RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 GYG1P46976 350 aa9.63□□□□□ -0.87
CKAP2-203ENST00000378037 QSER1Q2KHR3 1735 aa9.63□□□□□ -0.87
CKAP2-203ENST00000378037 A0A0G2JLW4 131 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 PLBD2Q8NHP8 589 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 ZBTB9Q96C00 473 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 PAG1Q9NWQ8 432 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 PLEKHG2Q9H7P9 1386 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 JAK2O60674 1132 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 BAG4O95429 457 aaKnown RBP9.62□□□□□ -0.87
CKAP2-203ENST00000378037 TMX4Q9H1E5 349 aaPredicted RBP9.62□□□□□ -0.87
CKAP2-203ENST00000378037 C1orf167Q5SNV9 1468 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 LOC102724428A0A0B4J2F2 783 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 BCAMP50895 628 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 SIK1P57059 783 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 NUCB2P80303 420 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 SSH3Q8TE77 659 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 EVI5LQ96CN4 794 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 XAGE2Q96GT9 111 aa9.62□□□□□ -0.87
CKAP2-203ENST00000378037 THSD7AQ9UPZ6 1657 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 OVOS2A0A0J9YW53 1432 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 OVOS2Q6IE36 1432 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 ALDH1L1O75891 902 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 DNM1Q05193 864 aaKnown RBP9.61□□□□□ -0.87
CKAP2-203ENST00000378037 USPL1Q5W0Q7 1092 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 ZSCAN29Q8IWY8 852 aaPredicted RBP9.61□□□□□ -0.87
CKAP2-203ENST00000378037 MAGEB6Q8N7X4 407 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 GJB4Q9NTQ9 266 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 PIK3C2AO00443 1686 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 COL14A1Q05707 1796 aaKnown RBP9.61□□□□□ -0.87
CKAP2-203ENST00000378037 CRKLP46109 303 aaKnown RBP9.61□□□□□ -0.87
CKAP2-203ENST00000378037 SETDB2Q96T68 719 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 VAT1LQ9HCJ6 419 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 ZNF831Q5JPB2 1677 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 BIN1O00499 593 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 ME1P48163 572 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 CREB3L3Q68CJ9 461 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 Q6ZUG5 572 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 NAPBQ9H115 298 aa9.61□□□□□ -0.87
CKAP2-203ENST00000378037 KIF20BQ96Q89 1820 aa9.6□□□□□ -0.87
CKAP2-203ENST00000378037 LARGE1O95461 756 aa9.6□□□□□ -0.87
CKAP2-203ENST00000378037 COL9A3Q14050 684 aaPredicted RBP9.6□□□□□ -0.87
CKAP2-203ENST00000378037 ATG3Q9NT62 314 aa9.6□□□□□ -0.87
CKAP2-203ENST00000378037 MSNP26038 577 aaKnown RBP9.6□□□□□ -0.87
CKAP2-203ENST00000378037 PHKA1P46020 1223 aa9.6□□□□□ -0.87
CKAP2-203ENST00000378037 NASPP49321 788 aaPredicted RBP9.6□□□□□ -0.87
CKAP2-203ENST00000378037 PDE4CQ08493 712 aa9.6□□□□□ -0.87
CKAP2-203ENST00000378037 GIMAP6Q6P9H5 292 aa9.6□□□□□ -0.87
CKAP2-203ENST00000378037 ARMT1Q9H993 441 aa9.6□□□□□ -0.87
CKAP2-203ENST00000378037 SNX14Q9Y5W7 946 aa9.6□□□□□ -0.87
CKAP2-203ENST00000378037 ADCY9O60503 1353 aa9.6□□□□□ -0.87
CKAP2-203ENST00000378037 GOLGA8BA8MQT2 603 aa9.6□□□□□ -0.87
CKAP2-203ENST00000378037 AKAP17AQ02040 695 aaKnown RBP9.6□□□□□ -0.87
CKAP2-203ENST00000378037 PICALMQ13492 652 aa9.6□□□□□ -0.87
CKAP2-203ENST00000378037 ZNF830Q96NB3 372 aaPredicted RBP9.6□□□□□ -0.87
CKAP2-203ENST00000378037 CRB1P82279 1406 aa9.59□□□□□ -0.87
CKAP2-203ENST00000378037 BAZ2BQ9UIF8 2168 aaKnown RBP9.59□□□□□ -0.87
CKAP2-203ENST00000378037 EYA2O00167 538 aa9.59□□□□□ -0.87
CKAP2-203ENST00000378037 EIF6P56537 245 aaKnown RBP9.59□□□□□ -0.87
CKAP2-203ENST00000378037 IKQ13123 557 aaPredicted RBP9.59□□□□□ -0.87
CKAP2-203ENST00000378037 L1TD1Q5T7N2 865 aaKnown RBP9.59□□□□□ -0.87
CKAP2-203ENST00000378037 SYNE3Q6ZMZ3 975 aa9.59□□□□□ -0.87
CKAP2-203ENST00000378037 PDILTQ8N807 584 aa9.59□□□□□ -0.87
CKAP2-203ENST00000378037 SDR42E1Q8WUS8 393 aa9.59□□□□□ -0.87
CKAP2-203ENST00000378037 SDF4Q9BRK5 362 aa9.59□□□□□ -0.87
CKAP2-203ENST00000378037 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
CKAP2-203ENST00000378037 CLSTN1O94985 981 aa9.59□□□□□ -0.87
CKAP2-203ENST00000378037 PSMA5P28066 241 aa9.59□□□□□ -0.87
CKAP2-203ENST00000378037 PTPN12Q05209 780 aaKnown RBP9.59□□□□□ -0.87
CKAP2-203ENST00000378037 SCARF1Q14162 830 aa9.59□□□□□ -0.87
CKAP2-203ENST00000378037 PKNOX2Q96KN3 472 aa9.59□□□□□ -0.87
CKAP2-203ENST00000378037 PARP4Q9UKK3 1724 aaKnown RBP9.59□□□□□ -0.88
CKAP2-203ENST00000378037 GADD45BO75293 160 aaPredicted RBP9.58□□□□□ -0.88
CKAP2-203ENST00000378037 CTDSPL2Q05D32 466 aa9.58□□□□□ -0.88
CKAP2-203ENST00000378037 NEK1Q96PY6 1258 aa9.58□□□□□ -0.88
CKAP2-203ENST00000378037 SCAF8Q9UPN6 1271 aaKnown RBP9.58□□□□□ -0.88
CKAP2-203ENST00000378037 LIMCH1Q9UPQ0 1083 aa9.58□□□□□ -0.88
CKAP2-203ENST00000378037 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.58□□□□□ -0.88
CKAP2-203ENST00000378037 B4E1Z4 1266 aa9.58□□□□□ -0.88
CKAP2-203ENST00000378037 ZNF213O14771 459 aa9.58□□□□□ -0.88
CKAP2-203ENST00000378037 SGSM2O43147 1006 aa9.58□□□□□ -0.88
CKAP2-203ENST00000378037 CYP7A1P22680 504 aa9.58□□□□□ -0.88
CKAP2-203ENST00000378037 TCIRG1Q13488 830 aa9.58□□□□□ -0.88
CKAP2-203ENST00000378037 DHX8Q14562 1220 aaKnown RBP9.58□□□□□ -0.88
CKAP2-203ENST00000378037 UTP14AQ9BVJ6 771 aaKnown RBP9.58□□□□□ -0.88
CKAP2-203ENST00000378037 CARD10Q9BWT7 1032 aa9.58□□□□□ -0.88
CKAP2-203ENST00000378037 FTOQ9C0B1 505 aaKnown RBP eCLIP9.58□□□□□ -0.88
CKAP2-203ENST00000378037 CYP2D7A0A087X1C5 515 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 KLF18A0A0U1RQI7 1052 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 ERICH2A1L162 156 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 FAM196AQ6ZSG2 479 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 SLC51AQ86UW1 340 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 SAP30BPQ9UHR5 308 aaKnown RBP9.57□□□□□ -0.88
CKAP2-203ENST00000378037 STX8Q9UNK0 236 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 RTCBQ9Y3I0 505 aaKnown RBP9.57□□□□□ -0.88
CKAP2-203ENST00000378037 MBD4O95243 580 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 HOMER1Q86YM7 354 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 ZNF592Q92610 1267 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 CCDC171Q6TFL3 1326 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 SH3TC1Q8TE82 1336 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 IFIT3O14879 490 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms