RNA–Protein interactions for RNA: ENST00000374720.7

SLC44A1-201, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC44A1, Length 10,511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-201ENST00000374720 HAUS7Q99871 368 aa13.16□□□□□ -0.3
SLC44A1-201ENST00000374720 PPP1R9BQ96SB3 815 aa13.16□□□□□ -0.3
SLC44A1-201ENST00000374720 IRX3P78415 501 aaPredicted RBP13.16□□□□□ -0.3
SLC44A1-201ENST00000374720 CCDC65Q8IXS2 484 aa13.16□□□□□ -0.3
SLC44A1-201ENST00000374720 ATP11AP98196 1134 aa13.16□□□□□ -0.3
SLC44A1-201ENST00000374720 JAKMIP2Q96AA8 810 aa13.16□□□□□ -0.3
SLC44A1-201ENST00000374720 UBLCP1Q8WVY7 318 aaPredicted RBP13.16□□□□□ -0.3
SLC44A1-201ENST00000374720 SYT1P21579 422 aa13.16□□□□□ -0.3
SLC44A1-201ENST00000374720 ASIC1P78348 528 aa13.16□□□□□ -0.3
SLC44A1-201ENST00000374720 ATP6V0A2Q9Y487 856 aa13.16□□□□□ -0.3
SLC44A1-201ENST00000374720 CALM1P0DP23 149 aa13.16□□□□□ -0.3
SLC44A1-201ENST00000374720 CALM2P0DP24 149 aa13.16□□□□□ -0.3
SLC44A1-201ENST00000374720 CALM3P0DP25 149 aa13.16□□□□□ -0.3
SLC44A1-201ENST00000374720 TSPY3P0CV98 308 aa13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 TSPY8P0CW00 308 aa13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 NKTRP30414 1462 aaKnown RBP13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 TAF7Q15545 349 aaPredicted RBP13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 UVSSAQ2YD98 709 aa13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 INTS8Q75QN2 995 aaKnown RBP13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 GBP7Q8N8V2 638 aaPredicted RBP13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 TAF12Q16514 161 aa13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 GBP6Q6ZN66 633 aa13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 RASA3Q14644 834 aa13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 VPS52Q8N1B4 723 aa13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 STX8Q9UNK0 236 aa13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 HSPA1LP34931 641 aa13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 AKNAD1Q5T1N1 836 aa13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 GPTP24298 496 aa13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 ZSCAN16Q9H4T2 348 aaPredicted RBP13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 IFIT1BQ5T764 474 aaKnown RBP13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 THEMISQ8N1K5 641 aaPredicted RBP13.15□□□□□ -0.3
SLC44A1-201ENST00000374720 F6X3S4 739 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 NCBP1Q09161 790 aaKnown RBP13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 TBC1D2Q9BYX2 928 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 RFC1P35251 1148 aaPredicted RBP13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 WTAPQ15007 396 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 FAM184BQ9ULE4 1060 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 TLDC2A0PJX2 215 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 KRT86O43790 486 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 PLS1Q14651 629 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 CCDC170Q8IYT3 715 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 NBPF7P0C2Y1 421 aaPredicted RBP13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 PROCA1Q8NCQ7 364 aaPredicted RBP13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 NEK1Q96PY6 1258 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 MTRF1LQ9UGC7 380 aaKnown RBP13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 CASQ2O14958 399 aaPredicted RBP13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 FLIIQ13045 1269 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 TCHPQ9BT92 498 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 PSMA7O14818 248 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 NBPF11Q86T75 865 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 MSANTD4Q8NCY6 345 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 CRNKL1Q9BZJ0 848 aaKnown RBP13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 RHOXF2BP0C7M4 288 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 UBXN1Q04323 297 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 PPFIBP2Q8ND30 876 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 RHOXF2Q9BQY4 288 aa13.14□□□□□ -0.31
SLC44A1-201ENST00000374720 USHBP1Q8N6Y0 703 aa13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 SIRT1Q96EB6 747 aa13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 GUCA1BQ9UMX6 200 aa13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 KRT83P78385 493 aa13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 NUF2Q9BZD4 464 aa13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 FAM114A2Q9NRY5 505 aa13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 NEK11Q8NG66 645 aa13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 VCX3BQ9H321 246 aa13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 SNRKQ9NRH2 765 aa13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 SUPT6HQ7KZ85 1726 aaKnown RBP13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 FAM76AQ8TAV0 307 aa13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 ERCC5P28715 1186 aaPredicted RBP13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 PDE1CQ14123 709 aaPredicted RBP13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 HMG20BQ9P0W2 317 aa13.13□□□□□ -0.31
SLC44A1-201ENST00000374720 ATP2B3Q16720 1220 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 CDC5LQ99459 802 aaKnown RBP13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 SWAP70Q9UH65 585 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 CNPY2Q9Y2B0 182 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 TBC1D9Q6ZT07 1266 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 KCNG4Q8TDN1 519 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 TACC3Q9Y6A5 838 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 TBC1D31Q96DN5 1066 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 PPANQ9NQ55 473 aaKnown RBP13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 NCOA2Q15596 1464 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 VIMP08670 466 aaKnown RBP13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 GSTO1P78417 241 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 SLFN5Q08AF3 891 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 GRM1Q13255 1194 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 CCDC117Q8IWD4 279 aaPredicted RBP13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 INF2Q27J81 1249 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 ERCC6LQ2NKX8 1250 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 PRPF31Q8WWY3 499 aaKnown RBP13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 GBP1P32455 592 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 PCK1P35558 622 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 ATAD2Q6PL18 1390 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 MARCKSP29966 332 aaPredicted RBP13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 GKAP1Q5VSY0 366 aaPredicted RBP13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 NKIRAS1Q9NYS0 192 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 MAP3K2Q9Y2U5 619 aa13.12□□□□□ -0.31
SLC44A1-201ENST00000374720 LDHCP07864 332 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 ALDH1L2Q3SY69 923 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms