RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 SOS2Q07890 1332 aaPredicted RBP21.18■□□□□ 0.98
PHF1-201ENST00000374512 ZMYND15Q9H091 742 aa21.18■□□□□ 0.98
PHF1-201ENST00000374512 KIF3AQ9Y496 699 aa21.18■□□□□ 0.98
PHF1-201ENST00000374512 TAF6LQ9Y6J9 622 aa21.18■□□□□ 0.98
PHF1-201ENST00000374512 PLBD2Q8NHP8 589 aa21.17■□□□□ 0.98
PHF1-201ENST00000374512 TCEANC2Q96MN5 208 aa21.17■□□□□ 0.98
PHF1-201ENST00000374512 PRDM11Q9NQV5 511 aa21.17■□□□□ 0.98
PHF1-201ENST00000374512 WDR17Q8IZU2 1322 aa21.17■□□□□ 0.98
PHF1-201ENST00000374512 RESTQ13127 1097 aa21.17■□□□□ 0.98
PHF1-201ENST00000374512 COL9A3Q14050 684 aaPredicted RBP21.17■□□□□ 0.98
PHF1-201ENST00000374512 FAM173BQ6P4H8 233 aa21.17■□□□□ 0.98
PHF1-201ENST00000374512 TDRD7Q8NHU6 1098 aaKnown RBP21.17■□□□□ 0.98
PHF1-201ENST00000374512 CHMP4CQ96CF2 233 aa21.17■□□□□ 0.98
PHF1-201ENST00000374512 SLAIN2Q9P270 581 aa21.17■□□□□ 0.98
PHF1-201ENST00000374512 A0A087WZG4 1122 aa21.16■□□□□ 0.98
PHF1-201ENST00000374512 TFCP2Q12800 502 aa21.16■□□□□ 0.98
PHF1-201ENST00000374512 CAMK4Q16566 473 aa21.16■□□□□ 0.98
PHF1-201ENST00000374512 CBX8Q9HC52 389 aa21.16■□□□□ 0.98
PHF1-201ENST00000374512 GLI3P10071 1580 aa21.16■□□□□ 0.98
PHF1-201ENST00000374512 SH3TC1Q8TE82 1336 aa21.16■□□□□ 0.98
PHF1-201ENST00000374512 ANO6Q4KMQ2 910 aa21.16■□□□□ 0.98
PHF1-201ENST00000374512 ATL3Q6DD88 541 aa21.16■□□□□ 0.98
PHF1-201ENST00000374512 SMARCC2Q8TAQ2 1214 aa21.16■□□□□ 0.98
PHF1-201ENST00000374512 JARID2Q92833 1246 aaPredicted RBP21.16■□□□□ 0.98
PHF1-201ENST00000374512 TFIP11Q9UBB9 837 aaKnown RBP21.16■□□□□ 0.98
PHF1-201ENST00000374512 H3BQV1 296 aa21.15■□□□□ 0.98
PHF1-201ENST00000374512 STK3Q13188 491 aa21.15■□□□□ 0.98
PHF1-201ENST00000374512 IFFO2Q5TF58 517 aa21.15■□□□□ 0.98
PHF1-201ENST00000374512 Q6ZUG5 572 aa21.15■□□□□ 0.98
PHF1-201ENST00000374512 ZNF609O15014 1411 aa21.15■□□□□ 0.98
PHF1-201ENST00000374512 ATP5J2-PTCD1G3V325 749 aa21.14■□□□□ 0.98
PHF1-201ENST00000374512 CTAGE5O15320 804 aa21.14■□□□□ 0.98
PHF1-201ENST00000374512 DTNBO60941 627 aa21.14■□□□□ 0.98
PHF1-201ENST00000374512 PTCD1O75127 700 aaKnown RBP21.14■□□□□ 0.98
PHF1-201ENST00000374512 NAA16Q6N069 864 aaPredicted RBP21.14■□□□□ 0.98
PHF1-201ENST00000374512 BRF1Q92994 677 aa21.14■□□□□ 0.98
PHF1-201ENST00000374512 KDM4FA0A1W2PPD8 638 aa21.14■□□□□ 0.97
PHF1-201ENST00000374512 LUZP1Q86V48 1076 aa21.14■□□□□ 0.97
PHF1-201ENST00000374512 PLA2G4DQ86XP0 818 aa21.14■□□□□ 0.97
PHF1-201ENST00000374512 KBTBD3Q8NAB2 608 aa21.14■□□□□ 0.97
PHF1-201ENST00000374512 SPC24Q8NBT2 197 aa21.14■□□□□ 0.97
PHF1-201ENST00000374512 BICD2Q8TD16 824 aa21.14■□□□□ 0.97
PHF1-201ENST00000374512 PYCARDQ9ULZ3 195 aa21.14■□□□□ 0.97
PHF1-201ENST00000374512 CHMP3Q9Y3E7 222 aa21.14■□□□□ 0.97
PHF1-201ENST00000374512 PFKFB2O60825 505 aa21.13■□□□□ 0.97
PHF1-201ENST00000374512 CYP21A2P08686 494 aa21.13■□□□□ 0.97
PHF1-201ENST00000374512 CKAP2LQ8IYA6 745 aa21.13■□□□□ 0.97
PHF1-201ENST00000374512 C17orf53Q8N3J3 647 aaPredicted RBP21.13■□□□□ 0.97
PHF1-201ENST00000374512 PGBD1Q96JS3 809 aa21.13■□□□□ 0.97
PHF1-201ENST00000374512 CCDC94Q9BW85 323 aaPredicted RBP21.13■□□□□ 0.97
PHF1-201ENST00000374512 HELLSQ9NRZ9 838 aa21.13■□□□□ 0.97
PHF1-201ENST00000374512 PALLDQ8WX93 1383 aa21.13■□□□□ 0.97
PHF1-201ENST00000374512 PCDH11XQ9BZA7 1347 aa21.13■□□□□ 0.97
PHF1-201ENST00000374512 PCDH11YQ9BZA8 1340 aa21.13■□□□□ 0.97
PHF1-201ENST00000374512 CASP7P55210 303 aa21.13■□□□□ 0.97
PHF1-201ENST00000374512 TOM1L2Q6ZVM7 507 aa21.13■□□□□ 0.97
PHF1-201ENST00000374512 EDC3Q96F86 508 aaKnown RBP21.13■□□□□ 0.97
PHF1-201ENST00000374512 GPR108Q9NPR9 543 aa21.13■□□□□ 0.97
PHF1-201ENST00000374512 NR1I2O75469 434 aa21.12■□□□□ 0.97
PHF1-201ENST00000374512 HSP90B1P14625 803 aaKnown RBP21.12■□□□□ 0.97
PHF1-201ENST00000374512 CDC25BP30305 580 aa21.12■□□□□ 0.97
PHF1-201ENST00000374512 DSCC1Q9BVC3 393 aa21.12■□□□□ 0.97
PHF1-201ENST00000374512 COL5A2P05997 1499 aaPredicted RBP21.12■□□□□ 0.97
PHF1-201ENST00000374512 JAK2O60674 1132 aa21.12■□□□□ 0.97
PHF1-201ENST00000374512 ZNF165P49910 485 aa21.12■□□□□ 0.97
PHF1-201ENST00000374512 ZNF75DP51815 510 aa21.12■□□□□ 0.97
PHF1-201ENST00000374512 DHX32Q7L7V1 743 aaKnown RBP21.12■□□□□ 0.97
PHF1-201ENST00000374512 ZCRB1Q8TBF4 217 aaKnown RBP21.12■□□□□ 0.97
PHF1-201ENST00000374512 ABCA3Q99758 1704 aa21.11■□□□□ 0.97
PHF1-201ENST00000374512 ZNF335Q9H4Z2 1342 aaPredicted RBP21.11■□□□□ 0.97
PHF1-201ENST00000374512 AGXT2Q9BYV1 514 aa21.11■□□□□ 0.97
PHF1-201ENST00000374512 DBNDD2Q9BQY9 259 aa21.1■□□□□ 0.97
PHF1-201ENST00000374512 RCOR1Q9UKL0 485 aa21.1■□□□□ 0.97
PHF1-201ENST00000374512 LMBR1LQ6UX01 489 aa21.1■□□□□ 0.97
PHF1-201ENST00000374512 DNAJC2Q99543 621 aaKnown RBP21.1■□□□□ 0.97
PHF1-201ENST00000374512 TRIM5Q9C035 493 aa21.1■□□□□ 0.97
PHF1-201ENST00000374512 MYH15Q9Y2K3 1946 aa21.1■□□□□ 0.97
PHF1-201ENST00000374512 H7C1W4 665 aa21.09■□□□□ 0.97
PHF1-201ENST00000374512 PTGS1P23219 599 aa21.09■□□□□ 0.97
PHF1-201ENST00000374512 FGD1P98174 961 aa21.09■□□□□ 0.97
PHF1-201ENST00000374512 SCRN1Q12765 414 aa21.09■□□□□ 0.97
PHF1-201ENST00000374512 UBR2Q8IWV8 1755 aa21.09■□□□□ 0.97
PHF1-201ENST00000374512 NBPF26B4DH59 902 aa21.09■□□□□ 0.97
PHF1-201ENST00000374512 NBPF14Q5TI25 921 aa21.09■□□□□ 0.97
PHF1-201ENST00000374512 NBPF10Q6P3W6 841 aaKnown RBP21.09■□□□□ 0.97
PHF1-201ENST00000374512 SARM1Q6SZW1 724 aa21.09■□□□□ 0.97
PHF1-201ENST00000374512 NBPF15Q8N660 670 aa21.09■□□□□ 0.97
PHF1-201ENST00000374512 ERVV-2B6SEH9 535 aa21.08■□□□□ 0.97
PHF1-201ENST00000374512 CCDC186Q7Z3E2 898 aa21.08■□□□□ 0.97
PHF1-201ENST00000374512 DRC7Q8IY82 874 aa21.08■□□□□ 0.97
PHF1-201ENST00000374512 SMAP1Q8IYB5 467 aaPredicted RBP21.08■□□□□ 0.97
PHF1-201ENST00000374512 ZNF710Q8N1W2 664 aa21.08■□□□□ 0.97
PHF1-201ENST00000374512 CARD10Q9BWT7 1032 aa21.08■□□□□ 0.97
PHF1-201ENST00000374512 NUP188Q5SRE5 1749 aa21.08■□□□□ 0.97
PHF1-201ENST00000374512 FOXO4P98177 505 aa21.08■□□□□ 0.96
PHF1-201ENST00000374512 NSUN7Q8NE18 718 aaKnown RBP21.08■□□□□ 0.96
PHF1-201ENST00000374512 ZNF396Q96N95 335 aaPredicted RBP21.08■□□□□ 0.96
PHF1-201ENST00000374512 SPEF2Q9C093 1822 aa21.07■□□□□ 0.96
PHF1-201ENST00000374512 ADD1P35611 737 aaKnown RBP21.07■□□□□ 0.96
PHF1-201ENST00000374512 EXOSC10Q01780 885 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms