RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SH3TC1Q8TE82 1336 aa23.52■■□□□ 1.36
HDAC1-201ENST00000373548 METTL24Q5JXM2 366 aa23.52■■□□□ 1.36
HDAC1-201ENST00000373548 RUFY3Q7L099 469 aa23.52■■□□□ 1.36
HDAC1-201ENST00000373548 AK7Q96M32 723 aa23.52■■□□□ 1.36
HDAC1-201ENST00000373548 ZDHHC9Q9Y397 364 aa23.52■■□□□ 1.36
HDAC1-201ENST00000373548 LRP5O75197 1615 aa23.52■■□□□ 1.36
HDAC1-201ENST00000373548 DDX60Q8IY21 1712 aaKnown RBP23.52■■□□□ 1.36
HDAC1-201ENST00000373548 RPAP1Q9BWH6 1393 aaPredicted RBP23.52■■□□□ 1.36
HDAC1-201ENST00000373548 MCMDC2Q4G0Z9 681 aa23.51■■□□□ 1.35
HDAC1-201ENST00000373548 PTF1AQ7RTS3 328 aa23.51■■□□□ 1.35
HDAC1-201ENST00000373548 TICAM2Q86XR7 235 aa23.51■■□□□ 1.35
HDAC1-201ENST00000373548 LINC00116Q8NCU8 138 aa23.51■■□□□ 1.35
HDAC1-201ENST00000373548 PARP10Q53GL7 1025 aa23.51■■□□□ 1.35
HDAC1-201ENST00000373548 CCDC158Q5M9N0 1113 aa23.51■■□□□ 1.35
HDAC1-201ENST00000373548 USPL1Q5W0Q7 1092 aa23.51■■□□□ 1.35
HDAC1-201ENST00000373548 CCDC129Q6ZRS4 1044 aa23.51■■□□□ 1.35
HDAC1-201ENST00000373548 UTP14AQ9BVJ6 771 aaKnown RBP23.51■■□□□ 1.35
HDAC1-201ENST00000373548 CYP46A1Q9Y6A2 500 aa23.51■■□□□ 1.35
HDAC1-201ENST00000373548 BAG4O95429 457 aaKnown RBP23.5■■□□□ 1.35
HDAC1-201ENST00000373548 ATP2B3Q16720 1220 aa23.5■■□□□ 1.35
HDAC1-201ENST00000373548 GORABQ5T7V8 394 aa23.5■■□□□ 1.35
HDAC1-201ENST00000373548 VPS53Q5VIR6 699 aa23.5■■□□□ 1.35
HDAC1-201ENST00000373548 RNF20Q5VTR2 975 aa23.5■■□□□ 1.35
HDAC1-201ENST00000373548 CNNM1Q9NRU3 951 aa23.5■■□□□ 1.35
HDAC1-201ENST00000373548 BTAF1O14981 1849 aa23.5■■□□□ 1.35
HDAC1-201ENST00000373548 FAM177BA6PVY3 158 aa23.5■■□□□ 1.35
HDAC1-201ENST00000373548 HCLS1P14317 486 aaPredicted RBP23.5■■□□□ 1.35
HDAC1-201ENST00000373548 TTC39AQ5SRH9 613 aa23.5■■□□□ 1.35
HDAC1-201ENST00000373548 VGLL2Q8N8G2 317 aa23.5■■□□□ 1.35
HDAC1-201ENST00000373548 PDRG1Q9NUG6 133 aa23.5■■□□□ 1.35
HDAC1-201ENST00000373548 LIMCH1Q9UPQ0 1083 aa23.5■■□□□ 1.35
HDAC1-201ENST00000373548 LAMB2P55268 1798 aa23.49■■□□□ 1.35
HDAC1-201ENST00000373548 TAF6LQ9Y6J9 622 aa23.49■■□□□ 1.35
HDAC1-201ENST00000373548 SLFNL1Q499Z3 407 aa23.48■■□□□ 1.35
HDAC1-201ENST00000373548 LARP6Q9BRS8 491 aaKnown RBP23.48■■□□□ 1.35
HDAC1-201ENST00000373548 HMG20BQ9P0W2 317 aa23.48■■□□□ 1.35
HDAC1-201ENST00000373548 NIP7Q9Y221 180 aaKnown RBP eCLIP23.48■■□□□ 1.35
HDAC1-201ENST00000373548 NHSQ6T4R5 1651 aa23.48■■□□□ 1.35
HDAC1-201ENST00000373548 KCNQ4P56696 695 aa23.48■■□□□ 1.35
HDAC1-201ENST00000373548 ZMYM1Q5SVZ6 1142 aa23.48■■□□□ 1.35
HDAC1-201ENST00000373548 HELLSQ9NRZ9 838 aa23.48■■□□□ 1.35
HDAC1-201ENST00000373548 NTSR2O95665 410 aa23.47■■□□□ 1.35
HDAC1-201ENST00000373548 TSGA10IPQ3SY00 556 aa23.47■■□□□ 1.35
HDAC1-201ENST00000373548 ABCC12Q96J65 1359 aa23.47■■□□□ 1.35
HDAC1-201ENST00000373548 PSMA5P28066 241 aa23.47■■□□□ 1.35
HDAC1-201ENST00000373548 COL9A3Q14050 684 aaPredicted RBP23.47■■□□□ 1.35
HDAC1-201ENST00000373548 SCARF1Q14162 830 aa23.47■■□□□ 1.35
HDAC1-201ENST00000373548 AKAP11Q9UKA4 1901 aa23.46■■□□□ 1.35
HDAC1-201ENST00000373548 FKBP4Q02790 459 aaKnown RBP eCLIP23.46■■□□□ 1.35
HDAC1-201ENST00000373548 RNF113AO15541 343 aaKnown RBP23.45■■□□□ 1.35
HDAC1-201ENST00000373548 PTMSP20962 102 aa23.45■■□□□ 1.35
HDAC1-201ENST00000373548 ZNF652Q9Y2D9 606 aa23.45■■□□□ 1.35
HDAC1-201ENST00000373548 U3KPZ7 1027 aaPredicted RBP23.45■■□□□ 1.35
HDAC1-201ENST00000373548 CNTNAP4Q9C0A0 1308 aa23.45■■□□□ 1.34
HDAC1-201ENST00000373548 PDE8BO95263 885 aa23.45■■□□□ 1.34
HDAC1-201ENST00000373548 LARGE1O95461 756 aa23.45■■□□□ 1.34
HDAC1-201ENST00000373548 GOLGA6L22H0YM25 854 aa23.44■■□□□ 1.34
HDAC1-201ENST00000373548 BRD1O95696 1058 aa23.44■■□□□ 1.34
HDAC1-201ENST00000373548 CLEC4GQ6UXB4 293 aa23.44■■□□□ 1.34
HDAC1-201ENST00000373548 MYH7P12883 1935 aa23.43■■□□□ 1.34
HDAC1-201ENST00000373548 ARAP2Q8WZ64 1704 aa23.43■■□□□ 1.34
HDAC1-201ENST00000373548 ZAP70P43403 619 aa23.43■■□□□ 1.34
HDAC1-201ENST00000373548 FAM182BQ5T319 152 aa23.43■■□□□ 1.34
HDAC1-201ENST00000373548 BLOC1S2Q6QNY1 142 aa23.43■■□□□ 1.34
HDAC1-201ENST00000373548 MAST3O60307 1309 aa23.43■■□□□ 1.34
HDAC1-201ENST00000373548 SCN7AQ01118 1682 aa23.43■■□□□ 1.34
HDAC1-201ENST00000373548 GZF1Q9H116 711 aaPredicted RBP23.42■■□□□ 1.34
HDAC1-201ENST00000373548 SEC31BQ9NQW1 1179 aa23.42■■□□□ 1.34
HDAC1-201ENST00000373548 MROH5Q6ZUA9 1318 aa23.42■■□□□ 1.34
HDAC1-201ENST00000373548 MEX3CQ5U5Q3 659 aaKnown RBP23.42■■□□□ 1.34
HDAC1-201ENST00000373548 PI16Q6UXB8 463 aa23.42■■□□□ 1.34
HDAC1-201ENST00000373548 RPS6KB1P23443 525 aa23.41■■□□□ 1.34
HDAC1-201ENST00000373548 ZNF512BQ96KM6 892 aaPredicted RBP23.41■■□□□ 1.34
HDAC1-201ENST00000373548 GJD4Q96KN9 370 aaPredicted RBP23.41■■□□□ 1.34
HDAC1-201ENST00000373548 ZSCAN31Q96LW9 406 aaPredicted RBP23.41■■□□□ 1.34
HDAC1-201ENST00000373548 RTL9Q8NET4 1388 aa23.41■■□□□ 1.34
HDAC1-201ENST00000373548 CYP21A2P08686 494 aa23.41■■□□□ 1.34
HDAC1-201ENST00000373548 HSP90B1P14625 803 aaKnown RBP23.41■■□□□ 1.34
HDAC1-201ENST00000373548 HSPA1LP34931 641 aa23.41■■□□□ 1.34
HDAC1-201ENST00000373548 MCAMP43121 646 aa23.41■■□□□ 1.34
HDAC1-201ENST00000373548 KRT32Q14532 448 aa23.41■■□□□ 1.34
HDAC1-201ENST00000373548 SKOR2Q2VWA4 1001 aaPredicted RBP23.41■■□□□ 1.34
HDAC1-201ENST00000373548 CCDC152Q4G0S7 254 aa23.41■■□□□ 1.34
HDAC1-201ENST00000373548 MCTP1Q6DN14 999 aa23.41■■□□□ 1.34
HDAC1-201ENST00000373548 DSCC1Q9BVC3 393 aa23.41■■□□□ 1.34
HDAC1-201ENST00000373548 SH2B1Q9NRF2 756 aaPredicted RBP23.41■■□□□ 1.34
HDAC1-201ENST00000373548 SBF2Q86WG5 1849 aa23.4■■□□□ 1.34
HDAC1-201ENST00000373548 FGFR2P21802 821 aa23.4■■□□□ 1.34
HDAC1-201ENST00000373548 HELBQ8NG08 1087 aaPredicted RBP23.4■■□□□ 1.34
HDAC1-201ENST00000373548 ALDH8A1Q9H2A2 487 aaPredicted RBP23.4■■□□□ 1.34
HDAC1-201ENST00000373548 M0R2C6 588 aa23.39■■□□□ 1.34
HDAC1-201ENST00000373548 PUM3Q15397 648 aaKnown RBP23.39■■□□□ 1.34
HDAC1-201ENST00000373548 LRRFIP1Q32MZ4 808 aaKnown RBP23.39■■□□□ 1.34
HDAC1-201ENST00000373548 RC3H1Q5TC82 1133 aaKnown RBP23.39■■□□□ 1.34
HDAC1-201ENST00000373548 FOXD4L5Q5VV16 416 aaPredicted RBP23.39■■□□□ 1.34
HDAC1-201ENST00000373548 FOXD4L4Q8WXT5 416 aaPredicted RBP23.39■■□□□ 1.34
HDAC1-201ENST00000373548 OSBP2Q969R2 916 aa23.39■■□□□ 1.34
HDAC1-201ENST00000373548 AFF2P51816 1311 aa23.39■■□□□ 1.33
HDAC1-201ENST00000373548 ME3Q16798 604 aa23.39■■□□□ 1.33
HDAC1-201ENST00000373548 SMIM5Q71RC9 77 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms