RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 ANKRD1Q15327 319 aa28.32■■■□□ 2.12
CDK9-201ENST00000373264 DDX11Q96FC9 970 aa28.32■■■□□ 2.12
CDK9-201ENST00000373264 BRF1Q92994 677 aa28.31■■■□□ 2.12
CDK9-201ENST00000373264 U3KPZ7 1027 aaPredicted RBP28.31■■■□□ 2.12
CDK9-201ENST00000373264 HSP90B1P14625 803 aaKnown RBP28.3■■■□□ 2.12
CDK9-201ENST00000373264 ISCA1Q9BUE6 129 aa28.3■■■□□ 2.12
CDK9-201ENST00000373264 PHF14O94880 888 aa28.3■■■□□ 2.12
CDK9-201ENST00000373264 IFIT1P09914 478 aaKnown RBP28.3■■■□□ 2.12
CDK9-201ENST00000373264 MSNP26038 577 aaKnown RBP28.3■■■□□ 2.12
CDK9-201ENST00000373264 ALDH8A1Q9H2A2 487 aaPredicted RBP28.3■■■□□ 2.12
CDK9-201ENST00000373264 ABCA3Q99758 1704 aa28.29■■■□□ 2.12
CDK9-201ENST00000373264 FOSBP53539 338 aa28.29■■■□□ 2.12
CDK9-201ENST00000373264 CHST3Q7LGC8 479 aa28.29■■■□□ 2.12
CDK9-201ENST00000373264 FKBP4Q02790 459 aaKnown RBP eCLIP28.29■■■□□ 2.12
CDK9-201ENST00000373264 TCIRG1Q13488 830 aa28.29■■■□□ 2.12
CDK9-201ENST00000373264 HSP90AB3PQ58FF7 597 aa28.29■■■□□ 2.12
CDK9-201ENST00000373264 TTLL5Q6EMB2 1281 aa28.29■■■□□ 2.12
CDK9-201ENST00000373264 GTF3C6Q969F1 213 aa28.29■■■□□ 2.12
CDK9-201ENST00000373264 SH3TC1Q8TE82 1336 aa28.29■■■□□ 2.12
CDK9-201ENST00000373264 STRCQ7RTU9 1775 aa28.28■■■□□ 2.12
CDK9-201ENST00000373264 GPTP24298 496 aa28.28■■■□□ 2.12
CDK9-201ENST00000373264 M0R2C6 588 aa28.28■■■□□ 2.12
CDK9-201ENST00000373264 SCARF1Q14162 830 aa28.28■■■□□ 2.12
CDK9-201ENST00000373264 PI16Q6UXB8 463 aa28.28■■■□□ 2.12
CDK9-201ENST00000373264 USP25Q9UHP3 1055 aa28.28■■■□□ 2.12
CDK9-201ENST00000373264 MAST3O60307 1309 aa28.28■■■□□ 2.12
CDK9-201ENST00000373264 PALLDQ8WX93 1383 aa28.27■■■□□ 2.12
CDK9-201ENST00000373264 KRT32Q14532 448 aa28.27■■■□□ 2.12
CDK9-201ENST00000373264 HLFQ16534 295 aa28.27■■■□□ 2.12
CDK9-201ENST00000373264 NOL7Q9UMY1 257 aaKnown RBP28.27■■■□□ 2.12
CDK9-201ENST00000373264 SCRN1Q12765 414 aa28.27■■■□□ 2.12
CDK9-201ENST00000373264 ZMYM1Q5SVZ6 1142 aa28.27■■■□□ 2.12
CDK9-201ENST00000373264 RFX7Q2KHR2 1363 aa28.26■■■□□ 2.12
CDK9-201ENST00000373264 LIG1P18858 919 aa28.26■■■□□ 2.11
CDK9-201ENST00000373264 ATG3Q9NT62 314 aa28.26■■■□□ 2.11
CDK9-201ENST00000373264 BTG4Q9NY30 223 aa28.26■■■□□ 2.11
CDK9-201ENST00000373264 HSPD1P10809 573 aaKnown RBP28.26■■■□□ 2.11
CDK9-201ENST00000373264 CCDC57Q2TAC2 916 aa28.26■■■□□ 2.11
CDK9-201ENST00000373264 GPR108Q9NPR9 543 aa28.26■■■□□ 2.11
CDK9-201ENST00000373264 LAMA4Q16363 1823 aa28.26■■■□□ 2.11
CDK9-201ENST00000373264 APOBRQ0VD83 1088 aa28.25■■■□□ 2.11
CDK9-201ENST00000373264 CAMK4Q16566 473 aa28.25■■■□□ 2.11
CDK9-201ENST00000373264 OSBP2Q969R2 916 aa28.25■■■□□ 2.11
CDK9-201ENST00000373264 KRT85P78386 507 aa28.24■■■□□ 2.11
CDK9-201ENST00000373264 FGD1P98174 961 aa28.24■■■□□ 2.11
CDK9-201ENST00000373264 SLC4A9Q96Q91 983 aa28.24■■■□□ 2.11
CDK9-201ENST00000373264 CEP126Q9P2H0 1117 aa28.24■■■□□ 2.11
CDK9-201ENST00000373264 FUCA2Q9BTY2 467 aa28.24■■■□□ 2.11
CDK9-201ENST00000373264 XAGE2Q96GT9 111 aa28.23■■■□□ 2.11
CDK9-201ENST00000373264 PDCP20941 246 aa28.23■■■□□ 2.11
CDK9-201ENST00000373264 CCT2P78371 535 aaKnown RBP28.23■■■□□ 2.11
CDK9-201ENST00000373264 NCOA5Q9HCD5 579 aaKnown RBP28.23■■■□□ 2.11
CDK9-201ENST00000373264 HELLSQ9NRZ9 838 aa28.23■■■□□ 2.11
CDK9-201ENST00000373264 RNF113AO15541 343 aaKnown RBP28.22■■■□□ 2.11
CDK9-201ENST00000373264 CIAO1O76071 339 aa28.22■■■□□ 2.11
CDK9-201ENST00000373264 GPHNQ9NQX3 736 aaPredicted RBP28.22■■■□□ 2.11
CDK9-201ENST00000373264 HS1BP3Q53T59 392 aa28.21■■■□□ 2.11
CDK9-201ENST00000373264 E7EWF7 191 aa28.2■■■□□ 2.11
CDK9-201ENST00000373264 ZNF830Q96NB3 372 aaPredicted RBP28.2■■■□□ 2.11
CDK9-201ENST00000373264 NAP1L2Q9ULW6 460 aaPredicted RBP28.2■■■□□ 2.11
CDK9-201ENST00000373264 ZKSCAN5Q9Y2L8 839 aa28.2■■■□□ 2.11
CDK9-201ENST00000373264 FOXP2O15409 715 aa28.2■■■□□ 2.1
CDK9-201ENST00000373264 CTDNEP1O95476 244 aa28.2■■■□□ 2.1
CDK9-201ENST00000373264 HAND2P61296 217 aa28.2■■■□□ 2.1
CDK9-201ENST00000373264 GORABQ5T7V8 394 aa28.2■■■□□ 2.1
CDK9-201ENST00000373264 KIF6Q6ZMV9 814 aa28.19■■■□□ 2.1
CDK9-201ENST00000373264 DHX32Q7L7V1 743 aaKnown RBP28.19■■■□□ 2.1
CDK9-201ENST00000373264 AP5Z1O43299 807 aa28.19■■■□□ 2.1
CDK9-201ENST00000373264 CSPP1Q1MSJ5 1256 aa28.19■■■□□ 2.1
CDK9-201ENST00000373264 TTC39AQ5SRH9 613 aa28.19■■■□□ 2.1
CDK9-201ENST00000373264 SYTL4Q96C24 671 aaPredicted RBP28.19■■■□□ 2.1
CDK9-201ENST00000373264 DSCC1Q9BVC3 393 aa28.19■■■□□ 2.1
CDK9-201ENST00000373264 ZAP70P43403 619 aa28.18■■■□□ 2.1
CDK9-201ENST00000373264 TAF7LQ5H9L4 462 aa28.18■■■□□ 2.1
CDK9-201ENST00000373264 SPATA32Q96LK8 384 aa28.18■■■□□ 2.1
CDK9-201ENST00000373264 PTMAP06454 111 aaKnown RBP28.18■■■□□ 2.1
CDK9-201ENST00000373264 PLCB2Q00722 1185 aa28.18■■■□□ 2.1
CDK9-201ENST00000373264 CEBPZQ03701 1054 aaKnown RBP28.18■■■□□ 2.1
CDK9-201ENST00000373264 LEO1Q8WVC0 666 aaPredicted RBP28.18■■■□□ 2.1
CDK9-201ENST00000373264 FTOQ9C0B1 505 aaKnown RBP eCLIP28.18■■■□□ 2.1
CDK9-201ENST00000373264 GREM2Q9H772 168 aa28.18■■■□□ 2.1
CDK9-201ENST00000373264 EXOSC10Q01780 885 aaKnown RBP28.17■■■□□ 2.1
CDK9-201ENST00000373264 ADCY5O95622 1261 aa28.17■■■□□ 2.1
CDK9-201ENST00000373264 PCCAP05165 728 aaPredicted RBP28.17■■■□□ 2.1
CDK9-201ENST00000373264 WASHC4Q2M389 1173 aa28.17■■■□□ 2.1
CDK9-201ENST00000373264 CCDC39Q9UFE4 941 aa28.17■■■□□ 2.1
CDK9-201ENST00000373264 RESTQ13127 1097 aa28.16■■■□□ 2.1
CDK9-201ENST00000373264 CKAP2LQ8IYA6 745 aa28.16■■■□□ 2.1
CDK9-201ENST00000373264 ZBTB38Q8NAP3 1195 aaPredicted RBP28.16■■■□□ 2.1
CDK9-201ENST00000373264 NSUN7Q8NE18 718 aaKnown RBP28.16■■■□□ 2.1
CDK9-201ENST00000373264 PGBD1Q96JS3 809 aa28.16■■■□□ 2.1
CDK9-201ENST00000373264 IFIT5Q13325 482 aaKnown RBP28.16■■■□□ 2.1
CDK9-201ENST00000373264 DACT1Q9NYF0 836 aa28.16■■■□□ 2.1
CDK9-201ENST00000373264 LETM1O95202 739 aaPredicted RBP28.15■■■□□ 2.1
CDK9-201ENST00000373264 PUS7LQ9H0K6 701 aaKnown RBP28.15■■■□□ 2.1
CDK9-201ENST00000373264 ZBTB1Q9Y2K1 713 aa28.15■■■□□ 2.1
CDK9-201ENST00000373264 PFKFB2O60825 505 aa28.15■■■□□ 2.1
CDK9-201ENST00000373264 CCDC158Q5M9N0 1113 aa28.15■■■□□ 2.1
CDK9-201ENST00000373264 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.15■■■□□ 2.1
CDK9-201ENST00000373264 MAP3K15Q6ZN16 1313 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms