RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 DNAJC10Q8IXB1 793 aa20.22■□□□□ 0.83
RXRB-201ENST00000374680 TMEM87AQ8NBN3 555 aa20.22■□□□□ 0.83
RXRB-201ENST00000374680 DACT1Q9NYF0 836 aa20.22■□□□□ 0.83
RXRB-201ENST00000374680 CCDC39Q9UFE4 941 aa20.22■□□□□ 0.83
RXRB-201ENST00000374680 ANKRD1Q15327 319 aa20.21■□□□□ 0.83
RXRB-201ENST00000374680 FBXW7Q969H0 707 aa20.21■□□□□ 0.83
RXRB-201ENST00000374680 N4BP2Q86UW6 1770 aaPredicted RBP20.21■□□□□ 0.83
RXRB-201ENST00000374680 IL2RBP14784 551 aa20.21■□□□□ 0.83
RXRB-201ENST00000374680 BICD2Q8TD16 824 aa20.21■□□□□ 0.83
RXRB-201ENST00000374680 CCDC57Q2TAC2 916 aa20.2■□□□□ 0.82
RXRB-201ENST00000374680 A0A087WWV3 80 aa20.2■□□□□ 0.82
RXRB-201ENST00000374680 SCRN1Q12765 414 aa20.2■□□□□ 0.82
RXRB-201ENST00000374680 CEP126Q9P2H0 1117 aa20.2■□□□□ 0.82
RXRB-201ENST00000374680 EYA2O00167 538 aa20.2■□□□□ 0.82
RXRB-201ENST00000374680 AP5Z1O43299 807 aa20.2■□□□□ 0.82
RXRB-201ENST00000374680 U3KPZ7 1027 aaPredicted RBP20.2■□□□□ 0.82
RXRB-201ENST00000374680 TNS3Q68CZ2 1445 aa20.19■□□□□ 0.82
RXRB-201ENST00000374680 TRPM3Q9HCF6 1732 aaPredicted RBP20.19■□□□□ 0.82
RXRB-201ENST00000374680 OFD1O75665 1012 aa20.19■□□□□ 0.82
RXRB-201ENST00000374680 HMG20BQ9P0W2 317 aa20.19■□□□□ 0.82
RXRB-201ENST00000374680 WDR17Q8IZU2 1322 aa20.19■□□□□ 0.82
RXRB-201ENST00000374680 PCDH11XQ9BZA7 1347 aa20.19■□□□□ 0.82
RXRB-201ENST00000374680 PCDH11YQ9BZA8 1340 aa20.19■□□□□ 0.82
RXRB-201ENST00000374680 PDCP20941 246 aa20.19■□□□□ 0.82
RXRB-201ENST00000374680 SCARF1Q14162 830 aa20.19■□□□□ 0.82
RXRB-201ENST00000374680 OTUD7BQ6GQQ9 843 aa20.18■□□□□ 0.82
RXRB-201ENST00000374680 TMOD3Q9NYL9 352 aa20.18■□□□□ 0.82
RXRB-201ENST00000374680 SLAIN2Q9P270 581 aa20.18■□□□□ 0.82
RXRB-201ENST00000374680 GTF3C6Q969F1 213 aa20.18■□□□□ 0.82
RXRB-201ENST00000374680 M0R2C6 588 aa20.17■□□□□ 0.82
RXRB-201ENST00000374680 HSPD1P10809 573 aaKnown RBP20.17■□□□□ 0.82
RXRB-201ENST00000374680 IL15P40933 162 aaPredicted RBP20.17■□□□□ 0.82
RXRB-201ENST00000374680 CSPP1Q1MSJ5 1256 aa20.17■□□□□ 0.82
RXRB-201ENST00000374680 LUZP1Q86V48 1076 aa20.17■□□□□ 0.82
RXRB-201ENST00000374680 TTC39AQ5SRH9 613 aa20.17■□□□□ 0.82
RXRB-201ENST00000374680 ERCC4Q92889 916 aaPredicted RBP20.17■□□□□ 0.82
RXRB-201ENST00000374680 OSBP2Q969R2 916 aa20.17■□□□□ 0.82
RXRB-201ENST00000374680 KRT32Q14532 448 aa20.16■□□□□ 0.82
RXRB-201ENST00000374680 LEO1Q8WVC0 666 aaPredicted RBP20.16■□□□□ 0.82
RXRB-201ENST00000374680 NUP62CLQ9H1M0 184 aa20.16■□□□□ 0.82
RXRB-201ENST00000374680 NR1I2O75469 434 aa20.16■□□□□ 0.82
RXRB-201ENST00000374680 HLFQ16534 295 aa20.16■□□□□ 0.82
RXRB-201ENST00000374680 USPL1Q5W0Q7 1092 aa20.16■□□□□ 0.82
RXRB-201ENST00000374680 TNMDQ9H2S6 317 aa20.16■□□□□ 0.82
RXRB-201ENST00000374680 ADAMTSL3P82987 1691 aa20.16■□□□□ 0.82
RXRB-201ENST00000374680 HELBQ8NG08 1087 aaPredicted RBP20.16■□□□□ 0.82
RXRB-201ENST00000374680 ZNF335Q9H4Z2 1342 aaPredicted RBP20.15■□□□□ 0.82
RXRB-201ENST00000374680 CCDC191Q8NCU4 936 aa20.15■□□□□ 0.82
RXRB-201ENST00000374680 XAGE2Q96GT9 111 aa20.15■□□□□ 0.82
RXRB-201ENST00000374680 PHRF1Q9P1Y6 1649 aaKnown RBP20.15■□□□□ 0.82
RXRB-201ENST00000374680 E7EWF7 191 aa20.15■□□□□ 0.82
RXRB-201ENST00000374680 SNAP23O00161 211 aa20.15■□□□□ 0.82
RXRB-201ENST00000374680 PGBD1Q96JS3 809 aa20.15■□□□□ 0.82
RXRB-201ENST00000374680 GJB4Q9NTQ9 266 aa20.15■□□□□ 0.82
RXRB-201ENST00000374680 MAST3O60307 1309 aa20.15■□□□□ 0.82
RXRB-201ENST00000374680 ZAP70P43403 619 aa20.14■□□□□ 0.82
RXRB-201ENST00000374680 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.14■□□□□ 0.82
RXRB-201ENST00000374680 PIGBQ92521 554 aa20.14■□□□□ 0.82
RXRB-201ENST00000374680 TBC1D2BQ9UPU7 963 aa20.14■□□□□ 0.82
RXRB-201ENST00000374680 ZNF142P52746 1687 aaPredicted RBP20.14■□□□□ 0.81
RXRB-201ENST00000374680 HS1BP3Q53T59 392 aa20.14■□□□□ 0.81
RXRB-201ENST00000374680 DHX32Q7L7V1 743 aaKnown RBP20.14■□□□□ 0.81
RXRB-201ENST00000374680 FAM13BQ9NYF5 915 aa20.14■□□□□ 0.81
RXRB-201ENST00000374680 ERVV-2B6SEH9 535 aa20.13■□□□□ 0.81
RXRB-201ENST00000374680 HSP90AA2PQ14568 343 aaPredicted RBP20.13■□□□□ 0.81
RXRB-201ENST00000374680 MAP3K11Q16584 847 aa20.13■□□□□ 0.81
RXRB-201ENST00000374680 STK11IPQ8N1F8 1099 aa20.13■□□□□ 0.81
RXRB-201ENST00000374680 SIPA1L3O60292 1781 aaPredicted RBP20.13■□□□□ 0.81
RXRB-201ENST00000374680 SCN11AQ9UI33 1791 aa20.13■□□□□ 0.81
RXRB-201ENST00000374680 RNF113AO15541 343 aaKnown RBP20.13■□□□□ 0.81
RXRB-201ENST00000374680 CCDC192P0DO97 292 aa20.13■□□□□ 0.81
RXRB-201ENST00000374680 PTPDC1A2A3K4 754 aa20.13■□□□□ 0.81
RXRB-201ENST00000374680 LETM1O95202 739 aaPredicted RBP20.13■□□□□ 0.81
RXRB-201ENST00000374680 CCDC158Q5M9N0 1113 aa20.13■□□□□ 0.81
RXRB-201ENST00000374680 TSC1Q92574 1164 aa20.13■□□□□ 0.81
RXRB-201ENST00000374680 BTG4Q9NY30 223 aa20.13■□□□□ 0.81
RXRB-201ENST00000374680 DENND2AQ9ULE3 1009 aa20.13■□□□□ 0.81
RXRB-201ENST00000374680 TCIRG1Q13488 830 aa20.12■□□□□ 0.81
RXRB-201ENST00000374680 ANO6Q4KMQ2 910 aa20.12■□□□□ 0.81
RXRB-201ENST00000374680 CAMTA1Q9Y6Y1 1673 aa20.12■□□□□ 0.81
RXRB-201ENST00000374680 TYRO3Q06418 890 aa20.12■□□□□ 0.81
RXRB-201ENST00000374680 TSGA10IPQ3SY00 556 aa20.12■□□□□ 0.81
RXRB-201ENST00000374680 ZMYM1Q5SVZ6 1142 aa20.12■□□□□ 0.81
RXRB-201ENST00000374680 FUCA2Q9BTY2 467 aa20.12■□□□□ 0.81
RXRB-201ENST00000374680 ZNF500O60304 480 aaPredicted RBP20.11■□□□□ 0.81
RXRB-201ENST00000374680 CTDNEP1O95476 244 aa20.11■□□□□ 0.81
RXRB-201ENST00000374680 IFIT5Q13325 482 aaKnown RBP20.11■□□□□ 0.81
RXRB-201ENST00000374680 METTL24Q5JXM2 366 aa20.11■□□□□ 0.81
RXRB-201ENST00000374680 LDHAL6AQ6ZMR3 332 aa20.11■□□□□ 0.81
RXRB-201ENST00000374680 PUS7LQ9H0K6 701 aaKnown RBP20.11■□□□□ 0.81
RXRB-201ENST00000374680 APPP05067 770 aa20.11■□□□□ 0.81
RXRB-201ENST00000374680 DRC7Q8IY82 874 aa20.11■□□□□ 0.81
RXRB-201ENST00000374680 BCL11BQ9C0K0 894 aaPredicted RBP20.11■□□□□ 0.81
RXRB-201ENST00000374680 SCAND2PQ9GZW5 306 aaPredicted RBP20.11■□□□□ 0.81
RXRB-201ENST00000374680 RXRAP19793 462 aa20.1■□□□□ 0.81
RXRB-201ENST00000374680 KIF6Q6ZMV9 814 aa20.1■□□□□ 0.81
RXRB-201ENST00000374680 GREM2Q9H772 168 aa20.1■□□□□ 0.81
RXRB-201ENST00000374680 KIAA2012Q0VF49 1180 aa20.1■□□□□ 0.81
RXRB-201ENST00000374680 NSUN7Q8NE18 718 aaKnown RBP20.1■□□□□ 0.81
RXRB-201ENST00000374680 DNAJC25Q9H1X3 360 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 248.3 ms