RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 DCAF8Q5TAQ9 597 aa12.44□□□□□ -0.42
HLA-DOA-202ENST00000374813 ARMC5Q96C12 935 aa12.44□□□□□ -0.42
HLA-DOA-202ENST00000374813 ERO1AQ96HE7 468 aa12.44□□□□□ -0.42
HLA-DOA-202ENST00000374813 ZC3H12CQ9C0D7 883 aaKnown RBP12.44□□□□□ -0.42
HLA-DOA-202ENST00000374813 RSPH6AQ9H0K4 717 aa12.44□□□□□ -0.42
HLA-DOA-202ENST00000374813 PTPN22Q9Y2R2 807 aa12.44□□□□□ -0.42
HLA-DOA-202ENST00000374813 RTL9Q8NET4 1388 aa12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 ASTN2O75129 1339 aaPredicted RBP12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 ERBB4Q15303 1308 aa12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 HSPA5P11021 654 aaKnown RBP12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 DOK7Q18PE1 504 aa12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 HSP90AB3PQ58FF7 597 aa12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 CC2D1BQ5T0F9 858 aaKnown RBP12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 MOB2Q70IA6 237 aa12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 NBPF11Q86T75 865 aa12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 OTUD5Q96G74 571 aa12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 R3HDMLQ9H3Y0 253 aa12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 MIS18AQ9NYP9 233 aa12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 POLLQ9UGP5 575 aa12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 TRMT112Q9UI30 125 aaKnown RBP12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 NUDCQ9Y266 331 aa12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
HLA-DOA-202ENST00000374813 SH3TC1Q8TE82 1336 aa12.42□□□□□ -0.42
HLA-DOA-202ENST00000374813 USP17L8P0C7I0 530 aa12.42□□□□□ -0.42
HLA-DOA-202ENST00000374813 MKRN3Q13064 507 aaKnown RBP12.42□□□□□ -0.42
HLA-DOA-202ENST00000374813 DCTN1Q14203 1278 aa12.42□□□□□ -0.42
HLA-DOA-202ENST00000374813 ARMC9Q7Z3E5 817 aa12.42□□□□□ -0.42
HLA-DOA-202ENST00000374813 MYOZ2Q9NPC6 264 aa12.42□□□□□ -0.42
HLA-DOA-202ENST00000374813 MANSC4A6NHS7 340 aaPredicted RBP12.41□□□□□ -0.42
HLA-DOA-202ENST00000374813 H0YGN5 161 aa12.41□□□□□ -0.42
HLA-DOA-202ENST00000374813 EIF4A1P60842 406 aaKnown RBP12.41□□□□□ -0.42
HLA-DOA-202ENST00000374813 ARHGEF6Q15052 776 aa12.41□□□□□ -0.42
HLA-DOA-202ENST00000374813 RSBN1LQ6PCB5 846 aaPredicted RBP12.41□□□□□ -0.42
HLA-DOA-202ENST00000374813 CFAP53Q96M91 514 aa12.41□□□□□ -0.42
HLA-DOA-202ENST00000374813 EFCC1Q9HA90 598 aa12.41□□□□□ -0.42
HLA-DOA-202ENST00000374813 DUOX1Q9NRD9 1551 aa12.41□□□□□ -0.42
HLA-DOA-202ENST00000374813 COL3A1P02461 1466 aaPredicted RBP12.4□□□□□ -0.42
HLA-DOA-202ENST00000374813 TAF1P21675 1872 aa12.4□□□□□ -0.42
HLA-DOA-202ENST00000374813 DDX60Q8IY21 1712 aaKnown RBP12.4□□□□□ -0.42
HLA-DOA-202ENST00000374813 LAMA3Q16787 3333 aa12.4□□□□□ -0.42
HLA-DOA-202ENST00000374813 PER1O15534 1290 aaPredicted RBP12.4□□□□□ -0.42
HLA-DOA-202ENST00000374813 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
HLA-DOA-202ENST00000374813 SPRYD7Q5W111 196 aa12.4□□□□□ -0.42
HLA-DOA-202ENST00000374813 OTUD7BQ6GQQ9 843 aa12.4□□□□□ -0.42
HLA-DOA-202ENST00000374813 NLRP10Q86W26 655 aa12.4□□□□□ -0.42
HLA-DOA-202ENST00000374813 IFNL1Q8IU54 200 aa12.4□□□□□ -0.42
HLA-DOA-202ENST00000374813 TBC1D16Q8TBP0 767 aa12.4□□□□□ -0.42
HLA-DOA-202ENST00000374813 LAMB2P55268 1798 aa12.4□□□□□ -0.42
HLA-DOA-202ENST00000374813 ZNF609O15014 1411 aa12.39□□□□□ -0.43
HLA-DOA-202ENST00000374813 GPSM2P81274 684 aa12.39□□□□□ -0.43
HLA-DOA-202ENST00000374813 PTPN12Q05209 780 aaKnown RBP12.39□□□□□ -0.43
HLA-DOA-202ENST00000374813 CHRDL2Q6WN34 429 aa12.39□□□□□ -0.43
HLA-DOA-202ENST00000374813 LRRC37AA6NMS7 1700 aa12.39□□□□□ -0.43
HLA-DOA-202ENST00000374813 U2AF1L5P0DN76 240 aaPredicted RBP12.38□□□□□ -0.43
HLA-DOA-202ENST00000374813 MMP14P50281 582 aa12.38□□□□□ -0.43
HLA-DOA-202ENST00000374813 U2AF1Q01081 240 aaKnown RBP eCLIP12.38□□□□□ -0.43
HLA-DOA-202ENST00000374813 SF3B3Q15393 1217 aaKnown RBP12.38□□□□□ -0.43
HLA-DOA-202ENST00000374813 SLC4A8Q2Y0W8 1093 aa12.38□□□□□ -0.43
HLA-DOA-202ENST00000374813 PRAMEF18Q5VWM3 479 aa12.38□□□□□ -0.43
HLA-DOA-202ENST00000374813 OGFOD1Q8N543 542 aa12.38□□□□□ -0.43
HLA-DOA-202ENST00000374813 SLC10A4Q96EP9 437 aa12.38□□□□□ -0.43
HLA-DOA-202ENST00000374813 ZNF333Q96JL9 665 aa12.38□□□□□ -0.43
HLA-DOA-202ENST00000374813 GMLQ99445 158 aa12.38□□□□□ -0.43
HLA-DOA-202ENST00000374813 PODXL2Q9NZ53 605 aa12.38□□□□□ -0.43
HLA-DOA-202ENST00000374813 UNC80Q8N2C7 3258 aa12.38□□□□□ -0.43
HLA-DOA-202ENST00000374813 SCN9AQ15858 1988 aa12.38□□□□□ -0.43
HLA-DOA-202ENST00000374813 NEFMP07197 916 aa12.37□□□□□ -0.43
HLA-DOA-202ENST00000374813 ZBTB48P10074 688 aaPredicted RBP12.37□□□□□ -0.43
HLA-DOA-202ENST00000374813 RPS8P62241 208 aaKnown RBP12.37□□□□□ -0.43
HLA-DOA-202ENST00000374813 SP3Q02447 781 aa12.37□□□□□ -0.43
HLA-DOA-202ENST00000374813 SLC9C1Q4G0N8 1177 aa12.37□□□□□ -0.43
HLA-DOA-202ENST00000374813 LDLRAD1Q5T700 205 aa12.37□□□□□ -0.43
HLA-DOA-202ENST00000374813 CELF1Q92879 486 aaKnown RBP12.37□□□□□ -0.43
HLA-DOA-202ENST00000374813 ANKIB1Q9P2G1 1089 aa12.37□□□□□ -0.43
HLA-DOA-202ENST00000374813 RBM27Q9P2N5 1060 aaKnown RBP12.37□□□□□ -0.43
HLA-DOA-202ENST00000374813 USP17L3A6NCW0 530 aa12.36□□□□□ -0.43
HLA-DOA-202ENST00000374813 USP17L4A6NCW7 530 aa12.36□□□□□ -0.43
HLA-DOA-202ENST00000374813 UNCXA6NJT0 531 aa12.36□□□□□ -0.43
HLA-DOA-202ENST00000374813 NBPF9Q3BBW0 867 aa12.36□□□□□ -0.43
HLA-DOA-202ENST00000374813 USP17L1Q7RTZ2 530 aa12.36□□□□□ -0.43
HLA-DOA-202ENST00000374813 PODNQ7Z5L7 613 aa12.36□□□□□ -0.43
HLA-DOA-202ENST00000374813 CD99L2Q8TCZ2 262 aa12.36□□□□□ -0.43
HLA-DOA-202ENST00000374813 SCAF8Q9UPN6 1271 aaKnown RBP12.36□□□□□ -0.43
HLA-DOA-202ENST00000374813 PDIA6Q15084 440 aa12.35□□□□□ -0.43
HLA-DOA-202ENST00000374813 LRP10Q7Z4F1 713 aa12.35□□□□□ -0.43
HLA-DOA-202ENST00000374813 DPF3Q92784 378 aa12.35□□□□□ -0.43
HLA-DOA-202ENST00000374813 THUMPD2Q9BTF0 503 aaKnown RBP12.35□□□□□ -0.43
HLA-DOA-202ENST00000374813 GGA1Q9UJY5 639 aa12.35□□□□□ -0.43
HLA-DOA-202ENST00000374813 WNT10BO00744 389 aa12.34□□□□□ -0.43
HLA-DOA-202ENST00000374813 UFL1O94874 794 aa12.34□□□□□ -0.43
HLA-DOA-202ENST00000374813 EIF2S2P20042 333 aaKnown RBP12.34□□□□□ -0.43
HLA-DOA-202ENST00000374813 PRKG1Q13976 671 aa12.34□□□□□ -0.43
HLA-DOA-202ENST00000374813 COPS6Q7L5N1 327 aa12.34□□□□□ -0.43
HLA-DOA-202ENST00000374813 ANGEL1Q9UNK9 670 aaKnown RBP12.34□□□□□ -0.43
HLA-DOA-202ENST00000374813 IGF2BP3O00425 579 aaKnown RBP eCLIP12.33□□□□□ -0.44
HLA-DOA-202ENST00000374813 PPP1R12BO60237 982 aaPredicted RBP12.33□□□□□ -0.44
HLA-DOA-202ENST00000374813 HSP90B1P14625 803 aaKnown RBP12.33□□□□□ -0.44
HLA-DOA-202ENST00000374813 AIMP1Q12904 312 aaKnown RBP12.33□□□□□ -0.44
HLA-DOA-202ENST00000374813 CRHR2Q13324 411 aa12.33□□□□□ -0.44
HLA-DOA-202ENST00000374813 APOBEC3FQ8IUX4 373 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms