RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 NUTM1Q86Y26 1132 aa12.29□□□□□ -0.44
PGK1-201ENST00000373316 KCNG4Q8TDN1 519 aa12.29□□□□□ -0.44
PGK1-201ENST00000373316 SYTL4Q96C24 671 aaPredicted RBP12.29□□□□□ -0.44
PGK1-201ENST00000373316 PTCD1O75127 700 aaKnown RBP12.29□□□□□ -0.44
PGK1-201ENST00000373316 CWC25Q9NXE8 425 aaPredicted RBP12.29□□□□□ -0.44
PGK1-201ENST00000373316 MEGF6O75095 1541 aa12.29□□□□□ -0.44
PGK1-201ENST00000373316 SSFA2P28290 1259 aa12.29□□□□□ -0.44
PGK1-201ENST00000373316 CAVIN4Q5BKX8 364 aa12.29□□□□□ -0.44
PGK1-201ENST00000373316 KSR2Q6VAB6 950 aa12.29□□□□□ -0.44
PGK1-201ENST00000373316 TMOD3Q9NYL9 352 aa12.29□□□□□ -0.44
PGK1-201ENST00000373316 RNMTO43148 476 aaKnown RBP12.29□□□□□ -0.44
PGK1-201ENST00000373316 NEK1Q96PY6 1258 aa12.29□□□□□ -0.44
PGK1-201ENST00000373316 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
PGK1-201ENST00000373316 ZNF213O14771 459 aa12.28□□□□□ -0.44
PGK1-201ENST00000373316 SEC24BO95487 1268 aa12.28□□□□□ -0.44
PGK1-201ENST00000373316 SYCP1Q15431 976 aa12.28□□□□□ -0.44
PGK1-201ENST00000373316 UBXN4Q92575 508 aa12.28□□□□□ -0.44
PGK1-201ENST00000373316 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
PGK1-201ENST00000373316 SSRP1Q08945 709 aaKnown RBP12.28□□□□□ -0.44
PGK1-201ENST00000373316 METTL24Q5JXM2 366 aa12.28□□□□□ -0.44
PGK1-201ENST00000373316 RMND1Q9NWS8 449 aa12.28□□□□□ -0.44
PGK1-201ENST00000373316 CT47A1Q5JQC4 288 aaPredicted RBP12.28□□□□□ -0.44
PGK1-201ENST00000373316 NCOA7Q8NI08 942 aa12.28□□□□□ -0.44
PGK1-201ENST00000373316 MYO1BO43795 1136 aa12.28□□□□□ -0.44
PGK1-201ENST00000373316 CALRP27797 417 aaKnown RBP12.28□□□□□ -0.44
PGK1-201ENST00000373316 SPAG1Q07617 926 aa12.28□□□□□ -0.44
PGK1-201ENST00000373316 SPTY2D1Q68D10 685 aaPredicted RBP12.28□□□□□ -0.44
PGK1-201ENST00000373316 SIRT2Q8IXJ6 389 aa12.28□□□□□ -0.44
PGK1-201ENST00000373316 CTAGE1Q96RT6 745 aa12.28□□□□□ -0.44
PGK1-201ENST00000373316 KRT23Q9C075 422 aa12.28□□□□□ -0.44
PGK1-201ENST00000373316 ZBTB7BO15156 539 aaPredicted RBP12.27□□□□□ -0.44
PGK1-201ENST00000373316 SMARCA5O60264 1052 aaPredicted RBP12.27□□□□□ -0.44
PGK1-201ENST00000373316 SDSP20132 328 aa12.27□□□□□ -0.44
PGK1-201ENST00000373316 TICAM2Q86XR7 235 aa12.27□□□□□ -0.44
PGK1-201ENST00000373316 TSG101Q99816 390 aa12.27□□□□□ -0.44
PGK1-201ENST00000373316 GOLIM4O00461 696 aa12.27□□□□□ -0.44
PGK1-201ENST00000373316 KIF5BP33176 963 aa12.27□□□□□ -0.44
PGK1-201ENST00000373316 AMPD3Q01432 767 aa12.27□□□□□ -0.44
PGK1-201ENST00000373316 IQCA1Q86XH1 822 aa12.27□□□□□ -0.44
PGK1-201ENST00000373316 LDHCP07864 332 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 IL15P40933 162 aaPredicted RBP12.27□□□□□ -0.45
PGK1-201ENST00000373316 FAM182BQ5T319 152 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 TMCO3Q6UWJ1 677 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.27□□□□□ -0.45
PGK1-201ENST00000373316 LINS1Q8NG48 757 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 TMX3Q96JJ7 454 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 MYD88Q99836 296 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 SIL1Q9H173 461 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 PPP1R12BO60237 982 aaPredicted RBP12.27□□□□□ -0.45
PGK1-201ENST00000373316 KIF5CO60282 957 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 GNAT2P19087 354 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 GJB2P29033 226 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 ZSCAN23Q3MJ62 389 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 FKBP15Q5T1M5 1219 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 CCDC181Q5TID7 509 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 PPP1R42Q7Z4L9 355 aa12.27□□□□□ -0.45
PGK1-201ENST00000373316 C16orf71Q8IYS4 520 aaPredicted RBP12.27□□□□□ -0.45
PGK1-201ENST00000373316 FKBP4Q02790 459 aaKnown RBP eCLIP12.26□□□□□ -0.45
PGK1-201ENST00000373316 ODF2Q5BJF6 829 aa12.26□□□□□ -0.45
PGK1-201ENST00000373316 TSHZ3Q63HK5 1081 aa12.26□□□□□ -0.45
PGK1-201ENST00000373316 ANKRD18AQ8IVF6 992 aa12.26□□□□□ -0.45
PGK1-201ENST00000373316 CTCFLQ8NI51 663 aaPredicted RBP12.26□□□□□ -0.45
PGK1-201ENST00000373316 NAPBQ9H115 298 aa12.26□□□□□ -0.45
PGK1-201ENST00000373316 SOS2Q07890 1332 aaPredicted RBP12.26□□□□□ -0.45
PGK1-201ENST00000373316 FAM200AQ8TCP9 573 aa12.26□□□□□ -0.45
PGK1-201ENST00000373316 EHMT1Q9H9B1 1298 aa12.26□□□□□ -0.45
PGK1-201ENST00000373316 KRT18P05783 430 aaKnown RBP12.26□□□□□ -0.45
PGK1-201ENST00000373316 STK3Q13188 491 aa12.26□□□□□ -0.45
PGK1-201ENST00000373316 CEP85Q6P2H3 762 aa12.26□□□□□ -0.45
PGK1-201ENST00000373316 DNAI2Q9GZS0 605 aa12.26□□□□□ -0.45
PGK1-201ENST00000373316 DEF6Q9H4E7 631 aa12.26□□□□□ -0.45
PGK1-201ENST00000373316 CLIP2Q9UDT6 1046 aa12.26□□□□□ -0.45
PGK1-201ENST00000373316 SLC12A7Q9Y666 1083 aa12.26□□□□□ -0.45
PGK1-201ENST00000373316 GOLGA6L7A0A1B0GV03 622 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 PPP1R2P41236 205 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 EIF4A1P60842 406 aaKnown RBP12.25□□□□□ -0.45
PGK1-201ENST00000373316 MAP3K2Q9Y2U5 619 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 TOP1P11387 765 aaKnown RBP12.25□□□□□ -0.45
PGK1-201ENST00000373316 ARHGAP29Q52LW3 1261 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 SPC24Q8NBT2 197 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 LLPHQ9BRT6 129 aaKnown RBP12.25□□□□□ -0.45
PGK1-201ENST00000373316 LRP2BPQ9P2M1 347 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 CALM1P0DP23 149 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 CALM2P0DP24 149 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 CALM3P0DP25 149 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 TUBB2AQ13885 445 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 CDC5LQ99459 802 aaKnown RBP12.25□□□□□ -0.45
PGK1-201ENST00000373316 TUBB2BQ9BVA1 445 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 UBAP1LF5GYI3 381 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 BRAPQ7Z569 592 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 OTUD7AQ8TE49 926 aaPredicted RBP12.25□□□□□ -0.45
PGK1-201ENST00000373316 USP25Q9UHP3 1055 aa12.25□□□□□ -0.45
PGK1-201ENST00000373316 PHKG2P15735 406 aa12.24□□□□□ -0.45
PGK1-201ENST00000373316 GNAQP50148 359 aa12.24□□□□□ -0.45
PGK1-201ENST00000373316 GSTO1P78417 241 aa12.24□□□□□ -0.45
PGK1-201ENST00000373316 ZRSR2Q15696 482 aaKnown RBP12.24□□□□□ -0.45
PGK1-201ENST00000373316 TMEM266Q2M3C6 531 aa12.24□□□□□ -0.45
PGK1-201ENST00000373316 MEX3CQ5U5Q3 659 aaKnown RBP12.24□□□□□ -0.45
PGK1-201ENST00000373316 CCDC191Q8NCU4 936 aa12.24□□□□□ -0.45
PGK1-201ENST00000373316 CAMTA1Q9Y6Y1 1673 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms