RNA–Protein interactions for RNA: ENST00000373093.4

GRIK3-202, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIK3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-202ENST00000373093 MTX1Q13505 466 aa12.89□□□□□ -0.35
GRIK3-202ENST00000373093 C11orf57Q6ZUT1 292 aaPredicted RBP12.89□□□□□ -0.35
GRIK3-202ENST00000373093 STOX1Q6ZVD7 989 aa12.89□□□□□ -0.35
GRIK3-202ENST00000373093 ZBTB3Q9H5J0 574 aa12.89□□□□□ -0.35
GRIK3-202ENST00000373093 TUBGCP6Q96RT7 1819 aa12.89□□□□□ -0.35
GRIK3-202ENST00000373093 H3BQV1 296 aa12.88□□□□□ -0.35
GRIK3-202ENST00000373093 DDX58O95786 925 aaKnown RBP12.88□□□□□ -0.35
GRIK3-202ENST00000373093 ZNF75DP51815 510 aa12.88□□□□□ -0.35
GRIK3-202ENST00000373093 IFFO2Q5TF58 517 aa12.88□□□□□ -0.35
GRIK3-202ENST00000373093 ANKLE2Q86XL3 938 aa12.88□□□□□ -0.35
GRIK3-202ENST00000373093 KCNH5Q8NCM2 988 aa12.88□□□□□ -0.35
GRIK3-202ENST00000373093 LEO1Q8WVC0 666 aaPredicted RBP12.88□□□□□ -0.35
GRIK3-202ENST00000373093 FMNL2Q96PY5 1086 aa12.88□□□□□ -0.35
GRIK3-202ENST00000373093 PTPN12Q05209 780 aaKnown RBP12.88□□□□□ -0.35
GRIK3-202ENST00000373093 CCDC112Q8NEF3 446 aa12.88□□□□□ -0.35
GRIK3-202ENST00000373093 ANKRD7Q92527 254 aa12.88□□□□□ -0.35
GRIK3-202ENST00000373093 TNNI3KQ59H18 835 aa12.87□□□□□ -0.35
GRIK3-202ENST00000373093 TTLL7Q6ZT98 887 aa12.87□□□□□ -0.35
GRIK3-202ENST00000373093 ERC1Q8IUD2 1116 aa12.87□□□□□ -0.35
GRIK3-202ENST00000373093 ZNF215Q9UL58 517 aaPredicted RBP12.87□□□□□ -0.35
GRIK3-202ENST00000373093 FPGT-TNNI3KV9GXZ4 949 aa12.87□□□□□ -0.35
GRIK3-202ENST00000373093 AMOTQ4VCS5 1084 aa12.87□□□□□ -0.35
GRIK3-202ENST00000373093 ISM2Q6H9L7 571 aa12.87□□□□□ -0.35
GRIK3-202ENST00000373093 NEK1Q96PY6 1258 aa12.87□□□□□ -0.35
GRIK3-202ENST00000373093 SH2B1Q9NRF2 756 aaPredicted RBP12.87□□□□□ -0.35
GRIK3-202ENST00000373093 BABAM1Q9NWV8 329 aa12.87□□□□□ -0.35
GRIK3-202ENST00000373093 SCRN1Q12765 414 aa12.87□□□□□ -0.35
GRIK3-202ENST00000373093 LRRC24Q50LG9 513 aa12.87□□□□□ -0.35
GRIK3-202ENST00000373093 ZSCAN31Q96LW9 406 aaPredicted RBP12.87□□□□□ -0.35
GRIK3-202ENST00000373093 PUS3Q9BZE2 481 aaKnown RBP12.87□□□□□ -0.35
GRIK3-202ENST00000373093 VGLL3A8MV65 326 aa12.86□□□□□ -0.35
GRIK3-202ENST00000373093 A1BGP04217 495 aa12.86□□□□□ -0.35
GRIK3-202ENST00000373093 GORABQ5T7V8 394 aa12.86□□□□□ -0.35
GRIK3-202ENST00000373093 PI16Q6UXB8 463 aa12.86□□□□□ -0.35
GRIK3-202ENST00000373093 PROSER2Q86WR7 435 aaPredicted RBP12.86□□□□□ -0.35
GRIK3-202ENST00000373093 TTC5Q8N0Z6 440 aa12.86□□□□□ -0.35
GRIK3-202ENST00000373093 STK11IPQ8N1F8 1099 aa12.86□□□□□ -0.35
GRIK3-202ENST00000373093 NPHP4O75161 1426 aaPredicted RBP12.86□□□□□ -0.35
GRIK3-202ENST00000373093 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
GRIK3-202ENST00000373093 PSMA5P28066 241 aa12.86□□□□□ -0.35
GRIK3-202ENST00000373093 UTP14CQ5TAP6 766 aaKnown RBP12.86□□□□□ -0.35
GRIK3-202ENST00000373093 LRRN4CLQ8ND94 238 aa12.86□□□□□ -0.35
GRIK3-202ENST00000373093 IL17RAQ96F46 866 aa12.86□□□□□ -0.35
GRIK3-202ENST00000373093 HOXB7P09629 217 aa12.85□□□□□ -0.35
GRIK3-202ENST00000373093 FKBP4Q02790 459 aaKnown RBP eCLIP12.85□□□□□ -0.35
GRIK3-202ENST00000373093 ELF2Q15723 593 aa12.85□□□□□ -0.35
GRIK3-202ENST00000373093 SLC52A2Q9HAB3 445 aa12.85□□□□□ -0.35
GRIK3-202ENST00000373093 CTNNA3Q9UI47 895 aa12.85□□□□□ -0.35
GRIK3-202ENST00000373093 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
GRIK3-202ENST00000373093 LRRC37A3O60309 1634 aa12.85□□□□□ -0.35
GRIK3-202ENST00000373093 CYP27B1O15528 508 aa12.85□□□□□ -0.35
GRIK3-202ENST00000373093 CTIFO43310 598 aaKnown RBP12.85□□□□□ -0.35
GRIK3-202ENST00000373093 RNF20Q5VTR2 975 aa12.85□□□□□ -0.35
GRIK3-202ENST00000373093 CEP135Q66GS9 1140 aa12.85□□□□□ -0.35
GRIK3-202ENST00000373093 SYNE4Q8N205 404 aa12.85□□□□□ -0.35
GRIK3-202ENST00000373093 METTL22Q9BUU2 404 aaPredicted RBP12.84□□□□□ -0.35
GRIK3-202ENST00000373093 DENND2AQ9ULE3 1009 aa12.84□□□□□ -0.35
GRIK3-202ENST00000373093 LTN1O94822 1766 aa12.84□□□□□ -0.35
GRIK3-202ENST00000373093 ZNF609O15014 1411 aa12.84□□□□□ -0.35
GRIK3-202ENST00000373093 GOLGA6L19H0YKK7 550 aa12.84□□□□□ -0.35
GRIK3-202ENST00000373093 BIN1O00499 593 aa12.84□□□□□ -0.35
GRIK3-202ENST00000373093 POLR3DP05423 398 aaPredicted RBP12.84□□□□□ -0.35
GRIK3-202ENST00000373093 SKILP12757 684 aa12.84□□□□□ -0.35
GRIK3-202ENST00000373093 TM6SF1Q9BZW5 370 aa12.84□□□□□ -0.35
GRIK3-202ENST00000373093 ADAMTSL3P82987 1691 aa12.84□□□□□ -0.35
GRIK3-202ENST00000373093 KMT5BQ4FZB7 885 aa12.84□□□□□ -0.35
GRIK3-202ENST00000373093 GTPBP4Q9BZE4 634 aaKnown RBP12.84□□□□□ -0.35
GRIK3-202ENST00000373093 TMX1Q9H3N1 280 aa12.84□□□□□ -0.35
GRIK3-202ENST00000373093 ERBB3P21860 1342 aa12.83□□□□□ -0.35
GRIK3-202ENST00000373093 NPHP3Q7Z494 1330 aa12.83□□□□□ -0.35
GRIK3-202ENST00000373093 MARF1Q9Y4F3 1742 aaKnown RBP12.83□□□□□ -0.36
GRIK3-202ENST00000373093 BECN2A8MW95 431 aa12.83□□□□□ -0.36
GRIK3-202ENST00000373093 PHKG2P15735 406 aa12.83□□□□□ -0.36
GRIK3-202ENST00000373093 RXRAP19793 462 aa12.83□□□□□ -0.36
GRIK3-202ENST00000373093 RFX5P48382 616 aaPredicted RBP12.83□□□□□ -0.36
GRIK3-202ENST00000373093 GOLPH3LQ9H4A5 285 aa12.83□□□□□ -0.36
GRIK3-202ENST00000373093 PLA2G4DQ86XP0 818 aa12.83□□□□□ -0.36
GRIK3-202ENST00000373093 UTRNP46939 3433 aa12.83□□□□□ -0.36
GRIK3-202ENST00000373093 CLSTN2Q9H4D0 955 aa12.82□□□□□ -0.36
GRIK3-202ENST00000373093 SMTNL1A8MU46 457 aa12.82□□□□□ -0.36
GRIK3-202ENST00000373093 CTDNEP1O95476 244 aa12.82□□□□□ -0.36
GRIK3-202ENST00000373093 TATP17735 454 aaPredicted RBP12.82□□□□□ -0.36
GRIK3-202ENST00000373093 CABP4P57796 275 aa12.82□□□□□ -0.36
GRIK3-202ENST00000373093 GTF3C6Q969F1 213 aa12.82□□□□□ -0.36
GRIK3-202ENST00000373093 USP28Q96RU2 1077 aa12.82□□□□□ -0.36
GRIK3-202ENST00000373093 CCDC69A6NI79 296 aa12.81□□□□□ -0.36
GRIK3-202ENST00000373093 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
GRIK3-202ENST00000373093 NBPF14Q5TI25 921 aa12.81□□□□□ -0.36
GRIK3-202ENST00000373093 NBPF10Q6P3W6 841 aaKnown RBP12.81□□□□□ -0.36
GRIK3-202ENST00000373093 LRRC8AQ8IWT6 810 aa12.81□□□□□ -0.36
GRIK3-202ENST00000373093 NBPF15Q8N660 670 aa12.81□□□□□ -0.36
GRIK3-202ENST00000373093 KCNB2Q92953 911 aa12.81□□□□□ -0.36
GRIK3-202ENST00000373093 ARHGAP23Q9P227 1491 aa12.81□□□□□ -0.36
GRIK3-202ENST00000373093 MED23Q9ULK4 1368 aa12.81□□□□□ -0.36
GRIK3-202ENST00000373093 ADORA1P30542 326 aa12.81□□□□□ -0.36
GRIK3-202ENST00000373093 GOLGA8FQ08AF8 430 aa12.81□□□□□ -0.36
GRIK3-202ENST00000373093 GOLGA8DPQ0D2H9 430 aa12.81□□□□□ -0.36
GRIK3-202ENST00000373093 HSP90AA4PQ58FG1 418 aa12.81□□□□□ -0.36
GRIK3-202ENST00000373093 FBXO38Q6PIJ6 1188 aa12.81□□□□□ -0.36
GRIK3-202ENST00000373093 CCAR1Q8IX12 1150 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms