RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 GOLGA6AQ9NYA3 693 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 ARHGAP6O43182 974 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 SARM1Q6SZW1 724 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 CTCFLQ8NI51 663 aaPredicted RBP12.56□□□□□ -0.4
USP6NL-202ENST00000379237 PPP2R2CQ9Y2T4 447 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 EIF2AK4Q9P2K8 1649 aaKnown RBP12.56□□□□□ -0.4
USP6NL-202ENST00000379237 PLEKHG2Q9H7P9 1386 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 PLXNC1O60486 1568 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 RNF40O75150 1001 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 FBLN1P23142 703 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 SASH3O75995 380 aa12.55□□□□□ -0.4
USP6NL-202ENST00000379237 PTPN21Q16825 1174 aa12.55□□□□□ -0.4
USP6NL-202ENST00000379237 ATRIPQ8WXE1 791 aa12.55□□□□□ -0.4
USP6NL-202ENST00000379237 MSH6P52701 1360 aa12.55□□□□□ -0.4
USP6NL-202ENST00000379237 FAM160A1Q05DH4 1040 aa12.55□□□□□ -0.4
USP6NL-202ENST00000379237 CEP85LQ5SZL2 805 aa12.55□□□□□ -0.4
USP6NL-202ENST00000379237 DHX58Q96C10 678 aa12.55□□□□□ -0.4
USP6NL-202ENST00000379237 DESI2Q9BSY9 194 aa12.55□□□□□ -0.4
USP6NL-202ENST00000379237 CFAP74Q9C0B2 1584 aa12.55□□□□□ -0.4
USP6NL-202ENST00000379237 SAMM50Q9Y512 469 aa12.55□□□□□ -0.4
USP6NL-202ENST00000379237 RPAP1Q9BWH6 1393 aaPredicted RBP12.55□□□□□ -0.4
USP6NL-202ENST00000379237 UNC5CLQ8IV45 518 aa12.55□□□□□ -0.4
USP6NL-202ENST00000379237 MYO6Q9UM54 1294 aa12.55□□□□□ -0.4
USP6NL-202ENST00000379237 FAM169AQ9Y6X4 670 aa12.55□□□□□ -0.4
USP6NL-202ENST00000379237 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
USP6NL-202ENST00000379237 ABCB6Q9NP58 842 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 MED4Q9NPJ6 270 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 RTL1A6NKG5 1358 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 SGSM2O43147 1006 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 STK11IPQ8N1F8 1099 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 PHACTR3Q96KR7 559 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 RBM8AQ9Y5S9 174 aaKnown RBP12.54□□□□□ -0.4
USP6NL-202ENST00000379237 E9PCH4 1651 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 ZRANB2O95218 330 aaKnown RBP eCLIP12.54□□□□□ -0.41e-6■■■■■ 42
USP6NL-202ENST00000379237 PIP4K2BP78356 416 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 FILIP1LQ4L180 1135 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 TTC19Q6DKK2 380 aaPredicted RBP12.54□□□□□ -0.4
USP6NL-202ENST00000379237 B4GALNT4Q76KP1 1039 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 H3BQF6 201 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 CASP8Q14790 479 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 KIAA1328Q86T90 577 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 GNL3LQ9NVN8 582 aaKnown RBP12.54□□□□□ -0.4
USP6NL-202ENST00000379237 HYPKQ9NX55 129 aa12.54□□□□□ -0.4
USP6NL-202ENST00000379237 SCP2P22307 547 aa12.53□□□□□ -0.4
USP6NL-202ENST00000379237 CCT2P78371 535 aaKnown RBP12.53□□□□□ -0.4
USP6NL-202ENST00000379237 MCM10Q7L590 875 aa12.53□□□□□ -0.4
USP6NL-202ENST00000379237 RSRC1Q96IZ7 334 aaKnown RBP12.53□□□□□ -0.4
USP6NL-202ENST00000379237 TRIM6Q9C030 488 aaPredicted RBP12.53□□□□□ -0.4
USP6NL-202ENST00000379237 POLR3DP05423 398 aaPredicted RBP12.53□□□□□ -0.4
USP6NL-202ENST00000379237 EIF2S2P20042 333 aaKnown RBP12.53□□□□□ -0.4
USP6NL-202ENST00000379237 HNRNPH1P31943 449 aaKnown RBP12.53□□□□□ -0.4
USP6NL-202ENST00000379237 STIM1Q13586 685 aa12.53□□□□□ -0.4
USP6NL-202ENST00000379237 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
USP6NL-202ENST00000379237 N4BP1O75113 896 aaKnown RBP12.53□□□□□ -0.4
USP6NL-202ENST00000379237 GNGT1P63211 74 aa12.53□□□□□ -0.4
USP6NL-202ENST00000379237 NOS1P29475 1434 aa12.52□□□□□ -0.4
USP6NL-202ENST00000379237 RPSAP08865 295 aaKnown RBP12.52□□□□□ -0.4
USP6NL-202ENST00000379237 FUT8Q9BYC5 575 aa12.52□□□□□ -0.4
USP6NL-202ENST00000379237 SPATS2LQ9NUQ6 558 aaKnown RBP12.52□□□□□ -0.4
USP6NL-202ENST00000379237 TUBBP07437 444 aa12.52□□□□□ -0.4
USP6NL-202ENST00000379237 SRGAP1Q7Z6B7 1085 aa12.52□□□□□ -0.4
USP6NL-202ENST00000379237 PRDM15P57071 1507 aaPredicted RBP12.52□□□□□ -0.41
USP6NL-202ENST00000379237 HDGFP51858 240 aaKnown RBP12.52□□□□□ -0.41
USP6NL-202ENST00000379237 MAP2K1Q02750 393 aaPredicted RBP12.52□□□□□ -0.41
USP6NL-202ENST00000379237 MTX1Q13505 466 aa12.52□□□□□ -0.41
USP6NL-202ENST00000379237 CALR3Q96L12 384 aaKnown RBP12.52□□□□□ -0.41
USP6NL-202ENST00000379237 LRRC2Q9BYS8 371 aa12.52□□□□□ -0.41
USP6NL-202ENST00000379237 HIP1O00291 1037 aa12.52□□□□□ -0.41
USP6NL-202ENST00000379237 SUGP1Q8IWZ8 645 aaKnown RBP12.52□□□□□ -0.41
USP6NL-202ENST00000379237 C9orf78Q9NZ63 289 aaPredicted RBP12.52□□□□□ -0.41
USP6NL-202ENST00000379237 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.41
USP6NL-202ENST00000379237 PPP1R12AO14974 1030 aaPredicted RBP12.51□□□□□ -0.41
USP6NL-202ENST00000379237 TUBB4BP68371 445 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 E2F5Q15329 346 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 TPCN1Q9ULQ1 816 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 GOLGA6L10A6NI86 522 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 JAK2O60674 1132 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 ADKP55263 362 aaKnown RBP12.51□□□□□ -0.41
USP6NL-202ENST00000379237 ODF2Q5BJF6 829 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 ARMCX5Q6P1M9 558 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 CCDC121Q6ZUS5 278 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 TOPBP1Q92547 1522 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 ELF1P32519 619 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 ARHGAP25P42331 645 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 TRDNQ13061 729 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 CAPZA3Q96KX2 299 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 SAMD9Q5K651 1589 aa12.51□□□□□ -0.41
USP6NL-202ENST00000379237 PDE6BP35913 854 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 IQCB1Q15051 598 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 ADCK5Q3MIX3 580 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 CARD10Q9BWT7 1032 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 CAPS2Q9BXY5 557 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 FAM135BQ49AJ0 1406 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 ADGRL2O95490 1459 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 SYNMO15061 1565 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 CREB3L3Q68CJ9 461 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 KLHL10Q6JEL2 608 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 LRRC31Q6UY01 552 aa12.5□□□□□ -0.41
USP6NL-202ENST00000379237 SSH2Q76I76 1423 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms