RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 FGD1P98174 961 aa21.18■□□□□ 0.98
GNE-201ENST00000377902 XAGE3Q8WTP9 111 aa21.18■□□□□ 0.98
GNE-201ENST00000377902 ADGRL3Q9HAR2 1447 aa21.18■□□□□ 0.98
GNE-201ENST00000377902 GOLGA6L19H0YKK7 550 aa21.18■□□□□ 0.98
GNE-201ENST00000377902 GCKRQ14397 625 aa21.18■□□□□ 0.98
GNE-201ENST00000377902 LMOD2Q6P5Q4 547 aa21.18■□□□□ 0.98
GNE-201ENST00000377902 COPS6Q7L5N1 327 aa21.18■□□□□ 0.98
GNE-201ENST00000377902 FILIP1Q7Z7B0 1213 aa21.18■□□□□ 0.98
GNE-201ENST00000377902 DBNDD2Q9BQY9 259 aa21.18■□□□□ 0.98
GNE-201ENST00000377902 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.18■□□□□ 0.98
GNE-201ENST00000377902 V9GYY5 206 aaPredicted RBP21.18■□□□□ 0.98
GNE-201ENST00000377902 NFAT5O94916 1531 aa21.17■□□□□ 0.98
GNE-201ENST00000377902 CTDNEP1O95476 244 aa21.17■□□□□ 0.98
GNE-201ENST00000377902 CCDC112Q8NEF3 446 aa21.17■□□□□ 0.98
GNE-201ENST00000377902 NCOA5Q9HCD5 579 aaKnown RBP21.17■□□□□ 0.98
GNE-201ENST00000377902 TRMT1Q9NXH9 659 aaKnown RBP21.17■□□□□ 0.98
GNE-201ENST00000377902 APOBRQ0VD83 1088 aa21.17■□□□□ 0.98
GNE-201ENST00000377902 AMOTQ4VCS5 1084 aa21.17■□□□□ 0.98
GNE-201ENST00000377902 TNNI3KQ59H18 835 aa21.17■□□□□ 0.98
GNE-201ENST00000377902 NAP1L2Q9ULW6 460 aaPredicted RBP21.17■□□□□ 0.98
GNE-201ENST00000377902 AXIN2Q9Y2T1 843 aa21.17■□□□□ 0.98
GNE-201ENST00000377902 FPGT-TNNI3KV9GXZ4 949 aa21.17■□□□□ 0.98
GNE-201ENST00000377902 LMO7Q8WWI1 1683 aa21.17■□□□□ 0.98
GNE-201ENST00000377902 CHST3Q7LGC8 479 aa21.16■□□□□ 0.98
GNE-201ENST00000377902 USP28Q96RU2 1077 aa21.16■□□□□ 0.98
GNE-201ENST00000377902 SNW1Q13573 536 aaKnown RBP21.16■□□□□ 0.98
GNE-201ENST00000377902 CEP135Q66GS9 1140 aa21.16■□□□□ 0.98
GNE-201ENST00000377902 CFAP45Q9UL16 551 aa21.16■□□□□ 0.98
GNE-201ENST00000377902 ATP5JP18859 108 aa21.15■□□□□ 0.98
GNE-201ENST00000377902 PTPN12Q05209 780 aaKnown RBP21.15■□□□□ 0.98
GNE-201ENST00000377902 KRT32Q14532 448 aa21.15■□□□□ 0.98
GNE-201ENST00000377902 ANKRD24Q8TF21 1146 aa21.15■□□□□ 0.98
GNE-201ENST00000377902 CTNNA3Q9UI47 895 aa21.15■□□□□ 0.98
GNE-201ENST00000377902 ARHGAP23Q9P227 1491 aa21.15■□□□□ 0.98
GNE-201ENST00000377902 SLIT1O75093 1534 aa21.15■□□□□ 0.98
GNE-201ENST00000377902 THEMISQ8N1K5 641 aaPredicted RBP21.15■□□□□ 0.98
GNE-201ENST00000377902 NSUN7Q8NE18 718 aaKnown RBP21.15■□□□□ 0.98
GNE-201ENST00000377902 SKILP12757 684 aa21.14■□□□□ 0.98
GNE-201ENST00000377902 DHX40Q8IX18 779 aaKnown RBP21.14■□□□□ 0.98
GNE-201ENST00000377902 GTPBP4Q9BZE4 634 aaKnown RBP21.14■□□□□ 0.98
GNE-201ENST00000377902 ZSCAN16Q9H4T2 348 aaPredicted RBP21.14■□□□□ 0.98
GNE-201ENST00000377902 GCP02774 474 aa21.14■□□□□ 0.97
GNE-201ENST00000377902 NEXNQ0ZGT2 675 aa21.14■□□□□ 0.97
GNE-201ENST00000377902 PTPDC1A2A3K4 754 aa21.13■□□□□ 0.97
GNE-201ENST00000377902 ATP5J2-PTCD1G3V325 749 aa21.13■□□□□ 0.97
GNE-201ENST00000377902 PTCD1O75127 700 aaKnown RBP21.13■□□□□ 0.97
GNE-201ENST00000377902 RFX5P48382 616 aaPredicted RBP21.13■□□□□ 0.97
GNE-201ENST00000377902 MCMDC2Q4G0Z9 681 aa21.13■□□□□ 0.97
GNE-201ENST00000377902 UBE3BQ7Z3V4 1068 aa21.13■□□□□ 0.97
GNE-201ENST00000377902 PAXBP1Q9Y5B6 917 aa21.13■□□□□ 0.97
GNE-201ENST00000377902 BECN2A8MW95 431 aa21.13■□□□□ 0.97
GNE-201ENST00000377902 SMARCC2Q8TAQ2 1214 aa21.13■□□□□ 0.97
GNE-201ENST00000377902 KCNH5Q8NCM2 988 aa21.12■□□□□ 0.97
GNE-201ENST00000377902 SYTL4Q96C24 671 aaPredicted RBP21.12■□□□□ 0.97
GNE-201ENST00000377902 RCOR1Q9UKL0 485 aa21.12■□□□□ 0.97
GNE-201ENST00000377902 U3KPZ7 1027 aaPredicted RBP21.12■□□□□ 0.97
GNE-201ENST00000377902 USP54Q70EL1 1684 aa21.12■□□□□ 0.97
GNE-201ENST00000377902 CCDC69A6NI79 296 aa21.12■□□□□ 0.97
GNE-201ENST00000377902 STX1AQ16623 288 aa21.12■□□□□ 0.97
GNE-201ENST00000377902 ZNF790Q6PG37 636 aa21.12■□□□□ 0.97
GNE-201ENST00000377902 CDC25BP30305 580 aa21.11■□□□□ 0.97
GNE-201ENST00000377902 ILDR1Q86SU0 546 aaPredicted RBP21.11■□□□□ 0.97
GNE-201ENST00000377902 NFATC2IPQ8NCF5 419 aa21.11■□□□□ 0.97
GNE-201ENST00000377902 ZNF215Q9UL58 517 aaPredicted RBP21.11■□□□□ 0.97
GNE-201ENST00000377902 PFKFB2O60825 505 aa21.11■□□□□ 0.97
GNE-201ENST00000377902 ME1P48163 572 aa21.11■□□□□ 0.97
GNE-201ENST00000377902 SARM1Q6SZW1 724 aa21.11■□□□□ 0.97
GNE-201ENST00000377902 AOPEPQ8N6M6 819 aa21.11■□□□□ 0.97
GNE-201ENST00000377902 METTL22Q9BUU2 404 aaPredicted RBP21.11■□□□□ 0.97
GNE-201ENST00000377902 COPRSQ9NQ92 184 aa21.11■□□□□ 0.97
GNE-201ENST00000377902 CCZ1BP86790 482 aa21.1■□□□□ 0.97
GNE-201ENST00000377902 CCZ1P86791 482 aaPredicted RBP21.1■□□□□ 0.97
GNE-201ENST00000377902 ARHGEF25Q86VW2 580 aa21.1■□□□□ 0.97
GNE-201ENST00000377902 MRFAP1L1Q96HT8 127 aa21.1■□□□□ 0.97
GNE-201ENST00000377902 OTUD7BQ6GQQ9 843 aa21.1■□□□□ 0.97
GNE-201ENST00000377902 FSIP1Q8NA03 581 aa21.1■□□□□ 0.97
GNE-201ENST00000377902 ENGASEQ8NFI3 743 aa21.1■□□□□ 0.97
GNE-201ENST00000377902 FEZ1Q99689 392 aa21.1■□□□□ 0.97
GNE-201ENST00000377902 OGFRQ9NZT2 677 aa21.1■□□□□ 0.97
GNE-201ENST00000377902 PTPN14Q15678 1187 aa21.09■□□□□ 0.97
GNE-201ENST00000377902 CCDC73Q6ZRK6 1079 aa21.09■□□□□ 0.97
GNE-201ENST00000377902 GOLIM4O00461 696 aa21.09■□□□□ 0.97
GNE-201ENST00000377902 KINO60870 393 aaKnown RBP21.09■□□□□ 0.97
GNE-201ENST00000377902 RBM6P78332 1123 aaKnown RBP21.09■□□□□ 0.97
GNE-201ENST00000377902 ANKRD13DQ6ZTN6 518 aa21.09■□□□□ 0.97
GNE-201ENST00000377902 DHX32Q7L7V1 743 aaKnown RBP21.09■□□□□ 0.97
GNE-201ENST00000377902 ORAI2Q96SN7 254 aa21.09■□□□□ 0.97
GNE-201ENST00000377902 HAUS7Q99871 368 aa21.09■□□□□ 0.97
GNE-201ENST00000377902 GPHNQ9NQX3 736 aaPredicted RBP21.09■□□□□ 0.97
GNE-201ENST00000377902 NPHP1O15259 732 aa21.08■□□□□ 0.97
GNE-201ENST00000377902 NYAP1Q6ZVC0 841 aa21.08■□□□□ 0.97
GNE-201ENST00000377902 ZNF496Q96IT1 587 aaPredicted RBP21.08■□□□□ 0.97
GNE-201ENST00000377902 A0A1B0GVL5 298 aa21.08■□□□□ 0.96
GNE-201ENST00000377902 NEUROD6Q96NK8 337 aa21.08■□□□□ 0.96
GNE-201ENST00000377902 TIMM10P62072 90 aa21.07■□□□□ 0.96
GNE-201ENST00000377902 CAVIN2O95810 425 aa21.07■□□□□ 0.96
GNE-201ENST00000377902 SYCP1Q15431 976 aa21.07■□□□□ 0.96
GNE-201ENST00000377902 KMT5BQ4FZB7 885 aa21.07■□□□□ 0.96
GNE-201ENST00000377902 NAA16Q6N069 864 aaPredicted RBP21.07■□□□□ 0.96
GNE-201ENST00000377902 DDX41Q9UJV9 622 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms