RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 CCZ1BP86790 482 aa12.28□□□□□ -0.44
TRERF1-203ENST00000372917 CCZ1P86791 482 aaPredicted RBP12.28□□□□□ -0.44
TRERF1-203ENST00000372917 NUP133Q8WUM0 1156 aa12.28□□□□□ -0.44
TRERF1-203ENST00000372917 MIS18AQ9NYP9 233 aa12.28□□□□□ -0.44
TRERF1-203ENST00000372917 SAMD9LQ8IVG5 1584 aa12.28□□□□□ -0.44
TRERF1-203ENST00000372917 KIAA0754O94854 1291 aa12.28□□□□□ -0.44
TRERF1-203ENST00000372917 HDXQ7Z353 690 aa12.28□□□□□ -0.44
TRERF1-203ENST00000372917 KIAA1328Q86T90 577 aa12.28□□□□□ -0.44
TRERF1-203ENST00000372917 NUTM1Q86Y26 1132 aa12.28□□□□□ -0.44
TRERF1-203ENST00000372917 MINK1Q8N4C8 1332 aaPredicted RBP12.28□□□□□ -0.44
TRERF1-203ENST00000372917 IQGAP3Q86VI3 1631 aa12.27□□□□□ -0.44
TRERF1-203ENST00000372917 BECN2A8MW95 431 aa12.27□□□□□ -0.44
TRERF1-203ENST00000372917 LRRFIP1Q32MZ4 808 aaKnown RBP12.27□□□□□ -0.44
TRERF1-203ENST00000372917 CEP85LQ5SZL2 805 aa12.27□□□□□ -0.44
TRERF1-203ENST00000372917 SLC4A10Q6U841 1118 aa12.27□□□□□ -0.44
TRERF1-203ENST00000372917 STK31Q9BXU1 1019 aa12.27□□□□□ -0.44
TRERF1-203ENST00000372917 ESF1Q9H501 851 aaKnown RBP12.27□□□□□ -0.44
TRERF1-203ENST00000372917 TMCO5BA8MYB1 307 aa12.27□□□□□ -0.45
TRERF1-203ENST00000372917 HMOX1P09601 288 aa12.27□□□□□ -0.45
TRERF1-203ENST00000372917 EZRP15311 586 aaKnown RBP12.27□□□□□ -0.45
TRERF1-203ENST00000372917 PROCA1Q8NCQ7 364 aaPredicted RBP12.27□□□□□ -0.45
TRERF1-203ENST00000372917 SSH1Q8WYL5 1049 aa12.27□□□□□ -0.45
TRERF1-203ENST00000372917 ABCA8O94911 1581 aa12.27□□□□□ -0.45
TRERF1-203ENST00000372917 E2F5Q15329 346 aa12.27□□□□□ -0.45
TRERF1-203ENST00000372917 TMX4Q9H1E5 349 aaPredicted RBP12.27□□□□□ -0.45
TRERF1-203ENST00000372917 MYO6Q9UM54 1294 aa12.27□□□□□ -0.45
TRERF1-203ENST00000372917 GSPT1P15170 499 aaKnown RBP12.26□□□□□ -0.45
TRERF1-203ENST00000372917 CDR1P51861 262 aa12.26□□□□□ -0.45
TRERF1-203ENST00000372917 HDGFL2Q7Z4V5 671 aaPredicted RBP12.26□□□□□ -0.45
TRERF1-203ENST00000372917 ARL10Q8N8L6 244 aa12.26□□□□□ -0.45
TRERF1-203ENST00000372917 GCC1Q96CN9 775 aa12.26□□□□□ -0.45
TRERF1-203ENST00000372917 RNF17Q9BXT8 1623 aaKnown RBP12.26□□□□□ -0.45
TRERF1-203ENST00000372917 SSBP05455 408 aaKnown RBP eCLIP12.26□□□□□ -0.45
TRERF1-203ENST00000372917 ATP6V1DQ9Y5K8 247 aa12.26□□□□□ -0.45
TRERF1-203ENST00000372917 PPP1R12BO60237 982 aaPredicted RBP12.26□□□□□ -0.45
TRERF1-203ENST00000372917 RTN2O75298 545 aa12.26□□□□□ -0.45
TRERF1-203ENST00000372917 OATP04181 439 aa12.26□□□□□ -0.45
TRERF1-203ENST00000372917 ETF1P62495 437 aaKnown RBP12.26□□□□□ -0.45
TRERF1-203ENST00000372917 DNM1Q05193 864 aaKnown RBP12.26□□□□□ -0.45
TRERF1-203ENST00000372917 PPP2R3AQ06190 1150 aa12.26□□□□□ -0.45
TRERF1-203ENST00000372917 KCNB1Q14721 858 aa12.26□□□□□ -0.45
TRERF1-203ENST00000372917 AFAP1L1Q8TED9 768 aa12.26□□□□□ -0.45
TRERF1-203ENST00000372917 SCLT1Q96NL6 688 aa12.26□□□□□ -0.45
TRERF1-203ENST00000372917 DTNBO60941 627 aa12.25□□□□□ -0.45
TRERF1-203ENST00000372917 FAM163BP0C2L3 166 aa12.25□□□□□ -0.45
TRERF1-203ENST00000372917 ICA1Q05084 483 aa12.25□□□□□ -0.45
TRERF1-203ENST00000372917 ZRSR2Q15696 482 aaKnown RBP12.25□□□□□ -0.45
TRERF1-203ENST00000372917 UPF3BQ9BZI7 483 aaKnown RBP12.25□□□□□ -0.45
TRERF1-203ENST00000372917 PAX3P23760 479 aa12.25□□□□□ -0.45
TRERF1-203ENST00000372917 THEMIS2Q5TEJ8 643 aa12.25□□□□□ -0.45
TRERF1-203ENST00000372917 E4F1Q66K89 784 aaPredicted RBP12.25□□□□□ -0.45
TRERF1-203ENST00000372917 TMEM87AQ8NBN3 555 aa12.25□□□□□ -0.45
TRERF1-203ENST00000372917 MAF1Q9H063 256 aa12.25□□□□□ -0.45
TRERF1-203ENST00000372917 DRAXINQ8NBI3 349 aaPredicted RBP12.25□□□□□ -0.45
TRERF1-203ENST00000372917 ZBTB40Q9NUA8 1239 aa12.25□□□□□ -0.45
TRERF1-203ENST00000372917 TTC37Q6PGP7 1564 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 CDKL5O76039 1030 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 KIF4AO95239 1232 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 ZSCAN22P10073 491 aaPredicted RBP12.24□□□□□ -0.45
TRERF1-203ENST00000372917 MRPL12P52815 198 aaKnown RBP12.24□□□□□ -0.45
TRERF1-203ENST00000372917 CEP112Q8N8E3 955 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 SMARCC1Q92922 1105 aaPredicted RBP12.24□□□□□ -0.45
TRERF1-203ENST00000372917 SUGCTQ9HAC7 445 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 SAMM50Q9Y512 469 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 SHTN1A0MZ66 631 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 NUTM2FA1L443 756 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 TDRD7Q8NHU6 1098 aaKnown RBP12.24□□□□□ -0.45
TRERF1-203ENST00000372917 FBXW7Q969H0 707 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 LMCD1Q9NZU5 365 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 EIF2S2P20042 333 aaKnown RBP12.24□□□□□ -0.45
TRERF1-203ENST00000372917 RAB27AP51159 221 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 DDR1Q08345 913 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 TSHZ1Q6ZSZ6 1077 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 TCHHQ07283 1943 aa12.24□□□□□ -0.45
TRERF1-203ENST00000372917 MADDQ8WXG6 1647 aa12.23□□□□□ -0.45
TRERF1-203ENST00000372917 PRPHP41219 470 aa12.23□□□□□ -0.45
TRERF1-203ENST00000372917 IQGAP1P46940 1657 aa12.23□□□□□ -0.45
TRERF1-203ENST00000372917 ERLIN1O75477 346 aa12.23□□□□□ -0.45
TRERF1-203ENST00000372917 PYGBP11216 843 aa12.23□□□□□ -0.45
TRERF1-203ENST00000372917 FAM71BQ8TC56 605 aa12.23□□□□□ -0.45
TRERF1-203ENST00000372917 YIPF3Q9GZM5 350 aa12.23□□□□□ -0.45
TRERF1-203ENST00000372917 PREX2Q70Z35 1606 aa12.23□□□□□ -0.45
TRERF1-203ENST00000372917 CCDC151A5D8V7 595 aa12.23□□□□□ -0.45
TRERF1-203ENST00000372917 PES1O00541 588 aaKnown RBP12.23□□□□□ -0.45
TRERF1-203ENST00000372917 TPP2P29144 1249 aaPredicted RBP12.23□□□□□ -0.45
TRERF1-203ENST00000372917 LAMB3Q13751 1172 aa12.23□□□□□ -0.45
TRERF1-203ENST00000372917 SLC5A9Q2M3M2 681 aa12.23□□□□□ -0.45
TRERF1-203ENST00000372917 GOLGA1Q92805 767 aa12.23□□□□□ -0.45
TRERF1-203ENST00000372917 ZNF396Q96N95 335 aaPredicted RBP12.23□□□□□ -0.45
TRERF1-203ENST00000372917 DACT1Q9NYF0 836 aa12.23□□□□□ -0.45
TRERF1-203ENST00000372917 DIAPH1O60610 1272 aaKnown RBP12.22□□□□□ -0.45
TRERF1-203ENST00000372917 INTS4Q96HW7 963 aaKnown RBP12.22□□□□□ -0.45
TRERF1-203ENST00000372917 PHF23Q9BUL5 403 aaPredicted RBP12.22□□□□□ -0.45
TRERF1-203ENST00000372917 BCAS4Q8TDM0 211 aa12.22□□□□□ -0.45
TRERF1-203ENST00000372917 NAT10Q9H0A0 1025 aaKnown RBP12.22□□□□□ -0.45
TRERF1-203ENST00000372917 EVC2Q86UK5 1308 aa12.22□□□□□ -0.45
TRERF1-203ENST00000372917 VPS37CA5D8V6 355 aaPredicted RBP12.22□□□□□ -0.45
TRERF1-203ENST00000372917 MAP2K7O14733 419 aa12.22□□□□□ -0.45
TRERF1-203ENST00000372917 SFPQP23246 707 aaKnown RBP eCLIP12.22□□□□□ -0.45
TRERF1-203ENST00000372917 TMPOP42166 694 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms