RNA–Protein interactions for RNA: ENST00000376389.7

FLOT1-201, Transcript of flotillin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FLOT1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-201ENST00000376389 LSG1Q9H089 658 aaKnown RBP27.39■■□□□ 1.98
FLOT1-201ENST00000376389 RGS17Q9UGC6 210 aaPredicted RBP27.39■■□□□ 1.98
FLOT1-201ENST00000376389 PALD1Q9ULE6 856 aa27.39■■□□□ 1.98
FLOT1-201ENST00000376389 IFIT1P09914 478 aaKnown RBP27.39■■□□□ 1.97
FLOT1-201ENST00000376389 SNX21Q969T3 373 aa27.39■■□□□ 1.97
FLOT1-201ENST00000376389 MPHOSPH8Q99549 860 aa27.39■■□□□ 1.97
FLOT1-201ENST00000376389 LRP5O75197 1615 aa27.38■■□□□ 1.97
FLOT1-201ENST00000376389 COL4A1P02462 1669 aa27.38■■□□□ 1.97
FLOT1-201ENST00000376389 GOLIM4O00461 696 aa27.38■■□□□ 1.97
FLOT1-201ENST00000376389 PDE8BO95263 885 aa27.38■■□□□ 1.97
FLOT1-201ENST00000376389 CHGBP05060 677 aa27.38■■□□□ 1.97
FLOT1-201ENST00000376389 RABEP1Q15276 862 aa27.38■■□□□ 1.97
FLOT1-201ENST00000376389 A0A0D9SFI3 127 aa27.37■■□□□ 1.97
FLOT1-201ENST00000376389 HIP1O00291 1037 aa27.37■■□□□ 1.97
FLOT1-201ENST00000376389 TTC39AQ5SRH9 613 aa27.37■■□□□ 1.97
FLOT1-201ENST00000376389 KIAA1211Q6ZU35 1233 aa27.37■■□□□ 1.97
FLOT1-201ENST00000376389 NYXQ9GZU5 481 aa27.37■■□□□ 1.97
FLOT1-201ENST00000376389 MCCP23508 829 aa27.37■■□□□ 1.97
FLOT1-201ENST00000376389 CCDC158Q5M9N0 1113 aa27.37■■□□□ 1.97
FLOT1-201ENST00000376389 RTL9Q8NET4 1388 aa27.37■■□□□ 1.97
FLOT1-201ENST00000376389 SPEF2Q9C093 1822 aa27.37■■□□□ 1.97
FLOT1-201ENST00000376389 IGHMBP2P38935 993 aaKnown RBP27.36■■□□□ 1.97
FLOT1-201ENST00000376389 PAG1Q9NWQ8 432 aa27.36■■□□□ 1.97
FLOT1-201ENST00000376389 UBR3Q6ZT12 1888 aa27.36■■□□□ 1.97
FLOT1-201ENST00000376389 COL24A1Q17RW2 1714 aa27.36■■□□□ 1.97
FLOT1-201ENST00000376389 MROH5Q6ZUA9 1318 aa27.35■■□□□ 1.97
FLOT1-201ENST00000376389 SNAP23O00161 211 aa27.35■■□□□ 1.97
FLOT1-201ENST00000376389 TAF5LO75529 589 aa27.35■■□□□ 1.97
FLOT1-201ENST00000376389 APBA3O96018 575 aa27.35■■□□□ 1.97
FLOT1-201ENST00000376389 PTH1RQ03431 593 aa27.35■■□□□ 1.97
FLOT1-201ENST00000376389 SLC10A5Q5PT55 438 aa27.35■■□□□ 1.97
FLOT1-201ENST00000376389 SLKQ9H2G2 1235 aaPredicted RBP27.35■■□□□ 1.97
FLOT1-201ENST00000376389 SNRKQ9NRH2 765 aa27.35■■□□□ 1.97
FLOT1-201ENST00000376389 RAD50Q92878 1312 aa27.35■■□□□ 1.97
FLOT1-201ENST00000376389 SF3B3Q15393 1217 aaKnown RBP27.35■■□□□ 1.97
FLOT1-201ENST00000376389 POTEAQ6S8J7 498 aa27.35■■□□□ 1.97
FLOT1-201ENST00000376389 ADRA2BP18089 450 aa27.34■■□□□ 1.97
FLOT1-201ENST00000376389 SCARF1Q14162 830 aa27.34■■□□□ 1.97
FLOT1-201ENST00000376389 NFIXQ14938 502 aa27.34■■□□□ 1.97
FLOT1-201ENST00000376389 TPTE2Q6XPS3 522 aa27.34■■□□□ 1.97
FLOT1-201ENST00000376389 ANTXR1Q9H6X2 564 aa27.33■■□□□ 1.97
FLOT1-201ENST00000376389 CASZ1Q86V15 1759 aa27.33■■□□□ 1.97
FLOT1-201ENST00000376389 FKBP4Q02790 459 aaKnown RBP eCLIP27.33■■□□□ 1.97
FLOT1-201ENST00000376389 KBTBD3Q8NAB2 608 aa27.33■■□□□ 1.97
FLOT1-201ENST00000376389 HSPA4P34932 840 aa27.32■■□□□ 1.96
FLOT1-201ENST00000376389 TAF1P21675 1872 aa27.32■■□□□ 1.96
FLOT1-201ENST00000376389 PUM3Q15397 648 aaKnown RBP27.31■■□□□ 1.96
FLOT1-201ENST00000376389 SLFNL1Q499Z3 407 aa27.31■■□□□ 1.96
FLOT1-201ENST00000376389 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.31■■□□□ 1.96
FLOT1-201ENST00000376389 CDC5LQ99459 802 aaKnown RBP27.31■■□□□ 1.96
FLOT1-201ENST00000376389 NPHP1O15259 732 aa27.31■■□□□ 1.96
FLOT1-201ENST00000376389 EPB41L2O43491 1005 aaKnown RBP27.31■■□□□ 1.96
FLOT1-201ENST00000376389 PI16Q6UXB8 463 aa27.31■■□□□ 1.96
FLOT1-201ENST00000376389 GYS1P13807 737 aa27.3■■□□□ 1.96
FLOT1-201ENST00000376389 FGFR2P21802 821 aa27.3■■□□□ 1.96
FLOT1-201ENST00000376389 SSFA2P28290 1259 aa27.3■■□□□ 1.96
FLOT1-201ENST00000376389 ZNF589Q86UQ0 364 aaPredicted RBP27.3■■□□□ 1.96
FLOT1-201ENST00000376389 NLRP3Q96P20 1036 aa27.3■■□□□ 1.96
FLOT1-201ENST00000376389 CHRNDQ07001 517 aa27.29■■□□□ 1.96
FLOT1-201ENST00000376389 ANKRD18AQ8IVF6 992 aa27.29■■□□□ 1.96
FLOT1-201ENST00000376389 SEC62Q99442 399 aaKnown RBP27.29■■□□□ 1.96
FLOT1-201ENST00000376389 ZAP70P43403 619 aa27.29■■□□□ 1.96
FLOT1-201ENST00000376389 LPIN2Q92539 896 aa27.29■■□□□ 1.96
FLOT1-201ENST00000376389 CELF1Q92879 486 aaKnown RBP27.29■■□□□ 1.96
FLOT1-201ENST00000376389 CCDC171Q6TFL3 1326 aa27.28■■□□□ 1.96
FLOT1-201ENST00000376389 PLSCR1O15162 318 aa27.28■■□□□ 1.96
FLOT1-201ENST00000376389 ANAPC15P60006 121 aa27.28■■□□□ 1.96
FLOT1-201ENST00000376389 CARMIL3Q8ND23 1372 aa27.28■■□□□ 1.96
FLOT1-201ENST00000376389 MED23Q9ULK4 1368 aa27.28■■□□□ 1.96
FLOT1-201ENST00000376389 K7ELQ4 463 aaPredicted RBP27.28■■□□□ 1.96
FLOT1-201ENST00000376389 PHKA1P46020 1223 aa27.28■■□□□ 1.96
FLOT1-201ENST00000376389 ZNF827Q17R98 1081 aa27.28■■□□□ 1.96
FLOT1-201ENST00000376389 CCDC129Q6ZRS4 1044 aa27.28■■□□□ 1.96
FLOT1-201ENST00000376389 RFX7Q2KHR2 1363 aa27.27■■□□□ 1.96
FLOT1-201ENST00000376389 MCAMP43121 646 aa27.27■■□□□ 1.96
FLOT1-201ENST00000376389 CCDC102BQ68D86 513 aa27.27■■□□□ 1.96
FLOT1-201ENST00000376389 RASEFQ8IZ41 740 aa27.27■■□□□ 1.96
FLOT1-201ENST00000376389 SLC5A1P13866 664 aa27.26■■□□□ 1.95
FLOT1-201ENST00000376389 NEK4P51957 841 aa27.26■■□□□ 1.95
FLOT1-201ENST00000376389 ANP32EQ9BTT0 268 aa27.26■■□□□ 1.95
FLOT1-201ENST00000376389 SNX14Q9Y5W7 946 aa27.26■■□□□ 1.95
FLOT1-201ENST00000376389 FBXO41Q8TF61 875 aa27.26■■□□□ 1.95
FLOT1-201ENST00000376389 TFCP2L1Q9NZI6 479 aa27.25■■□□□ 1.95
FLOT1-201ENST00000376389 ST18O60284 1047 aa27.24■■□□□ 1.95
FLOT1-201ENST00000376389 PRPF40BQ6NWY9 871 aaKnown RBP27.24■■□□□ 1.95
FLOT1-201ENST00000376389 CNBD1Q8NA66 436 aa27.24■■□□□ 1.95
FLOT1-201ENST00000376389 FOXD4L1Q9NU39 408 aa27.24■■□□□ 1.95
FLOT1-201ENST00000376389 BSDC1Q9NW68 430 aaPredicted RBP27.24■■□□□ 1.95
FLOT1-201ENST00000376389 RBM8AQ9Y5S9 174 aaKnown RBP27.24■■□□□ 1.95
FLOT1-201ENST00000376389 WTIPA6NIX2 430 aaPredicted RBP27.24■■□□□ 1.95
FLOT1-201ENST00000376389 MAP4K1Q92918 833 aa27.24■■□□□ 1.95
FLOT1-201ENST00000376389 TNRC6CQ9HCJ0 1690 aaKnown RBP27.24■■□□□ 1.95
FLOT1-201ENST00000376389 NBR1Q14596 966 aa27.23■■□□□ 1.95
FLOT1-201ENST00000376389 MCMDC2Q4G0Z9 681 aa27.23■■□□□ 1.95
FLOT1-201ENST00000376389 IL17RAQ96F46 866 aa27.23■■□□□ 1.95
FLOT1-201ENST00000376389 UPF3BQ9BZI7 483 aaKnown RBP27.23■■□□□ 1.95
FLOT1-201ENST00000376389 KCNJ4P48050 445 aa27.22■■□□□ 1.95
FLOT1-201ENST00000376389 MINPP1Q9UNW1 487 aa27.22■■□□□ 1.95
FLOT1-201ENST00000376389 RNF113AO15541 343 aaKnown RBP27.22■■□□□ 1.95
FLOT1-201ENST00000376389 TM4SF1P30408 202 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms