RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 TAF12Q16514 161 aa7.27□□□□□ -1.25
PTPN3-202ENST00000374541 CCT4P50991 539 aaKnown RBP7.26□□□□□ -1.25
PTPN3-202ENST00000374541 VPS36Q86VN1 386 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 TANGO6Q9C0B7 1094 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 PRDM5Q9NQX1 630 aaPredicted RBP7.26□□□□□ -1.25
PTPN3-202ENST00000374541 KDM4AO75164 1064 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 ADRA2BP18089 450 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 RBM10P98175 930 aaKnown RBP7.26□□□□□ -1.25
PTPN3-202ENST00000374541 MAP3K12Q12852 859 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 PNMA8AQ86V59 439 aaPredicted RBP7.26□□□□□ -1.25
PTPN3-202ENST00000374541 FHDC1Q9C0D6 1143 aaPredicted RBP7.26□□□□□ -1.25
PTPN3-202ENST00000374541 MINDY4BA8MYZ0 360 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 SPATA32Q96LK8 384 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 HINFPQ9BQA5 517 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 CENPHQ9H3R5 247 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 DBF4Q9UBU7 674 aaPredicted RBP7.26□□□□□ -1.25
PTPN3-202ENST00000374541 ITSN2Q9NZM3 1697 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 ADGRL3Q9HAR2 1447 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 ZCCHC11Q5TAX3 1644 aaKnown RBP7.26□□□□□ -1.25
PTPN3-202ENST00000374541 A0A0G2JLW4 131 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 GNAI2P04899 355 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 SFPQP23246 707 aaKnown RBP eCLIP7.26□□□□□ -1.25
PTPN3-202ENST00000374541 KIAA1328Q86T90 577 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 LUZP1Q86V48 1076 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 SPC24Q8NBT2 197 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 KIF18AQ8NI77 898 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 MAST3O60307 1309 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 SPECC1LQ69YQ0 1117 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 IQSEC3Q9UPP2 1182 aaPredicted RBP7.26□□□□□ -1.25
PTPN3-202ENST00000374541 ARHGEF12Q9NZN5 1544 aa7.26□□□□□ -1.25
PTPN3-202ENST00000374541 PPEF1O14829 653 aaPredicted RBP7.25□□□□□ -1.25
PTPN3-202ENST00000374541 KIF5CO60282 957 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 SPA17Q15506 151 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 MTIF3Q9H2K0 278 aaKnown RBP7.25□□□□□ -1.25
PTPN3-202ENST00000374541 PHAXQ9H814 394 aaKnown RBP7.25□□□□□ -1.25
PTPN3-202ENST00000374541 AS3MTQ9HBK9 375 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 RAD17O75943 681 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 KIF20AO95235 890 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 MAP3K11Q16584 847 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 C6orf163Q5TEZ5 329 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 JAG2Q9Y219 1238 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 NR2E3Q9Y5X4 410 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 MBD5Q9P267 1494 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 IRS4O14654 1257 aaPredicted RBP7.25□□□□□ -1.25
PTPN3-202ENST00000374541 OSBPP22059 807 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 NAA15Q9BXJ9 866 aaKnown RBP7.25□□□□□ -1.25
PTPN3-202ENST00000374541 PTPN14Q15678 1187 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 DOK7Q18PE1 504 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 CC2D2BQ6DHV5 1058 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 POTEAQ6S8J7 498 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 KRT26Q7Z3Y9 468 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 SH2D4AQ9H788 454 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 BRPF3Q9ULD4 1205 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 CCDC69A6NI79 296 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 NEBLO76041 1014 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 CELF2O95319 508 aaKnown RBP7.25□□□□□ -1.25
PTPN3-202ENST00000374541 HOXC9P31274 260 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 KCNH4Q9UQ05 1017 aa7.25□□□□□ -1.25
PTPN3-202ENST00000374541 IGSF1Q8N6C5 1336 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 CTAGE5O15320 804 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 FGFR1OPO95684 399 aaKnown RBP7.24□□□□□ -1.25
PTPN3-202ENST00000374541 CAVIN2O95810 425 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 EIF5P55010 431 aaKnown RBP7.24□□□□□ -1.25
PTPN3-202ENST00000374541 HUNKP57058 714 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 LARP1BQ659C4 914 aaKnown RBP7.24□□□□□ -1.25
PTPN3-202ENST00000374541 COA7Q96BR5 231 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 SEC63Q9UGP8 760 aaKnown RBP7.24□□□□□ -1.25
PTPN3-202ENST00000374541 SPATA31A3Q5VYP0 1347 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 CCDC175P0C221 793 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 ANKRD13DQ6ZTN6 518 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 CEP63Q96MT8 703 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 CKAP2LQ8IYA6 745 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 KDM5CP41229 1560 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 CSPG5O95196 566 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 GSDMDP57764 484 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 FKBP15Q5T1M5 1219 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 DPP9Q86TI2 863 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 CFAP57Q96MR6 1250 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 ANO10Q9NW15 660 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 KDM5DQ9BY66 1539 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 MCM4P33991 863 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 FAM193AP78312 1265 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 SREBF2Q12772 1141 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 DNAJC10Q8IXB1 793 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 UPF1Q92900 1129 aaKnown RBP eCLIP7.24□□□□□ -1.25
PTPN3-202ENST00000374541 UBAC1Q9BSL1 405 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 PTPN23Q9H3S7 1636 aa7.24□□□□□ -1.25
PTPN3-202ENST00000374541 CCNA1P78396 465 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 UIMC1Q96RL1 719 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 ANGEL1Q9UNK9 670 aaKnown RBP7.23□□□□□ -1.25
PTPN3-202ENST00000374541 PTPRTO14522 1441 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 USO1O60763 962 aaKnown RBP7.23□□□□□ -1.25
PTPN3-202ENST00000374541 TUBB4AP04350 444 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 BLOC1S2Q6QNY1 142 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 NUP133Q8WUM0 1156 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 SCAND2PQ9GZW5 306 aaPredicted RBP7.23□□□□□ -1.25
PTPN3-202ENST00000374541 ABCC1P33527 1531 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 DNMT1P26358 1616 aaKnown RBP7.23□□□□□ -1.25
PTPN3-202ENST00000374541 ZBBXA8MT70 800 aa7.23□□□□□ -1.25
PTPN3-202ENST00000374541 TFRCP02786 760 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms