11
RFC3-201ENST00000380071 CWC25Q9NXE8 425 aaPredicted RBP14.39□□□□□ -0.11
RFC3-201ENST00000380071 SPATA31A3Q5VYP0 1347 aa14.39□□□□□ -0.11
RFC3-201ENST00000380071 UQCRHLA0A096LP55 91 aa14.39□□□□□ -0.11
RFC3-201ENST00000380071 UQCRHP07919 91 aa14.39□□□□□ -0.11
RFC3-201ENST00000380071 PGBD1Q96JS3 809 aa14.39□□□□□ -0.11
RFC3-201ENST00000380071 PAG1Q9NWQ8 432 aa14.39□□□□□ -0.11
RFC3-201ENST00000380071 TNS3Q68CZ2 1445 aa14.38□□□□□ -0.11
RFC3-201ENST00000380071 MAP3K11Q16584 847 aa14.38□□□□□ -0.11
RFC3-201ENST00000380071 MRVI1Q9Y6F6 885 aa14.38□□□□□ -0.11
RFC3-201ENST00000380071 PKD1L3Q7Z443 1732 aa14.38□□□□□ -0.11
RFC3-201ENST00000380071 RFX7Q2KHR2 1363 aa14.38□□□□□ -0.11
RFC3-201ENST00000380071 GOLGA6L4A6NEF3 574 aa14.37□□□□□ -0.11
RFC3-201ENST00000380071 RESTQ13127 1097 aa14.37□□□□□ -0.11
RFC3-201ENST00000380071 PUS3Q9BZE2 481 aaKnown RBP14.37□□□□□ -0.11
RFC3-201ENST00000380071 SH3TC1Q8TE82 1336 aa14.37□□□□□ -0.11
RFC3-201ENST00000380071 ABCC6O95255 1503 aa14.37□□□□□ -0.11
RFC3-201ENST00000380071 FGD1P98174 961 aa14.37□□□□□ -0.11
RFC3-201ENST00000380071 TYRO3Q06418 890 aa14.37□□□□□ -0.11
RFC3-201ENST00000380071 NOLC1Q14978 699 aaKnown RBP eCLIP14.37□□□□□ -0.11
RFC3-201ENST00000380071 ZCRB1Q8TBF4 217 aaKnown RBP14.37□□□□□ -0.11
RFC3-201ENST00000380071 PIBF1Q8WXW3 757 aa14.37□□□□□ -0.11
RFC3-201ENST00000380071 STRCP1A6NGW2 1772 aa14.37□□□□□ -0.11
RFC3-201ENST00000380071 NR1I2O75469 434 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 FOSBP53539 338 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 KLHL34Q8N239 644 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 TNMDQ9H2S6 317 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 H3BQV1 296 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 PPFIA3O75145 1194 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 IL15P40933 162 aaPredicted RBP14.36□□□□□ -0.11
RFC3-201ENST00000380071 APOBRQ0VD83 1088 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 IFFO2Q5TF58 517 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 TOM1L2Q6ZVM7 507 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 DHX32Q7L7V1 743 aaKnown RBP14.36□□□□□ -0.11
RFC3-201ENST00000380071 CADPS2Q86UW7 1296 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 LUZP1Q86V48 1076 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 SPC24Q8NBT2 197 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 PDCL3Q9H2J4 239 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 HELLSQ9NRZ9 838 aa14.36□□□□□ -0.11
RFC3-201ENST00000380071 EYA2O00167 538 aa14.35□□□□□ -0.11
RFC3-201ENST00000380071 CTDNEP1O95476 244 aa14.35□□□□□ -0.11
RFC3-201ENST00000380071 HSPD1P10809 573 aaKnown RBP14.35□□□□□ -0.11
RFC3-201ENST00000380071 DNTTIP2Q5QJE6 756 aaKnown RBP14.35□□□□□ -0.11
RFC3-201ENST00000380071 ZMYM1Q5SVZ6 1142 aa14.35□□□□□ -0.11
RFC3-201ENST00000380071 SASS6Q6UVJ0 657 aa14.35□□□□□ -0.11
RFC3-201ENST00000380071 CHST3Q7LGC8 479 aa14.35□□□□□ -0.11
RFC3-201ENST00000380071 VSIG10Q8N0Z9 540 aa14.35□□□□□ -0.11
RFC3-201ENST00000380071 PALLDQ8WX93 1383 aa14.35□□□□□ -0.11
RFC3-201ENST00000380071 A0A1B0GUL7 405 aa14.35□□□□□ -0.11
RFC3-201ENST00000380071 PFKFB2O60825 505 aa14.35□□□□□ -0.11
RFC3-201ENST00000380071 IFIT1P09914 478 aaKnown RBP14.35□□□□□ -0.11
RFC3-201ENST00000380071 CCT2P78371 535 aaKnown RBP14.35□□□□□ -0.11
RFC3-201ENST00000380071 CEBPZQ03701 1054 aaKnown RBP14.35□□□□□ -0.11
RFC3-201ENST00000380071 SMARCC2Q8TAQ2 1214 aa14.35□□□□□ -0.11
RFC3-201ENST00000380071 FAM200AQ8TCP9 573 aa14.35□□□□□ -0.11
RFC3-201ENST00000380071 FAM13BQ9NYF5 915 aa14.35□□□□□ -0.11
RFC3-201ENST00000380071 CPDO75976 1380 aa14.35□□□□□ -0.11
RFC3-201ENST00000380071 EXOSC10Q01780 885 aaKnown RBP14.34□□□□□ -0.11
RFC3-201ENST00000380071 ANO6Q4KMQ2 910 aa14.34□□□□□ -0.11
RFC3-201ENST00000380071 CCDC191Q8NCU4 936 aa14.34□□□□□ -0.11
RFC3-201ENST00000380071 NSUN7Q8NE18 718 aaKnown RBP14.34□□□□□ -0.11
RFC3-201ENST00000380071 BICD2Q8TD16 824 aa14.34□□□□□ -0.11
RFC3-201ENST00000380071 DSCC1Q9BVC3 393 aa14.34□□□□□ -0.11
RFC3-201ENST00000380071 KCNF1Q9H3M0 494 aa14.34□□□□□ -0.11
RFC3-201ENST00000380071 GPR108Q9NPR9 543 aa14.34□□□□□ -0.11
RFC3-201ENST00000380071 LAMA4Q16363 1823 aa14.34□□□□□ -0.11
RFC3-201ENST00000380071 LAMB4A4D0S4 1761 aa14.34□□□□□ -0.11
RFC3-201ENST00000380071 PCDH11XQ9BZA7 1347 aa14.34□□□□□ -0.11
RFC3-201ENST00000380071 PCDH11YQ9BZA8 1340 aa14.34□□□□□ -0.11
RFC3-201ENST00000380071 E7EWF7 191 aa14.34□□□□□ -0.11
RFC3-201ENST00000380071 TTLL5Q6EMB2 1281 aa14.34□□□□□ -0.11
RFC3-201ENST00000380071 CLSTN2Q9H4D0 955 aa14.34□□□□□ -0.11
RFC3-201ENST00000380071 MAST3O60307 1309 aa14.33□□□□□ -0.11
RFC3-201ENST00000380071 ERVV-2B6SEH9 535 aa14.33□□□□□ -0.12
RFC3-201ENST00000380071 HMGB1P09429 215 aaKnown RBP14.33□□□□□ -0.12
RFC3-201ENST00000380071 ADD1P35611 737 aaKnown RBP14.33□□□□□ -0.12
RFC3-201ENST00000380071 FTOQ9C0B1 505 aaKnown RBP eCLIP14.33□□□□□ -0.12
RFC3-201ENST00000380071 CBX8Q9HC52 389 aa14.33□□□□□ -0.12
RFC3-201ENST00000380071 NCOA5Q9HCD5 579 aaKnown RBP14.33□□□□□ -0.12
RFC3-201ENST00000380071 PRDM11Q9NQV5 511 aa14.33□□□□□ -0.12
RFC3-201ENST00000380071 DDX19AQ9NUU7 478 aaKnown RBP14.33□□□□□ -0.12
RFC3-201ENST00000380071 PLEKHG2Q9H7P9 1386 aa14.33□□□□□ -0.12
RFC3-201ENST00000380071 WDR17Q8IZU2 1322 aa14.33□□□□□ -0.12
RFC3-201ENST00000380071 M0R2C6 588 aa14.33□□□□□ -0.12
RFC3-201ENST00000380071 RNF113AO15541 343 aaKnown RBP14.33□□□□□ -0.12
RFC3-201ENST00000380071 RBM43Q6ZSC3 357 aaKnown RBP14.33□□□□□ -0.12
RFC3-201ENST00000380071 CCDC85AQ96PX6 553 aaPredicted RBP14.33□□□□□ -0.12
RFC3-201ENST00000380071 ZSCAN16Q9H4T2 348 aaPredicted RBP14.33□□□□□ -0.12
RFC3-201ENST00000380071 NAP1L2Q9ULW6 460 aaPredicted RBP14.33□□□□□ -0.12
RFC3-201ENST00000380071 DCCP43146 1447 aa14.32□□□□□ -0.12
RFC3-201ENST00000380071 PTPDC1A2A3K4 754 aa14.32□□□□□ -0.12
RFC3-201ENST00000380071 FKBP4Q02790 459 aaKnown RBP eCLIP14.32□□□□□ -0.12
RFC3-201ENST00000380071 OSBP2Q969R2 916 aa14.32□□□□□ -0.12
RFC3-201ENST00000380071 LLPHQ9BRT6 129 aaKnown RBP14.32□□□□□ -0.12
RFC3-201ENST00000380071 PYCARDQ9ULZ3 195 aa14.32□□□□□ -0.12
RFC3-201ENST00000380071 ZNF330Q9Y3S2 320 aaPredicted RBP14.32□□□□□ -0.12
RFC3-201ENST00000380071 AGXT2Q9BYV1 514 aa14.32□□□□□ -0.12
RFC3-201ENST00000380071 TJP1Q07157 1748 aa14.32□□□□□ -0.12
RFC3-201ENST00000380071 NUP188Q5SRE5 1749 aa14.31□□□□□ -0.12
RFC3-201ENST00000380071 ADORA1P30542 326 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms