RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 LAMA4Q16363 1823 aa22.46■■□□□ 1.19
PPP1R3F-202ENST00000376188 TOB2Q14106 344 aaPredicted RBP22.46■■□□□ 1.19
PPP1R3F-202ENST00000376188 CCDC129Q6ZRS4 1044 aa22.46■■□□□ 1.19
PPP1R3F-202ENST00000376188 NECAB1Q8N987 351 aa22.46■■□□□ 1.19
PPP1R3F-202ENST00000376188 TRIM44Q96DX7 344 aaPredicted RBP22.46■■□□□ 1.19
PPP1R3F-202ENST00000376188 PUS3Q9BZE2 481 aaKnown RBP22.46■■□□□ 1.19
PPP1R3F-202ENST00000376188 NUP98P52948 1817 aa22.45■■□□□ 1.19
PPP1R3F-202ENST00000376188 SYCE3A1L190 88 aa22.45■■□□□ 1.18
PPP1R3F-202ENST00000376188 CSF1RP07333 972 aa22.45■■□□□ 1.18
PPP1R3F-202ENST00000376188 PDCP20941 246 aa22.45■■□□□ 1.18
PPP1R3F-202ENST00000376188 CSPP1Q1MSJ5 1256 aa22.45■■□□□ 1.18
PPP1R3F-202ENST00000376188 GDPD2Q9HCC8 539 aa22.45■■□□□ 1.18
PPP1R3F-202ENST00000376188 EXOC5O00471 708 aa22.45■■□□□ 1.18
PPP1R3F-202ENST00000376188 PHF14O94880 888 aa22.45■■□□□ 1.18
PPP1R3F-202ENST00000376188 FAM89AQ96GI7 184 aa22.45■■□□□ 1.18
PPP1R3F-202ENST00000376188 PPP1R9BQ96SB3 815 aa22.45■■□□□ 1.18
PPP1R3F-202ENST00000376188 DSCC1Q9BVC3 393 aa22.45■■□□□ 1.18
PPP1R3F-202ENST00000376188 IFIT5Q13325 482 aaKnown RBP22.44■■□□□ 1.18
PPP1R3F-202ENST00000376188 ZMYM1Q5SVZ6 1142 aa22.44■■□□□ 1.18
PPP1R3F-202ENST00000376188 CNPY2Q9Y2B0 182 aa22.44■■□□□ 1.18
PPP1R3F-202ENST00000376188 LRRFIP1Q32MZ4 808 aaKnown RBP22.43■■□□□ 1.18
PPP1R3F-202ENST00000376188 TAF7LQ5H9L4 462 aa22.43■■□□□ 1.18
PPP1R3F-202ENST00000376188 DOT1LQ8TEK3 1739 aa22.43■■□□□ 1.18
PPP1R3F-202ENST00000376188 CYP21A2P08686 494 aa22.43■■□□□ 1.18
PPP1R3F-202ENST00000376188 CYP19A1P11511 503 aaPredicted RBP22.43■■□□□ 1.18
PPP1R3F-202ENST00000376188 COL9A3Q14050 684 aaPredicted RBP22.43■■□□□ 1.18
PPP1R3F-202ENST00000376188 CCDC158Q5M9N0 1113 aa22.43■■□□□ 1.18
PPP1R3F-202ENST00000376188 TCEANC2Q96MN5 208 aa22.43■■□□□ 1.18
PPP1R3F-202ENST00000376188 RBSNQ9H1K0 784 aa22.43■■□□□ 1.18
PPP1R3F-202ENST00000376188 RRAGDQ9NQL2 400 aaPredicted RBP22.43■■□□□ 1.18
PPP1R3F-202ENST00000376188 GADD45BO75293 160 aaPredicted RBP22.42■■□□□ 1.18
PPP1R3F-202ENST00000376188 CHGBP05060 677 aa22.42■■□□□ 1.18
PPP1R3F-202ENST00000376188 MYH7P12883 1935 aa22.42■■□□□ 1.18
PPP1R3F-202ENST00000376188 HMGB1P09429 215 aaKnown RBP22.42■■□□□ 1.18
PPP1R3F-202ENST00000376188 RNF113AO15541 343 aaKnown RBP22.41■■□□□ 1.18
PPP1R3F-202ENST00000376188 UBE2HP62256 183 aa22.41■■□□□ 1.18
PPP1R3F-202ENST00000376188 LARP1BQ659C4 914 aaKnown RBP22.41■■□□□ 1.18
PPP1R3F-202ENST00000376188 NLRP10Q86W26 655 aa22.41■■□□□ 1.18
PPP1R3F-202ENST00000376188 ABCC12Q96J65 1359 aa22.41■■□□□ 1.18
PPP1R3F-202ENST00000376188 VPS37CA5D8V6 355 aaPredicted RBP22.4■■□□□ 1.18
PPP1R3F-202ENST00000376188 TTC39AQ5SRH9 613 aa22.4■■□□□ 1.18
PPP1R3F-202ENST00000376188 GORABQ5T7V8 394 aa22.4■■□□□ 1.18
PPP1R3F-202ENST00000376188 SLC4A9Q96Q91 983 aa22.4■■□□□ 1.18
PPP1R3F-202ENST00000376188 HLFQ16534 295 aa22.4■■□□□ 1.18
PPP1R3F-202ENST00000376188 XAGE2Q96GT9 111 aa22.4■■□□□ 1.18
PPP1R3F-202ENST00000376188 CDCA7Q9BWT1 371 aaPredicted RBP22.4■■□□□ 1.18
PPP1R3F-202ENST00000376188 ZBTB1Q9Y2K1 713 aa22.39■■□□□ 1.17
PPP1R3F-202ENST00000376188 MAST3O60307 1309 aa22.38■■□□□ 1.17
PPP1R3F-202ENST00000376188 ERVV-1B6SEH8 477 aa22.38■■□□□ 1.17
PPP1R3F-202ENST00000376188 IL6STP40189 918 aaPredicted RBP22.38■■□□□ 1.17
PPP1R3F-202ENST00000376188 GTF3C6Q969F1 213 aa22.38■■□□□ 1.17
PPP1R3F-202ENST00000376188 SYTL4Q96C24 671 aaPredicted RBP22.38■■□□□ 1.17
PPP1R3F-202ENST00000376188 RIC1Q4ADV7 1423 aa22.38■■□□□ 1.17
PPP1R3F-202ENST00000376188 FIBPO43427 364 aa22.38■■□□□ 1.17
PPP1R3F-202ENST00000376188 ZFYP08048 801 aaPredicted RBP22.38■■□□□ 1.17
PPP1R3F-202ENST00000376188 GPTP24298 496 aa22.38■■□□□ 1.17
PPP1R3F-202ENST00000376188 Q6ZUG5 572 aa22.38■■□□□ 1.17
PPP1R3F-202ENST00000376188 CCDC85AQ96PX6 553 aaPredicted RBP22.37■■□□□ 1.17
PPP1R3F-202ENST00000376188 HSPD1P10809 573 aaKnown RBP22.37■■□□□ 1.17
PPP1R3F-202ENST00000376188 CTSWP56202 376 aa22.37■■□□□ 1.17
PPP1R3F-202ENST00000376188 DNM1Q05193 864 aaKnown RBP22.37■■□□□ 1.17
PPP1R3F-202ENST00000376188 CCDC183Q5T5S1 534 aa22.37■■□□□ 1.17
PPP1R3F-202ENST00000376188 TTLL11Q8NHH1 800 aa22.37■■□□□ 1.17
PPP1R3F-202ENST00000376188 TSPY26PQ9H489 355 aa22.37■■□□□ 1.17
PPP1R3F-202ENST00000376188 NRAPQ86VF7 1730 aa22.36■■□□□ 1.17
PPP1R3F-202ENST00000376188 ADORA1P30542 326 aa22.36■■□□□ 1.17
PPP1R3F-202ENST00000376188 FKBP4Q02790 459 aaKnown RBP eCLIP22.36■■□□□ 1.17
PPP1R3F-202ENST00000376188 KLHL34Q8N239 644 aa22.36■■□□□ 1.17
PPP1R3F-202ENST00000376188 ANKRD18BA2A2Z9 1011 aa22.36■■□□□ 1.17
PPP1R3F-202ENST00000376188 ESPNB1AK53 854 aa22.36■■□□□ 1.17
PPP1R3F-202ENST00000376188 LETM1O95202 739 aaPredicted RBP22.36■■□□□ 1.17
PPP1R3F-202ENST00000376188 ITGA6P23229 1130 aa22.36■■□□□ 1.17
PPP1R3F-202ENST00000376188 DHX32Q7L7V1 743 aaKnown RBP22.36■■□□□ 1.17
PPP1R3F-202ENST00000376188 CLCN1P35523 988 aa22.35■■□□□ 1.17
PPP1R3F-202ENST00000376188 STK3Q13188 491 aa22.35■■□□□ 1.17
PPP1R3F-202ENST00000376188 STOX1Q6ZVD7 989 aa22.35■■□□□ 1.17
PPP1R3F-202ENST00000376188 RIPOR2Q9Y4F9 1068 aa22.35■■□□□ 1.17
PPP1R3F-202ENST00000376188 AKAP11Q9UKA4 1901 aa22.35■■□□□ 1.17
PPP1R3F-202ENST00000376188 IRS4O14654 1257 aaPredicted RBP22.35■■□□□ 1.17
PPP1R3F-202ENST00000376188 HSP90B1P14625 803 aaKnown RBP22.35■■□□□ 1.17
PPP1R3F-202ENST00000376188 ATP2B3Q16720 1220 aa22.35■■□□□ 1.17
PPP1R3F-202ENST00000376188 METTL24Q5JXM2 366 aa22.35■■□□□ 1.17
PPP1R3F-202ENST00000376188 CDC37L1Q7L3B6 337 aa22.35■■□□□ 1.17
PPP1R3F-202ENST00000376188 THRAP3Q9Y2W1 955 aaKnown RBP22.35■■□□□ 1.17
PPP1R3F-202ENST00000376188 KRT85P78386 507 aa22.34■■□□□ 1.17
PPP1R3F-202ENST00000376188 FGD1P98174 961 aa22.34■■□□□ 1.17
PPP1R3F-202ENST00000376188 SLFNL1Q499Z3 407 aa22.34■■□□□ 1.17
PPP1R3F-202ENST00000376188 LDHAL6AQ6ZMR3 332 aa22.34■■□□□ 1.17
PPP1R3F-202ENST00000376188 DZIP3Q86Y13 1208 aaKnown RBP22.34■■□□□ 1.17
PPP1R3F-202ENST00000376188 GREM2Q9H772 168 aa22.34■■□□□ 1.17
PPP1R3F-202ENST00000376188 TRMT112Q9UI30 125 aaKnown RBP22.34■■□□□ 1.17
PPP1R3F-202ENST00000376188 PDE8AO60658 829 aa22.33■■□□□ 1.17
PPP1R3F-202ENST00000376188 SYNE4Q8N205 404 aa22.33■■□□□ 1.17
PPP1R3F-202ENST00000376188 PDLIM2Q96JY6 352 aa22.33■■□□□ 1.17
PPP1R3F-202ENST00000376188 M0R2C6 588 aa22.32■■□□□ 1.16
PPP1R3F-202ENST00000376188 DTNBO60941 627 aa22.32■■□□□ 1.16
PPP1R3F-202ENST00000376188 BRF1Q92994 677 aa22.32■■□□□ 1.16
PPP1R3F-202ENST00000376188 LLPHQ9BRT6 129 aaKnown RBP22.32■■□□□ 1.16
PPP1R3F-202ENST00000376188 AGXT2Q9BYV1 514 aa22.32■■□□□ 1.16
PPP1R3F-202ENST00000376188 CNNM1Q9NRU3 951 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms