RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 ECE2O60344 883 aa24.78■■□□□ 1.56
CBWD3-204ENST00000377349 DLK2Q6UY11 383 aa24.78■■□□□ 1.56
CBWD3-204ENST00000377349 CDC37L1Q7L3B6 337 aa24.78■■□□□ 1.56
CBWD3-204ENST00000377349 SAMD7Q7Z3H4 446 aa24.78■■□□□ 1.56
CBWD3-204ENST00000377349 MYD88Q99836 296 aa24.78■■□□□ 1.56
CBWD3-204ENST00000377349 H7C1D1 291 aa24.77■■□□□ 1.56
CBWD3-204ENST00000377349 MAP2K2P36507 400 aa24.77■■□□□ 1.56
CBWD3-204ENST00000377349 PODXL2Q9NZ53 605 aa24.77■■□□□ 1.56
CBWD3-204ENST00000377349 DOK7Q18PE1 504 aa24.76■■□□□ 1.55
CBWD3-204ENST00000377349 ANP32CO43423 234 aa24.75■■□□□ 1.55
CBWD3-204ENST00000377349 PCCAP05165 728 aaPredicted RBP24.75■■□□□ 1.55
CBWD3-204ENST00000377349 CCDC191Q8NCU4 936 aa24.75■■□□□ 1.55
CBWD3-204ENST00000377349 ZNF408Q9H9D4 720 aa24.75■■□□□ 1.55
CBWD3-204ENST00000377349 CACNA1FO60840 1977 aa24.75■■□□□ 1.55
CBWD3-204ENST00000377349 RPS12P25398 132 aaKnown RBP24.74■■□□□ 1.55
CBWD3-204ENST00000377349 CALD1Q05682 793 aaKnown RBP24.74■■□□□ 1.55
CBWD3-204ENST00000377349 USP48Q86UV5 1035 aa24.74■■□□□ 1.55
CBWD3-204ENST00000377349 EYA3Q99504 573 aa24.74■■□□□ 1.55
CBWD3-204ENST00000377349 TBC1D10BQ4KMP7 808 aaPredicted RBP24.73■■□□□ 1.55
CBWD3-204ENST00000377349 TSPYL6Q8N831 410 aa24.73■■□□□ 1.55
CBWD3-204ENST00000377349 JARID2Q92833 1246 aaPredicted RBP24.73■■□□□ 1.55
CBWD3-204ENST00000377349 METTL22Q9BUU2 404 aaPredicted RBP24.73■■□□□ 1.55
CBWD3-204ENST00000377349 MRS2Q9HD23 443 aa24.73■■□□□ 1.55
CBWD3-204ENST00000377349 ABHD8Q96I13 439 aa24.72■■□□□ 1.55
CBWD3-204ENST00000377349 TSKSQ9UJT2 592 aa24.72■■□□□ 1.55
CBWD3-204ENST00000377349 ZNF609O15014 1411 aa24.72■■□□□ 1.55
CBWD3-204ENST00000377349 PDE8AO60658 829 aa24.71■■□□□ 1.55
CBWD3-204ENST00000377349 VIL1P09327 827 aaKnown RBP24.71■■□□□ 1.55
CBWD3-204ENST00000377349 BEGAINQ9BUH8 593 aa24.71■■□□□ 1.55
CBWD3-204ENST00000377349 CWC25Q9NXE8 425 aaPredicted RBP24.71■■□□□ 1.55
CBWD3-204ENST00000377349 ZIC5Q96T25 663 aa24.7■■□□□ 1.55
CBWD3-204ENST00000377349 AKAP11Q9UKA4 1901 aa24.7■■□□□ 1.54
CBWD3-204ENST00000377349 UFL1O94874 794 aa24.69■■□□□ 1.54
CBWD3-204ENST00000377349 CCDC152Q4G0S7 254 aa24.69■■□□□ 1.54
CBWD3-204ENST00000377349 CCDC85AQ96PX6 553 aaPredicted RBP24.69■■□□□ 1.54
CBWD3-204ENST00000377349 IGKV5-2P06315 115 aa24.69■■□□□ 1.54
CBWD3-204ENST00000377349 HSP90B1P14625 803 aaKnown RBP24.69■■□□□ 1.54
CBWD3-204ENST00000377349 BRPF1P55201 1214 aaPredicted RBP24.69■■□□□ 1.54
CBWD3-204ENST00000377349 CCDC30Q5VVM6 783 aa24.69■■□□□ 1.54
CBWD3-204ENST00000377349 KRT26Q7Z3Y9 468 aa24.69■■□□□ 1.54
CBWD3-204ENST00000377349 ZC3H12CQ9C0D7 883 aaKnown RBP24.69■■□□□ 1.54
CBWD3-204ENST00000377349 ADM5C9JUS6 153 aa24.68■■□□□ 1.54
CBWD3-204ENST00000377349 ANKIB1Q9P2G1 1089 aa24.68■■□□□ 1.54
CBWD3-204ENST00000377349 GGA1Q9UJY5 639 aa24.68■■□□□ 1.54
CBWD3-204ENST00000377349 MAP3K2Q9Y2U5 619 aa24.68■■□□□ 1.54
CBWD3-204ENST00000377349 ASTN2O75129 1339 aaPredicted RBP24.68■■□□□ 1.54
CBWD3-204ENST00000377349 HUNKP57058 714 aa24.67■■□□□ 1.54
CBWD3-204ENST00000377349 KIF4BQ2VIQ3 1234 aa24.67■■□□□ 1.54
CBWD3-204ENST00000377349 RBM26Q5T8P6 1007 aaKnown RBP24.67■■□□□ 1.54
CBWD3-204ENST00000377349 TSR2Q969E8 191 aaKnown RBP24.67■■□□□ 1.54
CBWD3-204ENST00000377349 DDX58O95786 925 aaKnown RBP24.66■■□□□ 1.54
CBWD3-204ENST00000377349 KSR2Q6VAB6 950 aa24.66■■□□□ 1.54
CBWD3-204ENST00000377349 PI4KAP2A4QPH2 592 aa24.65■■□□□ 1.54
CBWD3-204ENST00000377349 WTIPA6NIX2 430 aaPredicted RBP24.65■■□□□ 1.54
CBWD3-204ENST00000377349 FAM155AB1AL88 458 aaPredicted RBP24.65■■□□□ 1.54
CBWD3-204ENST00000377349 CA12O43570 354 aa24.65■■□□□ 1.54
CBWD3-204ENST00000377349 PI4KAP1Q8N8J0 262 aa24.65■■□□□ 1.54
CBWD3-204ENST00000377349 GMLQ99445 158 aa24.65■■□□□ 1.54
CBWD3-204ENST00000377349 SALL2Q9Y467 1007 aaPredicted RBP24.65■■□□□ 1.54
CBWD3-204ENST00000377349 XDHP47989 1333 aa24.65■■□□□ 1.54
CBWD3-204ENST00000377349 CTSWP56202 376 aa24.64■■□□□ 1.54
CBWD3-204ENST00000377349 ZNF280AP59817 542 aaPredicted RBP24.64■■□□□ 1.54
CBWD3-204ENST00000377349 NOGQ13253 232 aa24.64■■□□□ 1.54
CBWD3-204ENST00000377349 GBA2Q9HCG7 927 aaPredicted RBP24.64■■□□□ 1.54
CBWD3-204ENST00000377349 RSBN1LQ6PCB5 846 aaPredicted RBP24.63■■□□□ 1.53
CBWD3-204ENST00000377349 ANKRD18AQ8IVF6 992 aa24.63■■□□□ 1.53
CBWD3-204ENST00000377349 DCPSQ96C86 337 aaKnown RBP24.63■■□□□ 1.53
CBWD3-204ENST00000377349 GGA3Q9NZ52 723 aa24.63■■□□□ 1.53
CBWD3-204ENST00000377349 AGBL3Q8NEM8 1001 aa24.62■■□□□ 1.53
CBWD3-204ENST00000377349 TTLL11Q8NHH1 800 aa24.62■■□□□ 1.53
CBWD3-204ENST00000377349 A0A1B0GUL6 1792 aa24.62■■□□□ 1.53
CBWD3-204ENST00000377349 CCDC27Q2M243 656 aa24.61■■□□□ 1.53
CBWD3-204ENST00000377349 RGMBQ6NW40 437 aa24.61■■□□□ 1.53
CBWD3-204ENST00000377349 G2E3Q7L622 706 aa24.61■■□□□ 1.53
CBWD3-204ENST00000377349 CHMP4AQ9BY43 222 aa24.61■■□□□ 1.53
CBWD3-204ENST00000377349 ATP2B4P23634 1241 aa24.61■■□□□ 1.53
CBWD3-204ENST00000377349 CWF19L2Q2TBE0 894 aaKnown RBP24.61■■□□□ 1.53
CBWD3-204ENST00000377349 WWC1Q8IX03 1113 aa24.61■■□□□ 1.53
CBWD3-204ENST00000377349 GREM2Q9H772 168 aa24.61■■□□□ 1.53
CBWD3-204ENST00000377349 NEURL1BA8MQ27 555 aa24.6■■□□□ 1.53
CBWD3-204ENST00000377349 MED23Q9ULK4 1368 aa24.59■■□□□ 1.53
CBWD3-204ENST00000377349 PAPPA2Q9BXP8 1791 aa24.59■■□□□ 1.53
CBWD3-204ENST00000377349 G3V3G9 751 aa24.59■■□□□ 1.53
CBWD3-204ENST00000377349 DCAF8Q5TAQ9 597 aa24.59■■□□□ 1.53
CBWD3-204ENST00000377349 C2orf69Q8N8R5 385 aa24.59■■□□□ 1.53
CBWD3-204ENST00000377349 CDCA5Q96FF9 252 aa24.59■■□□□ 1.53
CBWD3-204ENST00000377349 CDC5LQ99459 802 aaKnown RBP24.59■■□□□ 1.53
CBWD3-204ENST00000377349 BSDC1Q9NW68 430 aaPredicted RBP24.59■■□□□ 1.53
CBWD3-204ENST00000377349 MINPP1Q9UNW1 487 aa24.59■■□□□ 1.53
CBWD3-204ENST00000377349 SCARF1Q14162 830 aa24.58■■□□□ 1.53
CBWD3-204ENST00000377349 SULF1Q8IWU6 871 aa24.58■■□□□ 1.53
CBWD3-204ENST00000377349 H7C1W4 665 aa24.57■■□□□ 1.52
CBWD3-204ENST00000377349 TWISTNBQ3B726 338 aaPredicted RBP24.57■■□□□ 1.52
CBWD3-204ENST00000377349 ANGEL2Q5VTE6 544 aaKnown RBP24.57■■□□□ 1.52
CBWD3-204ENST00000377349 PODNQ7Z5L7 613 aa24.57■■□□□ 1.52
CBWD3-204ENST00000377349 STK31Q9BXU1 1019 aa24.57■■□□□ 1.52
CBWD3-204ENST00000377349 USP17L3A6NCW0 530 aa24.56■■□□□ 1.52
CBWD3-204ENST00000377349 USP17L4A6NCW7 530 aa24.56■■□□□ 1.52
CBWD3-204ENST00000377349 USP17L1Q7RTZ2 530 aa24.56■■□□□ 1.52
CBWD3-204ENST00000377349 FAM9BQ8IZU0 186 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms