RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 GPTP24298 496 aa22.32■■□□□ 1.16
USP49-202ENST00000373010 ANP32BQ92688 251 aaKnown RBP22.32■■□□□ 1.16
USP49-202ENST00000373010 MAP3K15Q6ZN16 1313 aa22.32■■□□□ 1.16
USP49-202ENST00000373010 COL14A1Q05707 1796 aaKnown RBP22.31■■□□□ 1.16
USP49-202ENST00000373010 ADORA1P30542 326 aa22.31■■□□□ 1.16
USP49-202ENST00000373010 DNM1Q05193 864 aaKnown RBP22.31■■□□□ 1.16
USP49-202ENST00000373010 ZBTB38Q8NAP3 1195 aaPredicted RBP22.31■■□□□ 1.16
USP49-202ENST00000373010 SYTL4Q96C24 671 aaPredicted RBP22.31■■□□□ 1.16
USP49-202ENST00000373010 ATP6V1DQ9Y5K8 247 aa22.31■■□□□ 1.16
USP49-202ENST00000373010 BCL9O00512 1426 aa22.31■■□□□ 1.16
USP49-202ENST00000373010 LARP1BQ659C4 914 aaKnown RBP22.3■■□□□ 1.16
USP49-202ENST00000373010 GIGYF2Q6Y7W6 1299 aaKnown RBP22.3■■□□□ 1.16
USP49-202ENST00000373010 SYAP1Q96A49 352 aaPredicted RBP22.3■■□□□ 1.16
USP49-202ENST00000373010 HELLSQ9NRZ9 838 aa22.3■■□□□ 1.16
USP49-202ENST00000373010 ZMYM1Q5SVZ6 1142 aa22.3■■□□□ 1.16
USP49-202ENST00000373010 CYP19A1P11511 503 aaPredicted RBP22.29■■□□□ 1.16
USP49-202ENST00000373010 STOX1Q6ZVD7 989 aa22.29■■□□□ 1.16
USP49-202ENST00000373010 PLA2G12BQ9BX93 195 aa22.29■■□□□ 1.16
USP49-202ENST00000373010 TAF7LQ5H9L4 462 aa22.29■■□□□ 1.16
USP49-202ENST00000373010 Q6ZUG5 572 aa22.29■■□□□ 1.16
USP49-202ENST00000373010 CSF1RP07333 972 aa22.28■■□□□ 1.16
USP49-202ENST00000373010 XAGE2Q96GT9 111 aa22.28■■□□□ 1.16
USP49-202ENST00000373010 ZBTB1Q9Y2K1 713 aa22.28■■□□□ 1.16
USP49-202ENST00000373010 ESPNB1AK53 854 aa22.28■■□□□ 1.16
USP49-202ENST00000373010 EXOC5O00471 708 aa22.28■■□□□ 1.16
USP49-202ENST00000373010 FKBP4Q02790 459 aaKnown RBP eCLIP22.28■■□□□ 1.16
USP49-202ENST00000373010 IFIT5Q13325 482 aaKnown RBP22.28■■□□□ 1.16
USP49-202ENST00000373010 CDC37L1Q7L3B6 337 aa22.28■■□□□ 1.16
USP49-202ENST00000373010 NLRP10Q86W26 655 aa22.28■■□□□ 1.16
USP49-202ENST00000373010 LRRC2Q9BYS8 371 aa22.28■■□□□ 1.16
USP49-202ENST00000373010 LAMA4Q16363 1823 aa22.27■■□□□ 1.16
USP49-202ENST00000373010 A0A0G2JLW4 131 aa22.27■■□□□ 1.16
USP49-202ENST00000373010 RNF113AO15541 343 aaKnown RBP22.27■■□□□ 1.16
USP49-202ENST00000373010 GORABQ5T7V8 394 aa22.27■■□□□ 1.16
USP49-202ENST00000373010 MAST3O60307 1309 aa22.27■■□□□ 1.16
USP49-202ENST00000373010 COL16A1Q07092 1604 aaPredicted RBP22.27■■□□□ 1.16
USP49-202ENST00000373010 ROBO1Q9Y6N7 1651 aa22.27■■□□□ 1.16
USP49-202ENST00000373010 FERMT3Q86UX7 667 aa22.27■■□□□ 1.16
USP49-202ENST00000373010 RNF214Q8ND24 703 aa22.27■■□□□ 1.16
USP49-202ENST00000373010 LRP6O75581 1613 aa22.26■■□□□ 1.15
USP49-202ENST00000373010 UBE2HP62256 183 aa22.26■■□□□ 1.15
USP49-202ENST00000373010 TTC39AQ5SRH9 613 aa22.26■■□□□ 1.15
USP49-202ENST00000373010 CCDC158Q5M9N0 1113 aa22.26■■□□□ 1.15
USP49-202ENST00000373010 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.26■■□□□ 1.15
USP49-202ENST00000373010 DSCC1Q9BVC3 393 aa22.26■■□□□ 1.15
USP49-202ENST00000373010 TSPY26PQ9H489 355 aa22.26■■□□□ 1.15
USP49-202ENST00000373010 AKAP2Q9Y2D5 859 aa22.26■■□□□ 1.15
USP49-202ENST00000373010 SPEF2Q9C093 1822 aa22.25■■□□□ 1.15
USP49-202ENST00000373010 M0R2C6 588 aa22.25■■□□□ 1.15
USP49-202ENST00000373010 FBXO3Q9UK99 471 aa22.25■■□□□ 1.15
USP49-202ENST00000373010 HSPD1P10809 573 aaKnown RBP22.25■■□□□ 1.15
USP49-202ENST00000373010 HSP90B1P14625 803 aaKnown RBP22.25■■□□□ 1.15
USP49-202ENST00000373010 SCARF1Q14162 830 aa22.25■■□□□ 1.15
USP49-202ENST00000373010 GREM2Q9H772 168 aa22.25■■□□□ 1.15
USP49-202ENST00000373010 CDHR2Q9BYE9 1310 aa22.24■■□□□ 1.15
USP49-202ENST00000373010 JAK2O60674 1132 aa22.24■■□□□ 1.15
USP49-202ENST00000373010 CLCN1P35523 988 aa22.24■■□□□ 1.15
USP49-202ENST00000373010 FAM173BQ6P4H8 233 aa22.24■■□□□ 1.15
USP49-202ENST00000373010 TTLL11Q8NHH1 800 aa22.24■■□□□ 1.15
USP49-202ENST00000373010 BRF1Q92994 677 aa22.24■■□□□ 1.15
USP49-202ENST00000373010 GTF3C6Q969F1 213 aa22.24■■□□□ 1.15
USP49-202ENST00000373010 PLCH1Q4KWH8 1693 aa22.24■■□□□ 1.15
USP49-202ENST00000373010 PDCP20941 246 aa22.23■■□□□ 1.15
USP49-202ENST00000373010 TBC1D2BQ9UPU7 963 aa22.23■■□□□ 1.15
USP49-202ENST00000373010 ANKRD36CQ5JPF3 1778 aa22.23■■□□□ 1.15
USP49-202ENST00000373010 RIC1Q4ADV7 1423 aa22.23■■□□□ 1.15
USP49-202ENST00000373010 ITGA6P23229 1130 aa22.23■■□□□ 1.15
USP49-202ENST00000373010 OSBP2Q969R2 916 aa22.23■■□□□ 1.15
USP49-202ENST00000373010 NUP98P52948 1817 aa22.23■■□□□ 1.15
USP49-202ENST00000373010 PHF14O94880 888 aa22.22■■□□□ 1.15
USP49-202ENST00000373010 CCDC183Q5T5S1 534 aa22.22■■□□□ 1.15
USP49-202ENST00000373010 FGD1P98174 961 aa22.22■■□□□ 1.15
USP49-202ENST00000373010 HSP90AB3PQ58FF7 597 aa22.22■■□□□ 1.15
USP49-202ENST00000373010 PI16Q6UXB8 463 aa22.22■■□□□ 1.15
USP49-202ENST00000373010 TICAM2Q86XR7 235 aa22.22■■□□□ 1.15
USP49-202ENST00000373010 RIPOR2Q9Y4F9 1068 aa22.22■■□□□ 1.15
USP49-202ENST00000373010 IRS4O14654 1257 aaPredicted RBP22.21■■□□□ 1.15
USP49-202ENST00000373010 ZAP70P43403 619 aa22.21■■□□□ 1.15
USP49-202ENST00000373010 CTSWP56202 376 aa22.21■■□□□ 1.15
USP49-202ENST00000373010 METTL24Q5JXM2 366 aa22.21■■□□□ 1.15
USP49-202ENST00000373010 LDHAL6AQ6ZMR3 332 aa22.21■■□□□ 1.15
USP49-202ENST00000373010 TRMT112Q9UI30 125 aaKnown RBP22.21■■□□□ 1.15
USP49-202ENST00000373010 WNK3Q9BYP7 1800 aa22.21■■□□□ 1.15
USP49-202ENST00000373010 DOT1LQ8TEK3 1739 aa22.21■■□□□ 1.15
USP49-202ENST00000373010 CSPP1Q1MSJ5 1256 aa22.21■■□□□ 1.15
USP49-202ENST00000373010 TTLL5Q6EMB2 1281 aa22.21■■□□□ 1.15
USP49-202ENST00000373010 DHX32Q7L7V1 743 aaKnown RBP22.21■■□□□ 1.15
USP49-202ENST00000373010 MYH3P11055 1940 aa22.21■■□□□ 1.15
USP49-202ENST00000373010 ATP2B3Q16720 1220 aa22.2■■□□□ 1.14
USP49-202ENST00000373010 DZIP3Q86Y13 1208 aaKnown RBP22.2■■□□□ 1.14
USP49-202ENST00000373010 PDLIM2Q96JY6 352 aa22.2■■□□□ 1.14
USP49-202ENST00000373010 COL22A1Q8NFW1 1626 aaPredicted RBP22.2■■□□□ 1.14
USP49-202ENST00000373010 A0A0G2JS52 829 aa22.2■■□□□ 1.14
USP49-202ENST00000373010 E7EWF7 191 aa22.2■■□□□ 1.14
USP49-202ENST00000373010 HMGB1P09429 215 aaKnown RBP22.19■■□□□ 1.14
USP49-202ENST00000373010 WASHC4Q2M389 1173 aa22.19■■□□□ 1.14
USP49-202ENST00000373010 ANKRD18BA2A2Z9 1011 aa22.19■■□□□ 1.14
USP49-202ENST00000373010 PDIA4P13667 645 aaKnown RBP22.19■■□□□ 1.14
USP49-202ENST00000373010 SCRN1Q12765 414 aa22.19■■□□□ 1.14
USP49-202ENST00000373010 TTC6Q86TZ1 520 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms