RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 SEPT10Q9P0V9 454 aa12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 TACC3Q9Y6A5 838 aa12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 CCDC129Q6ZRS4 1044 aa12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 NUF2Q9BZD4 464 aa12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 FSIP1Q8NA03 581 aa12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 ZNF830Q96NB3 372 aaPredicted RBP12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 TRIM6Q9C030 488 aaPredicted RBP12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 FAM212AQ96EL1 285 aa12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 MYD88Q99836 296 aa12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 TAF7Q15545 349 aaPredicted RBP12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 CNNM2Q9H8M5 875 aa12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 SPDYE3A6NKU9 549 aa12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 PLCB3Q01970 1234 aa12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 STMN2Q93045 179 aa12.7□□□□□ -0.38
PTCHD1-201ENST00000379361 ZFYP08048 801 aaPredicted RBP12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 DUSP27Q5VZP5 1158 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 CCDC121Q6ZUS5 278 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 CCDC65Q8IXS2 484 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 N4BP3O15049 544 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 WDR44Q5JSH3 913 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 CCDC102BQ68D86 513 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 NSMCE1Q8WV22 266 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 INF2Q27J81 1249 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 VPS52Q8N1B4 723 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 MIPOL1Q8TD10 442 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 KIFAP3Q92845 792 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 HFM1A2PYH4 1435 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 PSMA7O14818 248 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 FCHSD2O94868 740 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 USH1CQ9Y6N9 552 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 PRPF40BQ6NWY9 871 aaKnown RBP12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 ZNF318Q5VUA4 2279 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 TNNI2P48788 182 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 NCOA7Q8NI08 942 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 M0QZ92 97 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 IVLP07476 585 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 SH2D4BQ5SQS7 431 aa12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 MTRF1LQ9UGC7 380 aaKnown RBP12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 NOP56O00567 594 aaKnown RBP12.69□□□□□ -0.38
PTCHD1-201ENST00000379361 MCM5P33992 734 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 GJC1P36383 396 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 HS2ST1Q7LGA3 356 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 HSPA1LP34931 641 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 VCXQ9H320 206 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 PPP2R1AP30153 589 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 METAP2P50579 478 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 MNAT1P51948 309 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 SEL1L2Q5TEA6 688 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 EXOC5O00471 708 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 PSPC1Q8WXF1 523 aaKnown RBP12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 NUTM1Q86Y26 1132 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 VEZTQ9HBM0 779 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 JDP2Q8WYK2 163 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 IL27Q8NEV9 243 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 BRPF3Q9ULD4 1205 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 ATP6V0A2Q9Y487 856 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 SLC26A6Q9BXS9 759 aa12.68□□□□□ -0.38
PTCHD1-201ENST00000379361 CASQ2O14958 399 aaPredicted RBP12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 TAOK1Q7L7X3 1001 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 TUBB4BP68371 445 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 PPP1R7Q15435 360 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 ASIC1P78348 528 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 CLUL1Q15846 466 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 SAMD15Q9P1V8 674 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 CITO14578 2027 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 SMTNP53814 917 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 RTN1Q16799 776 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 ZNF569Q5MCW4 686 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 TMOD4Q9NZQ9 345 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 MGEA5O60502 916 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 PPFIA2O75334 1257 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 HACE1Q8IYU2 909 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 IL1RAPL2Q9NP60 686 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 CCDC171Q6TFL3 1326 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 SETDB1Q15047 1291 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 LIMCH1Q9UPQ0 1083 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 AGTPBP1Q9UPW5 1226 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 C9orf84Q5VXU9 1444 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 TMTC2Q8N394 836 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 MPNDQ8N594 471 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 EVI5LQ96CN4 794 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 DIDO1Q9BTC0 2240 aaKnown RBP12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 CTAGE9A4FU28 777 aa12.67□□□□□ -0.38
PTCHD1-201ENST00000379361 STX8Q9UNK0 236 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 ERICH3Q5RHP9 1530 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 RRP36Q96EU6 259 aaKnown RBP12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 RPL13P26373 211 aaKnown RBP12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 WTAPQ15007 396 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 RNF34Q969K3 372 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 EPB41P11171 864 aaKnown RBP12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 TNPO1Q92973 898 aaKnown RBP12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 IFT74Q96LB3 600 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 CCDC94Q9BW85 323 aaPredicted RBP12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 PPANQ9NQ55 473 aaKnown RBP12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 GOLGA6CA6NDK9 693 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 GOLGA6BA6NDN3 693 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms