RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 SSX2IPQ9Y2D8 614 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 BIN1O00499 593 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 ACTN2P35609 894 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 GJB2P29033 226 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 EAPPQ56P03 285 aaPredicted RBP12.53□□□□□ -0.4
LINC00654-201ENST00000379053 SUPT20HQ8NEM7 779 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 TFIP11Q9UBB9 837 aaKnown RBP12.52□□□□□ -0.4
LINC00654-201ENST00000379053 PLCH2O75038 1416 aa12.52□□□□□ -0.4
LINC00654-201ENST00000379053 KRT13P13646 458 aa12.52□□□□□ -0.41
LINC00654-201ENST00000379053 HOMER2Q9NSB8 354 aa12.52□□□□□ -0.41
LINC00654-201ENST00000379053 ZNF608Q9ULD9 1512 aaPredicted RBP12.52□□□□□ -0.41
LINC00654-201ENST00000379053 PAFAH1B1P43034 410 aa12.52□□□□□ -0.41
LINC00654-201ENST00000379053 PRPF4BQ13523 1007 aaKnown RBP12.52□□□□□ -0.41
LINC00654-201ENST00000379053 KIF4BQ2VIQ3 1234 aa12.52□□□□□ -0.41
LINC00654-201ENST00000379053 BRF1Q92994 677 aa12.52□□□□□ -0.41
LINC00654-201ENST00000379053 PICK1Q9NRD5 415 aa12.52□□□□□ -0.41
LINC00654-201ENST00000379053 GRIPAP1Q4V328 841 aa12.52□□□□□ -0.41
LINC00654-201ENST00000379053 GRPEL1Q9HAV7 217 aa12.52□□□□□ -0.41
LINC00654-201ENST00000379053 RRP9O43818 475 aaKnown RBP12.51□□□□□ -0.41
LINC00654-201ENST00000379053 IMPG2Q9BZV3 1241 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 KCNA6P17658 529 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 SP4Q02446 784 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 CCDC183Q5T5S1 534 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 KANK3Q6NY19 840 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 LMAN1P49257 510 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 IFFO1Q0D2I5 559 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 EIF4A2Q14240 407 aaKnown RBP12.51□□□□□ -0.41
LINC00654-201ENST00000379053 BRDTQ58F21 947 aaPredicted RBP12.51□□□□□ -0.41
LINC00654-201ENST00000379053 MIGA1Q8NAN2 632 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 CRACR2AQ9BSW2 395 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 TRIM47Q96LD4 638 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 UFL1O94874 794 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 MCM4P33991 863 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 UBXN4Q92575 508 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 SH2D4AQ9H788 454 aa12.51□□□□□ -0.41
LINC00654-201ENST00000379053 BACH1O14867 736 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
LINC00654-201ENST00000379053 CCDC102BQ68D86 513 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 RRP36Q96EU6 259 aaKnown RBP12.5□□□□□ -0.41
LINC00654-201ENST00000379053 RBM25P49756 843 aaKnown RBP12.5□□□□□ -0.41
LINC00654-201ENST00000379053 C20orf194Q5TEA3 1177 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 ARHGAP27Q6ZUM4 889 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 PTPN23Q9H3S7 1636 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 CCDC172P0C7W6 258 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 LARGE2Q8N3Y3 721 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 TMOD4Q9NZQ9 345 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 IL16Q14005 1332 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 PCF11O94913 1555 aaKnown RBP12.5□□□□□ -0.41
LINC00654-201ENST00000379053 LRRC45Q96CN5 670 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 ALS2CR12Q96Q35 445 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 TAOK3Q9H2K8 898 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 ALG1Q9BT22 464 aa12.5□□□□□ -0.41
LINC00654-201ENST00000379053 A2MP01023 1474 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 FLT4P35916 1363 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 ZBTB24O43167 697 aaPredicted RBP12.49□□□□□ -0.41
LINC00654-201ENST00000379053 STAMBPO95630 424 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 BMP15O95972 392 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 GNAT2P19087 354 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 STAT6P42226 847 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 TTC6Q86TZ1 520 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 DHX37Q8IY37 1157 aaKnown RBP12.49□□□□□ -0.41
LINC00654-201ENST00000379053 TBC1D5Q92609 795 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 LRRC2Q9BYS8 371 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 ZBTB21Q9ULJ3 1066 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 H0YIN7 160 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 MTHFSDQ2M296 383 aaKnown RBP12.49□□□□□ -0.41
LINC00654-201ENST00000379053 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 DPH6Q7L8W6 267 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 MEIS3Q99687 375 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 MAGEB6Q8N7X4 407 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 RMND1Q9NWS8 449 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 IVNS1ABPQ9Y6Y0 642 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 CUL7Q14999 1698 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 MRPS9P82933 396 aaKnown RBP12.49□□□□□ -0.41
LINC00654-201ENST00000379053 RAB3GAP1Q15042 981 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 LINS1Q8NG48 757 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 SPAG5Q96R06 1193 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 DDX19AQ9NUU7 478 aaKnown RBP12.49□□□□□ -0.41
LINC00654-201ENST00000379053 SBNO2Q9Y2G9 1366 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 SSFA2P28290 1259 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 MAP2K1Q02750 393 aaPredicted RBP12.49□□□□□ -0.41
LINC00654-201ENST00000379053 GBP3Q9H0R5 595 aa12.49□□□□□ -0.41
LINC00654-201ENST00000379053 PAG1Q9NWQ8 432 aa12.48□□□□□ -0.41
LINC00654-201ENST00000379053 TSNARE1Q96NA8 513 aa12.48□□□□□ -0.41
LINC00654-201ENST00000379053 ISM2Q6H9L7 571 aa12.48□□□□□ -0.41
LINC00654-201ENST00000379053 CASQ1P31415 396 aa12.48□□□□□ -0.41
LINC00654-201ENST00000379053 GPHNQ9NQX3 736 aaPredicted RBP12.48□□□□□ -0.41
LINC00654-201ENST00000379053 KIF4AO95239 1232 aa12.47□□□□□ -0.41
LINC00654-201ENST00000379053 BMS1Q14692 1282 aaKnown RBP12.47□□□□□ -0.41
LINC00654-201ENST00000379053 PA2G4Q9UQ80 394 aaKnown RBP12.47□□□□□ -0.41
LINC00654-201ENST00000379053 BCS1LQ9Y276 419 aa12.47□□□□□ -0.41
LINC00654-201ENST00000379053 PRKG1Q13976 671 aa12.47□□□□□ -0.41
LINC00654-201ENST00000379053 RRAGBQ5VZM2 374 aa12.47□□□□□ -0.41
LINC00654-201ENST00000379053 CLIP2Q9UDT6 1046 aa12.47□□□□□ -0.41
LINC00654-201ENST00000379053 GCOM1H8Y6P7 765 aaPredicted RBP12.47□□□□□ -0.41
LINC00654-201ENST00000379053 MYZAPP0CAP1 466 aa12.47□□□□□ -0.41
LINC00654-201ENST00000379053 AFMP43652 599 aa12.47□□□□□ -0.41
LINC00654-201ENST00000379053 TEX11Q8IYF3 940 aa12.47□□□□□ -0.41
LINC00654-201ENST00000379053 MRVI1Q9Y6F6 885 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms