RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 ADGRL3Q9HAR2 1447 aa18.54■□□□□ 0.56
PABPC4-202ENST00000372857 C9orf78Q9NZ63 289 aaPredicted RBP18.54■□□□□ 0.56
PABPC4-202ENST00000372857 SLFNL1Q499Z3 407 aa18.53■□□□□ 0.56
PABPC4-202ENST00000372857 EAF2Q96CJ1 260 aaPredicted RBP18.53■□□□□ 0.56
PABPC4-202ENST00000372857 EDC3Q96F86 508 aaKnown RBP18.53■□□□□ 0.56
PABPC4-202ENST00000372857 CFAP45Q9UL16 551 aa18.53■□□□□ 0.56
PABPC4-202ENST00000372857 PIP4K2AP48426 406 aaPredicted RBP18.53■□□□□ 0.56
PABPC4-202ENST00000372857 ZC3H6P61129 1189 aaKnown RBP18.53■□□□□ 0.56
PABPC4-202ENST00000372857 TEFQ10587 303 aa18.53■□□□□ 0.56
PABPC4-202ENST00000372857 FMN2Q9NZ56 1722 aa18.53■□□□□ 0.56
PABPC4-202ENST00000372857 CLCN6P51797 869 aa18.52■□□□□ 0.56
PABPC4-202ENST00000372857 PROSER3Q2NL68 480 aa18.52■□□□□ 0.56
PABPC4-202ENST00000372857 E4F1Q66K89 784 aaPredicted RBP18.52■□□□□ 0.56
PABPC4-202ENST00000372857 SIL1Q9H173 461 aa18.52■□□□□ 0.56
PABPC4-202ENST00000372857 BMS1Q14692 1282 aaKnown RBP18.52■□□□□ 0.56
PABPC4-202ENST00000372857 CCDC73Q6ZRK6 1079 aa18.52■□□□□ 0.55
PABPC4-202ENST00000372857 NBPF11Q86T75 865 aa18.52■□□□□ 0.55
PABPC4-202ENST00000372857 CALCOCO1Q9P1Z2 691 aa18.52■□□□□ 0.55
PABPC4-202ENST00000372857 KINO60870 393 aaKnown RBP18.51■□□□□ 0.55
PABPC4-202ENST00000372857 FHOD1Q9Y613 1164 aa18.51■□□□□ 0.55
PABPC4-202ENST00000372857 NALCNQ8IZF0 1738 aa18.51■□□□□ 0.55
PABPC4-202ENST00000372857 BTBD11A6QL63 1104 aa18.51■□□□□ 0.55
PABPC4-202ENST00000372857 H2AFXP16104 143 aaPredicted RBP18.51■□□□□ 0.55
PABPC4-202ENST00000372857 CWF19L2Q2TBE0 894 aaKnown RBP18.51■□□□□ 0.55
PABPC4-202ENST00000372857 Q6ZUG5 572 aa18.51■□□□□ 0.55
PABPC4-202ENST00000372857 PPP1R13BQ96KQ4 1090 aa18.51■□□□□ 0.55
PABPC4-202ENST00000372857 LRRC37A3O60309 1634 aa18.51■□□□□ 0.55
PABPC4-202ENST00000372857 HIP1O00291 1037 aa18.5■□□□□ 0.55
PABPC4-202ENST00000372857 GIGYF1O75420 1035 aaPredicted RBP18.5■□□□□ 0.55
PABPC4-202ENST00000372857 SASH1O94885 1247 aa18.5■□□□□ 0.55
PABPC4-202ENST00000372857 ARHGAP29Q52LW3 1261 aa18.5■□□□□ 0.55
PABPC4-202ENST00000372857 ANO10Q9NW15 660 aa18.5■□□□□ 0.55
PABPC4-202ENST00000372857 SMC2O95347 1197 aa18.5■□□□□ 0.55
PABPC4-202ENST00000372857 CEP57L1Q8IYX8 460 aa18.5■□□□□ 0.55
PABPC4-202ENST00000372857 CTAGE5O15320 804 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 CHGBP05060 677 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 ADD1P35611 737 aaKnown RBP18.49■□□□□ 0.55
PABPC4-202ENST00000372857 TMC6Q7Z403 805 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 USP28Q96RU2 1077 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 POLR3GO15318 223 aaPredicted RBP18.49■□□□□ 0.55
PABPC4-202ENST00000372857 CAPN2P17655 700 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 GUCY1B3Q02153 619 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 ERC1Q8IUD2 1116 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 FSIP1Q8NA03 581 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 ZSCAN16Q9H4T2 348 aaPredicted RBP18.49■□□□□ 0.55
PABPC4-202ENST00000372857 PIK3C2AO00443 1686 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 PNMA6AP0CW24 399 aaPredicted RBP18.49■□□□□ 0.55
PABPC4-202ENST00000372857 ME1P48163 572 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 HNRNPH2P55795 449 aaKnown RBP18.49■□□□□ 0.55
PABPC4-202ENST00000372857 SLC39A6Q13433 755 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 FMNL2Q96PY5 1086 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 MAP3K2Q9Y2U5 619 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 NDUFB9Q9Y6M9 179 aa18.49■□□□□ 0.55
PABPC4-202ENST00000372857 CYP2C19P33261 490 aa18.48■□□□□ 0.55
PABPC4-202ENST00000372857 EIF4A1P60842 406 aaKnown RBP18.48■□□□□ 0.55
PABPC4-202ENST00000372857 SCRN1Q12765 414 aa18.48■□□□□ 0.55
PABPC4-202ENST00000372857 ANKLE2Q86XL3 938 aa18.48■□□□□ 0.55
PABPC4-202ENST00000372857 NEK1Q96PY6 1258 aa18.48■□□□□ 0.55
PABPC4-202ENST00000372857 AXIN2Q9Y2T1 843 aa18.48■□□□□ 0.55
PABPC4-202ENST00000372857 KIF2AO00139 706 aaPredicted RBP18.48■□□□□ 0.55
PABPC4-202ENST00000372857 GSDMDP57764 484 aa18.48■□□□□ 0.55
PABPC4-202ENST00000372857 MTX1Q13505 466 aa18.48■□□□□ 0.55
PABPC4-202ENST00000372857 ARMCX5Q6P1M9 558 aa18.48■□□□□ 0.55
PABPC4-202ENST00000372857 KLHDC4Q8TBB5 520 aa18.48■□□□□ 0.55
PABPC4-202ENST00000372857 L2HGDHQ9H9P8 463 aa18.48■□□□□ 0.55
PABPC4-202ENST00000372857 PLA2G4AP47712 749 aa18.47■□□□□ 0.55
PABPC4-202ENST00000372857 G3BP1Q13283 466 aaKnown RBP eCLIP18.47■□□□□ 0.554e-7■□□□□ 10.4
PABPC4-202ENST00000372857 CCDC129Q6ZRS4 1044 aa18.47■□□□□ 0.55
PABPC4-202ENST00000372857 HOMER1Q86YM7 354 aa18.47■□□□□ 0.55
PABPC4-202ENST00000372857 IP6K1Q92551 441 aa18.47■□□□□ 0.55
PABPC4-202ENST00000372857 XPO4Q9C0E2 1151 aaKnown RBP18.47■□□□□ 0.55
PABPC4-202ENST00000372857 IFNKQ9P0W0 207 aa18.47■□□□□ 0.55
PABPC4-202ENST00000372857 MED23Q9ULK4 1368 aa18.47■□□□□ 0.55
PABPC4-202ENST00000372857 TAF5LO75529 589 aa18.47■□□□□ 0.55
PABPC4-202ENST00000372857 ALDH8A1Q9H2A2 487 aaPredicted RBP18.47■□□□□ 0.55
PABPC4-202ENST00000372857 RCOR1Q9UKL0 485 aa18.47■□□□□ 0.55
PABPC4-202ENST00000372857 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.47■□□□□ 0.559e-11■■□□□ 12.7
PABPC4-202ENST00000372857 TOPAZ1Q8N9V7 1692 aa18.47■□□□□ 0.55
PABPC4-202ENST00000372857 SDF4Q9BRK5 362 aa18.47■□□□□ 0.55
PABPC4-202ENST00000372857 FAM160A1Q05DH4 1040 aa18.46■□□□□ 0.55
PABPC4-202ENST00000372857 SEC62Q99442 399 aaKnown RBP18.46■□□□□ 0.55
PABPC4-202ENST00000372857 HMG20BQ9P0W2 317 aa18.46■□□□□ 0.55
PABPC4-202ENST00000372857 GCP02774 474 aa18.46■□□□□ 0.55
PABPC4-202ENST00000372857 ENGASEQ8NFI3 743 aa18.46■□□□□ 0.55
PABPC4-202ENST00000372857 NEK11Q8NG66 645 aa18.46■□□□□ 0.55
PABPC4-202ENST00000372857 BIN1O00499 593 aa18.45■□□□□ 0.54
PABPC4-202ENST00000372857 SFPQP23246 707 aaKnown RBP eCLIP18.45■□□□□ 0.54
PABPC4-202ENST00000372857 DPCR1Q3MIW9 517 aa18.45■□□□□ 0.54
PABPC4-202ENST00000372857 CCDC93Q567U6 631 aa18.45■□□□□ 0.54
PABPC4-202ENST00000372857 CABLES1Q8TDN4 633 aa18.45■□□□□ 0.54
PABPC4-202ENST00000372857 OSBPL5Q9H0X9 879 aaPredicted RBP18.45■□□□□ 0.54
PABPC4-202ENST00000372857 DNAI1Q9UI46 699 aa18.45■□□□□ 0.54
PABPC4-202ENST00000372857 A0A1B0GVL5 298 aa18.45■□□□□ 0.54
PABPC4-202ENST00000372857 SEC31AO94979 1220 aaKnown RBP18.45■□□□□ 0.54
PABPC4-202ENST00000372857 CCT2P78371 535 aaKnown RBP18.45■□□□□ 0.54
PABPC4-202ENST00000372857 SUCLG2Q96I99 432 aa18.45■□□□□ 0.54
PABPC4-202ENST00000372857 COL15A1P39059 1388 aa18.45■□□□□ 0.54
PABPC4-202ENST00000372857 DHX37Q8IY37 1157 aaKnown RBP18.44■□□□□ 0.54
PABPC4-202ENST00000372857 NAT10Q9H0A0 1025 aaKnown RBP18.44■□□□□ 0.54
PABPC4-202ENST00000372857 BICC1Q9H694 974 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms