RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 CHRNA5P30532 468 aa15.96■□□□□ 0.14
CBWD3-203ENST00000377344 HOXA10P31260 410 aaPredicted RBP15.96■□□□□ 0.14
CBWD3-203ENST00000377344 C16orf71Q8IYS4 520 aaPredicted RBP15.96■□□□□ 0.14
CBWD3-203ENST00000377344 SGIP1Q9BQI5 828 aa15.96■□□□□ 0.14
CBWD3-203ENST00000377344 BSDC1Q9NW68 430 aaPredicted RBP15.96■□□□□ 0.14
CBWD3-203ENST00000377344 PTGER2P43116 358 aa15.95■□□□□ 0.14
CBWD3-203ENST00000377344 CRAMP1Q96RY5 1269 aa15.95■□□□□ 0.14
CBWD3-203ENST00000377344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.95■□□□□ 0.14
CBWD3-203ENST00000377344 MROH5Q6ZUA9 1318 aa15.95■□□□□ 0.14
CBWD3-203ENST00000377344 LRP5O75197 1615 aa15.95■□□□□ 0.14
CBWD3-203ENST00000377344 COL11A2P13942 1736 aaPredicted RBP15.95■□□□□ 0.14
CBWD3-203ENST00000377344 ALDH1B1P30837 517 aa15.94■□□□□ 0.14
CBWD3-203ENST00000377344 AACSQ86V21 672 aa15.94■□□□□ 0.14
CBWD3-203ENST00000377344 HELBQ8NG08 1087 aaPredicted RBP15.94■□□□□ 0.14
CBWD3-203ENST00000377344 IFIT2P09913 472 aaKnown RBP15.94■□□□□ 0.14
CBWD3-203ENST00000377344 PDE4AP27815 886 aa15.94■□□□□ 0.14
CBWD3-203ENST00000377344 TAF5LO75529 589 aa15.93■□□□□ 0.14
CBWD3-203ENST00000377344 BBOX1O75936 387 aa15.93■□□□□ 0.14
CBWD3-203ENST00000377344 CHRNDQ07001 517 aa15.93■□□□□ 0.14
CBWD3-203ENST00000377344 TNNI3KQ59H18 835 aa15.93■□□□□ 0.14
CBWD3-203ENST00000377344 MINPP1Q9UNW1 487 aa15.93■□□□□ 0.14
CBWD3-203ENST00000377344 FPGT-TNNI3KV9GXZ4 949 aa15.93■□□□□ 0.14
CBWD3-203ENST00000377344 A0A0G2JLW4 131 aa15.92■□□□□ 0.14
CBWD3-203ENST00000377344 PPEF1O14829 653 aaPredicted RBP15.92■□□□□ 0.14
CBWD3-203ENST00000377344 STYK1Q6J9G0 422 aa15.92■□□□□ 0.14
CBWD3-203ENST00000377344 OTUD7AQ8TE49 926 aaPredicted RBP15.92■□□□□ 0.14
CBWD3-203ENST00000377344 EAF2Q96CJ1 260 aaPredicted RBP15.92■□□□□ 0.14
CBWD3-203ENST00000377344 NEUROD6Q96NK8 337 aa15.92■□□□□ 0.14
CBWD3-203ENST00000377344 CCDC8Q9H0W5 538 aaPredicted RBP15.92■□□□□ 0.14
CBWD3-203ENST00000377344 AKAP2Q9Y2D5 859 aa15.92■□□□□ 0.14
CBWD3-203ENST00000377344 PDE8BO95263 885 aa15.91■□□□□ 0.14
CBWD3-203ENST00000377344 DPEP1P16444 411 aa15.91■□□□□ 0.14
CBWD3-203ENST00000377344 TIMM10P62072 90 aa15.91■□□□□ 0.14
CBWD3-203ENST00000377344 CNKSR1Q969H4 720 aa15.91■□□□□ 0.14
CBWD3-203ENST00000377344 ANKIB1Q9P2G1 1089 aa15.91■□□□□ 0.14
CBWD3-203ENST00000377344 A0A1B0GUL7 405 aa15.9■□□□□ 0.14
CBWD3-203ENST00000377344 TGFB2P61812 414 aa15.9■□□□□ 0.14
CBWD3-203ENST00000377344 ATP2B3Q16720 1220 aa15.9■□□□□ 0.14
CBWD3-203ENST00000377344 SLC51AQ86UW1 340 aa15.9■□□□□ 0.14
CBWD3-203ENST00000377344 VGLL2Q8N8G2 317 aa15.9■□□□□ 0.14
CBWD3-203ENST00000377344 TMX4Q9H1E5 349 aaPredicted RBP15.9■□□□□ 0.14
CBWD3-203ENST00000377344 GPR108Q9NPR9 543 aa15.9■□□□□ 0.14
CBWD3-203ENST00000377344 KIF13BQ9NQT8 1826 aa15.9■□□□□ 0.14
CBWD3-203ENST00000377344 CACNA1SQ13698 1873 aa15.9■□□□□ 0.14
CBWD3-203ENST00000377344 MX1P20591 662 aa15.89■□□□□ 0.13
CBWD3-203ENST00000377344 KCNJ4P48050 445 aa15.89■□□□□ 0.13
CBWD3-203ENST00000377344 PUM3Q15397 648 aaKnown RBP15.89■□□□□ 0.13
CBWD3-203ENST00000377344 PRPF40BQ6NWY9 871 aaKnown RBP15.89■□□□□ 0.13
CBWD3-203ENST00000377344 TMC4Q7Z404 712 aa15.89■□□□□ 0.13
CBWD3-203ENST00000377344 PLEKHM2Q8IWE5 1019 aa15.89■□□□□ 0.13
CBWD3-203ENST00000377344 ANKRD2Q9GZV1 360 aa15.89■□□□□ 0.13
CBWD3-203ENST00000377344 TLR7Q9NYK1 1049 aaKnown RBP15.89■□□□□ 0.13
CBWD3-203ENST00000377344 ZNF219Q9P2Y4 722 aaPredicted RBP15.89■□□□□ 0.13
CBWD3-203ENST00000377344 CD2APQ9Y5K6 639 aa15.89■□□□□ 0.13
CBWD3-203ENST00000377344 ZNF609O15014 1411 aa15.89■□□□□ 0.13
CBWD3-203ENST00000377344 SNAP23O00161 211 aa15.89■□□□□ 0.13
CBWD3-203ENST00000377344 TSHZ3Q63HK5 1081 aa15.89■□□□□ 0.13
CBWD3-203ENST00000377344 GORABQ5T7V8 394 aa15.88■□□□□ 0.13
CBWD3-203ENST00000377344 GPATCH3Q96I76 525 aa15.88■□□□□ 0.13
CBWD3-203ENST00000377344 DBNDD2Q9BQY9 259 aa15.88■□□□□ 0.13
CBWD3-203ENST00000377344 WWC3Q9ULE0 1092 aa15.88■□□□□ 0.13
CBWD3-203ENST00000377344 NSFL1CQ9UNZ2 370 aaKnown RBP15.88■□□□□ 0.13
CBWD3-203ENST00000377344 ATP6V0A2Q9Y487 856 aa15.88■□□□□ 0.13
CBWD3-203ENST00000377344 SLC5A1P13866 664 aa15.87■□□□□ 0.13
CBWD3-203ENST00000377344 SP8Q8IXZ3 490 aa15.87■□□□□ 0.13
CBWD3-203ENST00000377344 TTLL6Q8N841 843 aa15.87■□□□□ 0.13
CBWD3-203ENST00000377344 LPIN2Q92539 896 aa15.87■□□□□ 0.13
CBWD3-203ENST00000377344 DBNLQ9UJU6 430 aaKnown RBP15.87■□□□□ 0.13
CBWD3-203ENST00000377344 IFIT1P09914 478 aaKnown RBP15.87■□□□□ 0.13
CBWD3-203ENST00000377344 KCNA3P22001 575 aa15.87■□□□□ 0.13
CBWD3-203ENST00000377344 PDE1AP54750 535 aa15.87■□□□□ 0.13
CBWD3-203ENST00000377344 GPSM2P81274 684 aa15.87■□□□□ 0.13
CBWD3-203ENST00000377344 OLFM4Q6UX06 510 aa15.87■□□□□ 0.13
CBWD3-203ENST00000377344 XAGE2Q96GT9 111 aa15.87■□□□□ 0.13
CBWD3-203ENST00000377344 PIM2Q9P1W9 311 aa15.87■□□□□ 0.13
CBWD3-203ENST00000377344 XDHP47989 1333 aa15.87■□□□□ 0.13
CBWD3-203ENST00000377344 DLEC1Q9Y238 1755 aa15.86■□□□□ 0.13
CBWD3-203ENST00000377344 WTIPA6NIX2 430 aaPredicted RBP15.86■□□□□ 0.13
CBWD3-203ENST00000377344 FGFR2P21802 821 aa15.86■□□□□ 0.13
CBWD3-203ENST00000377344 ADORA1P30542 326 aa15.86■□□□□ 0.13
CBWD3-203ENST00000377344 SALL3Q9BXA9 1300 aa15.86■□□□□ 0.13
CBWD3-203ENST00000377344 A0A1B0GUL6 1792 aa15.86■□□□□ 0.13
CBWD3-203ENST00000377344 SLX4Q8IY92 1834 aa15.85■□□□□ 0.13
CBWD3-203ENST00000377344 UBE4AQ14139 1066 aa15.85■□□□□ 0.13
CBWD3-203ENST00000377344 ECHDC1Q9NTX5 307 aa15.85■□□□□ 0.13
CBWD3-203ENST00000377344 ZNF804BA4D1E1 1349 aa15.85■□□□□ 0.13
CBWD3-203ENST00000377344 FHDC1Q9C0D6 1143 aaPredicted RBP15.84■□□□□ 0.13
CBWD3-203ENST00000377344 STAP2Q9UGK3 403 aa15.84■□□□□ 0.13
CBWD3-203ENST00000377344 GGA1Q9UJY5 639 aa15.84■□□□□ 0.13
CBWD3-203ENST00000377344 TTC41PQ6P2S7 1318 aa15.84■□□□□ 0.13
CBWD3-203ENST00000377344 ERC2O15083 957 aa15.84■□□□□ 0.13
CBWD3-203ENST00000377344 C21orf2O43822 256 aa15.84■□□□□ 0.13
CBWD3-203ENST00000377344 UFL1O94874 794 aa15.84■□□□□ 0.13
CBWD3-203ENST00000377344 CCDC158Q5M9N0 1113 aa15.84■□□□□ 0.13
CBWD3-203ENST00000377344 DPP8Q6V1X1 898 aaPredicted RBP15.84■□□□□ 0.13
CBWD3-203ENST00000377344 MPNDQ8N594 471 aa15.84■□□□□ 0.13
CBWD3-203ENST00000377344 NLGN2Q8NFZ4 835 aa15.84■□□□□ 0.13
CBWD3-203ENST00000377344 KIAA1551Q9HCM1 1747 aa15.84■□□□□ 0.13
CBWD3-203ENST00000377344 LRRC37AA6NMS7 1700 aa15.83■□□□□ 0.13
CBWD3-203ENST00000377344 C6orf229H3BNL8 230 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms