RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 SETD1AO15047 1707 aaKnown RBP13.83□□□□□ -0.2
MCF2L-202ENST00000375597 GOLGB1Q14789 3259 aaKnown RBP13.83□□□□□ -0.2
MCF2L-202ENST00000375597 AIFM3Q96NN9 605 aa13.83□□□□□ -0.2
MCF2L-202ENST00000375597 MYL10Q9BUA6 226 aa13.83□□□□□ -0.2
MCF2L-202ENST00000375597 EPC1Q9H2F5 836 aa13.83□□□□□ -0.2
MCF2L-202ENST00000375597 GOLPH3LQ9H4A5 285 aa13.82□□□□□ -0.2
MCF2L-202ENST00000375597 PRDM4Q9UKN5 801 aa13.82□□□□□ -0.2
MCF2L-202ENST00000375597 IGKV5-2P06315 115 aa13.82□□□□□ -0.2
MCF2L-202ENST00000375597 MAP4K1Q92918 833 aa13.82□□□□□ -0.2
MCF2L-202ENST00000375597 KAZALD1Q96I82 304 aa13.82□□□□□ -0.2
MCF2L-202ENST00000375597 ARHGEF10O15013 1369 aa13.82□□□□□ -0.2
MCF2L-202ENST00000375597 REREQ9P2R6 1566 aa13.82□□□□□ -0.2
MCF2L-202ENST00000375597 SYT10Q6XYQ8 523 aa13.81□□□□□ -0.2
MCF2L-202ENST00000375597 MTERF4Q7Z6M4 381 aaKnown RBP13.81□□□□□ -0.2
MCF2L-202ENST00000375597 IFNKQ9P0W0 207 aa13.81□□□□□ -0.2
MCF2L-202ENST00000375597 TMEM2Q9UHN6 1383 aa13.81□□□□□ -0.2
MCF2L-202ENST00000375597 TAF5LO75529 589 aa13.81□□□□□ -0.2
MCF2L-202ENST00000375597 NCBP1Q09161 790 aaKnown RBP13.81□□□□□ -0.2
MCF2L-202ENST00000375597 TTC41PQ6P2S7 1318 aa13.81□□□□□ -0.2
MCF2L-202ENST00000375597 NPHP3Q7Z494 1330 aa13.81□□□□□ -0.2
MCF2L-202ENST00000375597 ANKRD13DQ6ZTN6 518 aa13.81□□□□□ -0.2
MCF2L-202ENST00000375597 GCP02774 474 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 GPTP24298 496 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 LINS1Q8NG48 757 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 CLSTN2Q9H4D0 955 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 AGLP35573 1532 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 ZSCAN20P17040 1043 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-202ENST00000375597 STOX1Q6ZVD7 989 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 DENND2AQ9ULE3 1009 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 GOLGA8BA8MQT2 603 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 VGLL3A8MV65 326 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 COBLO75128 1261 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 LRRC24Q50LG9 513 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 FUCA2Q9BTY2 467 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 PUS3Q9BZE2 481 aaKnown RBP13.8□□□□□ -0.2
MCF2L-202ENST00000375597 INCENPQ9NQS7 918 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 DDX19AQ9NUU7 478 aaKnown RBP13.8□□□□□ -0.2
MCF2L-202ENST00000375597 MTMR7Q9Y216 660 aa13.8□□□□□ -0.2
MCF2L-202ENST00000375597 SLC4A8Q2Y0W8 1093 aa13.79□□□□□ -0.2
MCF2L-202ENST00000375597 MICU3Q86XE3 530 aa13.79□□□□□ -0.2
MCF2L-202ENST00000375597 CMTR1Q8N1G2 835 aaKnown RBP13.79□□□□□ -0.2
MCF2L-202ENST00000375597 HTATSF1O43719 755 aaKnown RBP13.79□□□□□ -0.2
MCF2L-202ENST00000375597 ANKRD1Q15327 319 aa13.79□□□□□ -0.2
MCF2L-202ENST00000375597 TNNI3KQ59H18 835 aa13.79□□□□□ -0.2
MCF2L-202ENST00000375597 SYNE3Q6ZMZ3 975 aa13.79□□□□□ -0.2
MCF2L-202ENST00000375597 FPGT-TNNI3KV9GXZ4 949 aa13.79□□□□□ -0.2
MCF2L-202ENST00000375597 SERPINC1P01008 464 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 IFIT1P09914 478 aaKnown RBP13.78□□□□□ -0.2
MCF2L-202ENST00000375597 ERCC6LQ2NKX8 1250 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 DPCR1Q3MIW9 517 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 NFXL1Q6ZNB6 911 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 LRRN4CLQ8ND94 238 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 CPLX3Q8WVH0 158 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 TTC21AQ8NDW8 1320 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 KIF13AQ9H1H9 1805 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 A1BGP04217 495 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 TERF1P54274 439 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 HELBQ8NG08 1087 aaPredicted RBP13.78□□□□□ -0.2
MCF2L-202ENST00000375597 PODXL2Q9NZ53 605 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 CLIC4Q9Y696 253 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 UBE2Q2LH0YL09 131 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 IDH1O75874 414 aaKnown RBP13.78□□□□□ -0.2
MCF2L-202ENST00000375597 CFAP100Q494V2 611 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 AKAP4Q5JQC9 854 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 SMAP1Q8IYB5 467 aaPredicted RBP13.78□□□□□ -0.2
MCF2L-202ENST00000375597 CEP57L1Q8IYX8 460 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 IP6K1Q92551 441 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 PHKBQ93100 1093 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 CFAP45Q9UL16 551 aa13.78□□□□□ -0.2
MCF2L-202ENST00000375597 KLF18A0A0U1RQI7 1052 aa13.77□□□□□ -0.2
MCF2L-202ENST00000375597 NEURL1BA8MQ27 555 aa13.77□□□□□ -0.2
MCF2L-202ENST00000375597 URI1O94763 535 aaPredicted RBP13.77□□□□□ -0.2
MCF2L-202ENST00000375597 GCKRQ14397 625 aa13.77□□□□□ -0.2
MCF2L-202ENST00000375597 STRN4Q9NRL3 753 aa13.77□□□□□ -0.2
MCF2L-202ENST00000375597 DNAI1Q9UI46 699 aa13.77□□□□□ -0.2
MCF2L-202ENST00000375597 OVOS2A0A0J9YW53 1432 aa13.77□□□□□ -0.2
MCF2L-202ENST00000375597 OVOS2Q6IE36 1432 aa13.77□□□□□ -0.2
MCF2L-202ENST00000375597 KLHL10Q6JEL2 608 aa13.77□□□□□ -0.21
MCF2L-202ENST00000375597 TTLL7Q6ZT98 887 aa13.77□□□□□ -0.21
MCF2L-202ENST00000375597 RALYLQ86SE5 291 aaKnown RBP13.77□□□□□ -0.21
MCF2L-202ENST00000375597 GPIHBP1Q8IV16 184 aa13.77□□□□□ -0.21
MCF2L-202ENST00000375597 IQSEC3Q9UPP2 1182 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-202ENST00000375597 SNAP23O00161 211 aa13.77□□□□□ -0.21
MCF2L-202ENST00000375597 ATP1A3P13637 1013 aa13.77□□□□□ -0.21
MCF2L-202ENST00000375597 NDUFA8P51970 172 aa13.77□□□□□ -0.21
MCF2L-202ENST00000375597 MCMDC2Q4G0Z9 681 aa13.77□□□□□ -0.21
MCF2L-202ENST00000375597 ZNF790Q6PG37 636 aa13.77□□□□□ -0.21
MCF2L-202ENST00000375597 SYNE4Q8N205 404 aa13.77□□□□□ -0.21
MCF2L-202ENST00000375597 TMEM87AQ8NBN3 555 aa13.77□□□□□ -0.21
MCF2L-202ENST00000375597 C8orf76Q96K31 380 aa13.77□□□□□ -0.21
MCF2L-202ENST00000375597 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-202ENST00000375597 ORC3Q9UBD5 711 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-202ENST00000375597 MON2Q7Z3U7 1717 aa13.76□□□□□ -0.21
MCF2L-202ENST00000375597 SSH2Q76I76 1423 aa13.76□□□□□ -0.21
MCF2L-202ENST00000375597 CABP4P57796 275 aa13.76□□□□□ -0.21
MCF2L-202ENST00000375597 ZNF827Q17R98 1081 aa13.76□□□□□ -0.21
MCF2L-202ENST00000375597 ZKSCAN3Q9BRR0 538 aa13.76□□□□□ -0.21
MCF2L-202ENST00000375597 HIP1O00291 1037 aa13.76□□□□□ -0.21
MCF2L-202ENST00000375597 XPO4Q9C0E2 1151 aaKnown RBP13.76□□□□□ -0.21
MCF2L-202ENST00000375597 hCG_1642624A0A1W2PR95 340 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms