RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 SCNN1AP37088 669 aa7.54□□□□□ -1.2
SSX1-201ENST00000376919 CLDN10P78369 228 aa7.54□□□□□ -1.2
SSX1-201ENST00000376919 KCNC4Q03721 635 aa7.54□□□□□ -1.2
SSX1-201ENST00000376919 SF3A1Q15459 793 aaKnown RBP7.54□□□□□ -1.2
SSX1-201ENST00000376919 CC2D1BQ5T0F9 858 aaKnown RBP7.54□□□□□ -1.2
SSX1-201ENST00000376919 ZBTB33Q86T24 672 aa7.54□□□□□ -1.2
SSX1-201ENST00000376919 ASB16Q96NS5 453 aa7.54□□□□□ -1.2
SSX1-201ENST00000376919 CARD14Q9BXL6 1004 aa7.54□□□□□ -1.2
SSX1-201ENST00000376919 QTRT2Q9H974 415 aaKnown RBP7.54□□□□□ -1.2
SSX1-201ENST00000376919 CXXC1Q9P0U4 656 aaPredicted RBP7.54□□□□□ -1.2
SSX1-201ENST00000376919 NOD1Q9Y239 953 aa7.54□□□□□ -1.2
SSX1-201ENST00000376919 PCDHB9Q9Y5E1 797 aa7.54□□□□□ -1.2
SSX1-201ENST00000376919 WNK3Q9BYP7 1800 aa7.54□□□□□ -1.2
SSX1-201ENST00000376919 PRMT3O60678 531 aa7.53□□□□□ -1.2
SSX1-201ENST00000376919 MAPK1P28482 360 aa7.53□□□□□ -1.2
SSX1-201ENST00000376919 COL19A1Q14993 1142 aa7.53□□□□□ -1.2
SSX1-201ENST00000376919 RRS1Q15050 365 aaKnown RBP7.53□□□□□ -1.2
SSX1-201ENST00000376919 TOM1L2Q6ZVM7 507 aa7.53□□□□□ -1.2
SSX1-201ENST00000376919 SH3RF1Q7Z6J0 888 aa7.53□□□□□ -1.2
SSX1-201ENST00000376919 SIX5Q8N196 739 aa7.53□□□□□ -1.2
SSX1-201ENST00000376919 BAP1Q92560 729 aa7.53□□□□□ -1.2
SSX1-201ENST00000376919 RNF166Q96A37 237 aaPredicted RBP7.53□□□□□ -1.2
SSX1-201ENST00000376919 LTV1Q96GA3 475 aaPredicted RBP7.53□□□□□ -1.2
SSX1-201ENST00000376919 DCTN4Q9UJW0 460 aa7.53□□□□□ -1.2
SSX1-201ENST00000376919 RBM19Q9Y4C8 960 aaKnown RBP7.53□□□□□ -1.2
SSX1-201ENST00000376919 RTL1A6NKG5 1358 aa7.53□□□□□ -1.2
SSX1-201ENST00000376919 AATKQ6ZMQ8 1374 aa7.53□□□□□ -1.2
SSX1-201ENST00000376919 COL5A2P05997 1499 aaPredicted RBP7.53□□□□□ -1.2
SSX1-201ENST00000376919 CAMTA1Q9Y6Y1 1673 aa7.53□□□□□ -1.2
SSX1-201ENST00000376919 ATRNO75882 1429 aa7.52□□□□□ -1.2
SSX1-201ENST00000376919 BLMP54132 1417 aaPredicted RBP7.52□□□□□ -1.2
SSX1-201ENST00000376919 COL18A1P39060 1754 aa7.52□□□□□ -1.21
SSX1-201ENST00000376919 BCL9LQ86UU0 1499 aa7.52□□□□□ -1.21
SSX1-201ENST00000376919 RBM6P78332 1123 aaKnown RBP7.52□□□□□ -1.21
SSX1-201ENST00000376919 DDX10Q13206 875 aaKnown RBP7.52□□□□□ -1.21
SSX1-201ENST00000376919 ZNF211Q13398 564 aaPredicted RBP7.52□□□□□ -1.21
SSX1-201ENST00000376919 OCLNQ16625 522 aa7.52□□□□□ -1.21
SSX1-201ENST00000376919 TRAF7Q6Q0C0 670 aa7.52□□□□□ -1.21
SSX1-201ENST00000376919 ZSCAN29Q8IWY8 852 aaPredicted RBP7.52□□□□□ -1.21
SSX1-201ENST00000376919 ZNF511Q8NB15 262 aa7.52□□□□□ -1.21
SSX1-201ENST00000376919 CRB1P82279 1406 aa7.52□□□□□ -1.21
SSX1-201ENST00000376919 MAP3K19Q56UN5 1328 aa7.52□□□□□ -1.21
SSX1-201ENST00000376919 GLI3P10071 1580 aa7.51□□□□□ -1.21
SSX1-201ENST00000376919 FLT4P35916 1363 aa7.51□□□□□ -1.21
SSX1-201ENST00000376919 C21orf2O43822 256 aa7.51□□□□□ -1.21
SSX1-201ENST00000376919 SEC13P55735 322 aa7.51□□□□□ -1.21
SSX1-201ENST00000376919 VPS72Q15906 364 aa7.51□□□□□ -1.21
SSX1-201ENST00000376919 LINC01559Q495D7 138 aa7.51□□□□□ -1.21
SSX1-201ENST00000376919 POTEAQ6S8J7 498 aa7.51□□□□□ -1.21
SSX1-201ENST00000376919 ARHGEF25Q86VW2 580 aa7.51□□□□□ -1.21
SSX1-201ENST00000376919 BPHLQ86WA6 291 aaPredicted RBP7.51□□□□□ -1.21
SSX1-201ENST00000376919 SPNS2Q8IVW8 549 aa7.51□□□□□ -1.21
SSX1-201ENST00000376919 UBXN4Q92575 508 aa7.51□□□□□ -1.21
SSX1-201ENST00000376919 NLRP2Q9NX02 1062 aa7.51□□□□□ -1.21
SSX1-201ENST00000376919 RGS17Q9UGC6 210 aaPredicted RBP7.51□□□□□ -1.21
SSX1-201ENST00000376919 PEAK1Q9H792 1746 aa7.51□□□□□ -1.21
SSX1-201ENST00000376919 RGPD2P0DJD1 1756 aa7.51□□□□□ -1.21
SSX1-201ENST00000376919 PARP4Q9UKK3 1724 aaKnown RBP7.5□□□□□ -1.21
SSX1-201ENST00000376919 PPEF1O14829 653 aaPredicted RBP7.5□□□□□ -1.21
SSX1-201ENST00000376919 DKK1O94907 266 aa7.5□□□□□ -1.21
SSX1-201ENST00000376919 NAALADL2Q58DX5 795 aa7.5□□□□□ -1.21
SSX1-201ENST00000376919 ANKRD24Q8TF21 1146 aa7.5□□□□□ -1.21
SSX1-201ENST00000376919 FOXJ1Q92949 421 aa7.5□□□□□ -1.21
SSX1-201ENST00000376919 RGS12O14924 1447 aa7.5□□□□□ -1.21
SSX1-201ENST00000376919 WDR17Q8IZU2 1322 aa7.5□□□□□ -1.21
SSX1-201ENST00000376919 CDK12Q9NYV4 1490 aaPredicted RBP7.49□□□□□ -1.21
SSX1-201ENST00000376919 MAGEB6P1A0A0J9YX57 407 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 RNF223E7ERA6 249 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 FBLN1P23142 703 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 HOXC9P31274 260 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 SF3B2Q13435 895 aaKnown RBP7.49□□□□□ -1.21
SSX1-201ENST00000376919 AGERQ15109 404 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 TSNAXIP1Q2TAA8 658 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 DZIP3Q86Y13 1208 aaKnown RBP7.49□□□□□ -1.21
SSX1-201ENST00000376919 ANKLE1Q8NAG6 615 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 IP6K1Q92551 441 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 PRIMPOLQ96LW4 560 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 ANO2Q9NQ90 1003 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 DOLKQ9UPQ8 538 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 EMILIN1Q9Y6C2 1016 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 BRWD3Q6RI45 1802 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 LRRC37A3O60309 1634 aa7.49□□□□□ -1.21
SSX1-201ENST00000376919 KIF24Q5T7B8 1368 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 GGCXP38435 758 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 SH3BP2P78314 561 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 GTF2IP78347 998 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 TAGLNQ01995 201 aaKnown RBP7.48□□□□□ -1.21
SSX1-201ENST00000376919 ERFEQ4G0M1 354 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 EAPPQ56P03 285 aaPredicted RBP7.48□□□□□ -1.21
SSX1-201ENST00000376919 ILDR2Q71H61 639 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 TCP11L2Q8N4U5 519 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 SPATA32Q96LK8 384 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 CFAP53Q96M91 514 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 C1QTNF2Q9BXJ5 285 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 KIAA1024Q9UPX6 916 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 SPATA31A1Q5TZJ5 1347 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 SPATA31A5Q5VU36 1347 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 SPATA31A7Q8IWB4 1347 aa7.48□□□□□ -1.21
SSX1-201ENST00000376919 THSD7AQ9UPZ6 1657 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms