RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 IFIT3O14879 490 aaKnown RBP15.9■□□□□ 0.14
CLIC4-201ENST00000374379 HMGB1P09429 215 aaKnown RBP15.9■□□□□ 0.14
CLIC4-201ENST00000374379 SLC5A1P13866 664 aa15.9■□□□□ 0.14
CLIC4-201ENST00000374379 SAMD1Q6SPF0 538 aaPredicted RBP15.9■□□□□ 0.14
CLIC4-201ENST00000374379 RICTORQ6R327 1708 aa15.89■□□□□ 0.13
CLIC4-201ENST00000374379 ITGA6P23229 1130 aa15.89■□□□□ 0.13
CLIC4-201ENST00000374379 LSG1Q9H089 658 aaKnown RBP15.89■□□□□ 0.13
CLIC4-201ENST00000374379 ZNF335Q9H4Z2 1342 aaPredicted RBP15.89■□□□□ 0.13
CLIC4-201ENST00000374379 MARCH6O60337 910 aa15.89■□□□□ 0.13
CLIC4-201ENST00000374379 TAF5LO75529 589 aa15.89■□□□□ 0.13
CLIC4-201ENST00000374379 ADCY5O95622 1261 aa15.89■□□□□ 0.13
CLIC4-201ENST00000374379 ZNF589Q86UQ0 364 aaPredicted RBP15.89■□□□□ 0.13
CLIC4-201ENST00000374379 TRIM22Q8IYM9 498 aa15.89■□□□□ 0.13
CLIC4-201ENST00000374379 ANKARQ7Z5J8 1434 aa15.89■□□□□ 0.13
CLIC4-201ENST00000374379 SPATA31D1Q6ZQQ2 1576 aa15.89■□□□□ 0.13
CLIC4-201ENST00000374379 AMOTL1Q8IY63 956 aa15.89■□□□□ 0.13
CLIC4-201ENST00000374379 MIGA1Q8NAN2 632 aa15.89■□□□□ 0.13
CLIC4-201ENST00000374379 XAGE2Q96GT9 111 aa15.89■□□□□ 0.13
CLIC4-201ENST00000374379 C8orf37Q96NL8 207 aa15.89■□□□□ 0.13
CLIC4-201ENST00000374379 RNF113AO15541 343 aaKnown RBP15.88■□□□□ 0.13
CLIC4-201ENST00000374379 RANBP6O60518 1105 aaKnown RBP15.88■□□□□ 0.13
CLIC4-201ENST00000374379 CCDC191Q8NCU4 936 aa15.88■□□□□ 0.13
CLIC4-201ENST00000374379 BRD1O95696 1058 aa15.88■□□□□ 0.13
CLIC4-201ENST00000374379 POLA2Q14181 598 aa15.88■□□□□ 0.13
CLIC4-201ENST00000374379 OTUD7BQ6GQQ9 843 aa15.88■□□□□ 0.13
CLIC4-201ENST00000374379 RPS6KB1P23443 525 aa15.88■□□□□ 0.13
CLIC4-201ENST00000374379 TTLL5Q6EMB2 1281 aa15.88■□□□□ 0.13
CLIC4-201ENST00000374379 FSIP1Q8NA03 581 aa15.88■□□□□ 0.13
CLIC4-201ENST00000374379 CEP170BQ9Y4F5 1589 aaPredicted RBP15.87■□□□□ 0.13
CLIC4-201ENST00000374379 KBTBD3Q8NAB2 608 aa15.87■□□□□ 0.13
CLIC4-201ENST00000374379 HMGN5P82970 282 aaKnown RBP15.87■□□□□ 0.13
CLIC4-201ENST00000374379 CDC37L1Q7L3B6 337 aa15.87■□□□□ 0.13
CLIC4-201ENST00000374379 GPT2Q8TD30 523 aa15.87■□□□□ 0.13
CLIC4-201ENST00000374379 TPCN1Q9ULQ1 816 aa15.87■□□□□ 0.13
CLIC4-201ENST00000374379 LARGE1O95461 756 aa15.87■□□□□ 0.13
CLIC4-201ENST00000374379 NCOA7Q8NI08 942 aa15.87■□□□□ 0.13
CLIC4-201ENST00000374379 IL25Q9H293 177 aa15.87■□□□□ 0.13
CLIC4-201ENST00000374379 ATP10DQ9P241 1426 aa15.87■□□□□ 0.13
CLIC4-201ENST00000374379 PRC1O43663 620 aa15.86■□□□□ 0.13
CLIC4-201ENST00000374379 ZPR1O75312 459 aa15.86■□□□□ 0.13
CLIC4-201ENST00000374379 ZAP70P43403 619 aa15.86■□□□□ 0.13
CLIC4-201ENST00000374379 TMEM67Q5HYA8 995 aa15.86■□□□□ 0.13
CLIC4-201ENST00000374379 HOMER1Q86YM7 354 aa15.86■□□□□ 0.13
CLIC4-201ENST00000374379 ZNF652Q9Y2D9 606 aa15.86■□□□□ 0.13
CLIC4-201ENST00000374379 TECPR2O15040 1411 aa15.86■□□□□ 0.13
CLIC4-201ENST00000374379 PDILTQ8N807 584 aa15.86■□□□□ 0.13
CLIC4-201ENST00000374379 ADGRL3Q9HAR2 1447 aa15.86■□□□□ 0.13
CLIC4-201ENST00000374379 ADCY9O60503 1353 aa15.86■□□□□ 0.13
CLIC4-201ENST00000374379 MCM5P33992 734 aa15.86■□□□□ 0.13
CLIC4-201ENST00000374379 KCNQ4P56696 695 aa15.86■□□□□ 0.13
CLIC4-201ENST00000374379 DHX32Q7L7V1 743 aaKnown RBP15.86■□□□□ 0.13
CLIC4-201ENST00000374379 NAT10Q9H0A0 1025 aaKnown RBP15.86■□□□□ 0.13
CLIC4-201ENST00000374379 PTPDC1A2A3K4 754 aa15.85■□□□□ 0.13
CLIC4-201ENST00000374379 GOLGA8AA7E2F4 631 aa15.85■□□□□ 0.13
CLIC4-201ENST00000374379 BRINP3Q76B58 766 aa15.85■□□□□ 0.13
CLIC4-201ENST00000374379 CCAR2Q8N163 923 aaKnown RBP15.85■□□□□ 0.13
CLIC4-201ENST00000374379 TTC12Q9H892 705 aaPredicted RBP15.85■□□□□ 0.13
CLIC4-201ENST00000374379 NSFL1CQ9UNZ2 370 aaKnown RBP15.85■□□□□ 0.13
CLIC4-201ENST00000374379 CHGBP05060 677 aa15.85■□□□□ 0.13
CLIC4-201ENST00000374379 PI16Q6UXB8 463 aa15.85■□□□□ 0.13
CLIC4-201ENST00000374379 SLC12A7Q9Y666 1083 aa15.85■□□□□ 0.13
CLIC4-201ENST00000374379 ATP5JP18859 108 aa15.85■□□□□ 0.13
CLIC4-201ENST00000374379 CAVIN4Q5BKX8 364 aa15.85■□□□□ 0.13
CLIC4-201ENST00000374379 CCAR1Q8IX12 1150 aaKnown RBP15.85■□□□□ 0.13
CLIC4-201ENST00000374379 ZKSCAN3Q9BRR0 538 aa15.85■□□□□ 0.13
CLIC4-201ENST00000374379 PTPN12Q05209 780 aaKnown RBP15.85■□□□□ 0.13
CLIC4-201ENST00000374379 SYNE4Q8N205 404 aa15.85■□□□□ 0.13
CLIC4-201ENST00000374379 ADORA1P30542 326 aa15.84■□□□□ 0.13
CLIC4-201ENST00000374379 ANKIB1Q9P2G1 1089 aa15.84■□□□□ 0.13
CLIC4-201ENST00000374379 XBP1P17861 261 aa15.84■□□□□ 0.13
CLIC4-201ENST00000374379 ZNF165P49910 485 aa15.84■□□□□ 0.13
CLIC4-201ENST00000374379 METAP2P50579 478 aaKnown RBP eCLIP15.84■□□□□ 0.13
CLIC4-201ENST00000374379 TCIRG1Q13488 830 aa15.84■□□□□ 0.13
CLIC4-201ENST00000374379 ATP2B2Q01814 1243 aa15.84■□□□□ 0.13
CLIC4-201ENST00000374379 MAGEB6Q8N7X4 407 aa15.84■□□□□ 0.13
CLIC4-201ENST00000374379 MARCKSP29966 332 aaPredicted RBP15.83■□□□□ 0.13
CLIC4-201ENST00000374379 SLC26A6Q9BXS9 759 aa15.83■□□□□ 0.13
CLIC4-201ENST00000374379 COPRSQ9NQ92 184 aa15.83■□□□□ 0.12
CLIC4-201ENST00000374379 DIP2AQ14689 1571 aa15.83■□□□□ 0.12
CLIC4-201ENST00000374379 CDKL5O76039 1030 aa15.83■□□□□ 0.12
CLIC4-201ENST00000374379 OLFM4Q6UX06 510 aa15.83■□□□□ 0.12
CLIC4-201ENST00000374379 ERVV-2B6SEH9 535 aa15.82■□□□□ 0.12
CLIC4-201ENST00000374379 SHPRHQ149N8 1683 aa15.82■□□□□ 0.12
CLIC4-201ENST00000374379 CYP7A1P22680 504 aa15.82■□□□□ 0.12
CLIC4-201ENST00000374379 IARSP41252 1262 aaKnown RBP15.82■□□□□ 0.12
CLIC4-201ENST00000374379 CEP57L1Q8IYX8 460 aa15.82■□□□□ 0.12
CLIC4-201ENST00000374379 JMYQ8N9B5 988 aa15.82■□□□□ 0.12
CLIC4-201ENST00000374379 DNAJC25Q9H1X3 360 aa15.82■□□□□ 0.12
CLIC4-201ENST00000374379 ZBTB1Q9Y2K1 713 aa15.82■□□□□ 0.12
CLIC4-201ENST00000374379 CCDC152Q4G0S7 254 aa15.82■□□□□ 0.12
CLIC4-201ENST00000374379 ANO6Q4KMQ2 910 aa15.82■□□□□ 0.12
CLIC4-201ENST00000374379 UTP14AQ9BVJ6 771 aaKnown RBP15.82■□□□□ 0.12
CLIC4-201ENST00000374379 SLC4A4Q9Y6R1 1079 aa15.82■□□□□ 0.12
CLIC4-201ENST00000374379 NRKQ7Z2Y5 1582 aa15.82■□□□□ 0.12
CLIC4-201ENST00000374379 WDR17Q8IZU2 1322 aa15.81■□□□□ 0.12
CLIC4-201ENST00000374379 GPAA1O43292 621 aa15.81■□□□□ 0.12
CLIC4-201ENST00000374379 SERPINC1P01008 464 aa15.81■□□□□ 0.12
CLIC4-201ENST00000374379 ZFYP08048 801 aaPredicted RBP15.81■□□□□ 0.12
CLIC4-201ENST00000374379 TTF1Q15361 905 aaPredicted RBP15.81■□□□□ 0.12
CLIC4-201ENST00000374379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms