RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 EPHA10Q5JZY3 1008 aa18.85■□□□□ 0.61
SNX21-203ENST00000372541 INTS3Q68E01 1043 aaKnown RBP18.85■□□□□ 0.61
SNX21-203ENST00000372541 CLUAP1Q96AJ1 413 aa18.85■□□□□ 0.61
SNX21-203ENST00000372541 BSDC1Q9NW68 430 aaPredicted RBP18.85■□□□□ 0.61
SNX21-203ENST00000372541 NSFL1CQ9UNZ2 370 aaKnown RBP18.85■□□□□ 0.61
SNX21-203ENST00000372541 DUOX1Q9NRD9 1551 aa18.85■□□□□ 0.61
SNX21-203ENST00000372541 UBTFL1P0CB47 393 aaPredicted RBP18.84■□□□□ 0.61
SNX21-203ENST00000372541 GPSM2P81274 684 aa18.84■□□□□ 0.61
SNX21-203ENST00000372541 FTSJ3Q8IY81 847 aaKnown RBP18.84■□□□□ 0.61
SNX21-203ENST00000372541 LARGE2Q8N3Y3 721 aa18.84■□□□□ 0.61
SNX21-203ENST00000372541 JDP2Q8WYK2 163 aa18.84■□□□□ 0.61
SNX21-203ENST00000372541 BICC1Q9H694 974 aaKnown RBP18.84■□□□□ 0.61
SNX21-203ENST00000372541 ANKIB1Q9P2G1 1089 aa18.84■□□□□ 0.61
SNX21-203ENST00000372541 PPIP5K2O43314 1243 aa18.83■□□□□ 0.6
SNX21-203ENST00000372541 DDNO94850 711 aaPredicted RBP18.83■□□□□ 0.6
SNX21-203ENST00000372541 POTEIP0CG38 1075 aa18.83■□□□□ 0.6
SNX21-203ENST00000372541 POTEJP0CG39 1038 aa18.83■□□□□ 0.6
SNX21-203ENST00000372541 CCDC57Q2TAC2 916 aa18.83■□□□□ 0.6
SNX21-203ENST00000372541 KAZALD1Q96I82 304 aa18.83■□□□□ 0.6
SNX21-203ENST00000372541 MPHOSPH8Q99549 860 aa18.83■□□□□ 0.6
SNX21-203ENST00000372541 VPS33BQ9H267 617 aa18.83■□□□□ 0.6
SNX21-203ENST00000372541 MKRN1Q9UHC7 482 aaKnown RBP18.83■□□□□ 0.6
SNX21-203ENST00000372541 TNNQ9UQP3 1299 aa18.83■□□□□ 0.6
SNX21-203ENST00000372541 DICER1Q9UPY3 1922 aaKnown RBP18.82■□□□□ 0.6
SNX21-203ENST00000372541 CCDC88AQ3V6T2 1871 aa18.82■□□□□ 0.6
SNX21-203ENST00000372541 XDHP47989 1333 aa18.82■□□□□ 0.6
SNX21-203ENST00000372541 AOC3Q16853 763 aa18.82■□□□□ 0.6
SNX21-203ENST00000372541 TAF7LQ5H9L4 462 aa18.82■□□□□ 0.6
SNX21-203ENST00000372541 PODXL2Q9NZ53 605 aa18.82■□□□□ 0.6
SNX21-203ENST00000372541 RCAN3Q9UKA8 241 aa18.82■□□□□ 0.6
SNX21-203ENST00000372541 HDAC5Q9UQL6 1122 aa18.82■□□□□ 0.6
SNX21-203ENST00000372541 LTBP1Q14766 1721 aa18.82■□□□□ 0.6
SNX21-203ENST00000372541 C6orf229H3BNL8 230 aa18.81■□□□□ 0.6
SNX21-203ENST00000372541 KIAA2012Q0VF49 1180 aa18.81■□□□□ 0.6
SNX21-203ENST00000372541 RABL6Q3YEC7 729 aaPredicted RBP18.81■□□□□ 0.6
SNX21-203ENST00000372541 ANKRD44Q8N8A2 993 aa18.81■□□□□ 0.6
SNX21-203ENST00000372541 EYA3Q99504 573 aa18.81■□□□□ 0.6
SNX21-203ENST00000372541 SPEF2Q9C093 1822 aa18.81■□□□□ 0.6
SNX21-203ENST00000372541 PASKQ96RG2 1323 aa18.8■□□□□ 0.6
SNX21-203ENST00000372541 COL4A5P29400 1685 aa18.8■□□□□ 0.6
SNX21-203ENST00000372541 UFL1O94874 794 aa18.8■□□□□ 0.6
SNX21-203ENST00000372541 GNAI3P08754 354 aa18.8■□□□□ 0.6
SNX21-203ENST00000372541 NIM1KQ8IY84 436 aa18.8■□□□□ 0.6
SNX21-203ENST00000372541 DZIP1LQ8IYY4 767 aaKnown RBP18.8■□□□□ 0.6
SNX21-203ENST00000372541 MEIS3Q99687 375 aa18.8■□□□□ 0.6
SNX21-203ENST00000372541 GGA1Q9UJY5 639 aa18.8■□□□□ 0.6
SNX21-203ENST00000372541 MINPP1Q9UNW1 487 aa18.8■□□□□ 0.6
SNX21-203ENST00000372541 FOXN1O15353 648 aa18.79■□□□□ 0.6
SNX21-203ENST00000372541 WASHC4Q2M389 1173 aa18.79■□□□□ 0.6
SNX21-203ENST00000372541 TMEM57Q8N5G2 664 aa18.79■□□□□ 0.6
SNX21-203ENST00000372541 TBC1D16Q8TBP0 767 aa18.79■□□□□ 0.6
SNX21-203ENST00000372541 PRDM10Q9NQV6 1147 aa18.79■□□□□ 0.6
SNX21-203ENST00000372541 POLLQ9UGP5 575 aa18.79■□□□□ 0.6
SNX21-203ENST00000372541 CNTNAP1P78357 1384 aa18.79■□□□□ 0.6
SNX21-203ENST00000372541 FZD9O00144 591 aa18.78■□□□□ 0.6
SNX21-203ENST00000372541 L3MBTL3Q96JM7 780 aaPredicted RBP18.78■□□□□ 0.6
SNX21-203ENST00000372541 ANKRD2Q9GZV1 360 aa18.78■□□□□ 0.6
SNX21-203ENST00000372541 ZNF541Q9H0D2 1346 aa18.77■□□□□ 0.6
SNX21-203ENST00000372541 IQCA1LA6NCM1 817 aa18.77■□□□□ 0.6
SNX21-203ENST00000372541 ATP2B4P23634 1241 aa18.77■□□□□ 0.6
SNX21-203ENST00000372541 EIF6P56537 245 aaKnown RBP18.77■□□□□ 0.6
SNX21-203ENST00000372541 LDHAL6AQ6ZMR3 332 aa18.77■□□□□ 0.6
SNX21-203ENST00000372541 LDHDQ86WU2 507 aa18.77■□□□□ 0.6
SNX21-203ENST00000372541 ITPRIPQ8IWB1 547 aa18.77■□□□□ 0.6
SNX21-203ENST00000372541 ZNF594Q96JF6 807 aaPredicted RBP18.77■□□□□ 0.6
SNX21-203ENST00000372541 LRRFIP2Q9Y608 721 aaKnown RBP18.77■□□□□ 0.6
SNX21-203ENST00000372541 ITGBL1O95965 494 aaPredicted RBP18.76■□□□□ 0.59
SNX21-203ENST00000372541 MS4A1P11836 297 aa18.76■□□□□ 0.59
SNX21-203ENST00000372541 CHRNDQ07001 517 aa18.76■□□□□ 0.59
SNX21-203ENST00000372541 GPR101Q96P66 508 aaPredicted RBP18.76■□□□□ 0.59
SNX21-203ENST00000372541 ZC3H12CQ9C0D7 883 aaKnown RBP18.76■□□□□ 0.59
SNX21-203ENST00000372541 TAF1DQ9H5J8 278 aaPredicted RBP18.76■□□□□ 0.59
SNX21-203ENST00000372541 CNNM1Q9NRU3 951 aa18.76■□□□□ 0.59
SNX21-203ENST00000372541 RIMBP2O15034 1052 aa18.75■□□□□ 0.59
SNX21-203ENST00000372541 RLBP1P12271 317 aa18.75■□□□□ 0.59
SNX21-203ENST00000372541 ZNRF3Q9ULT6 936 aa18.75■□□□□ 0.59
SNX21-203ENST00000372541 MED23Q9ULK4 1368 aa18.74■□□□□ 0.59
SNX21-203ENST00000372541 KCNJ4P48050 445 aa18.74■□□□□ 0.59
SNX21-203ENST00000372541 VEGFBP49765 207 aa18.74■□□□□ 0.59
SNX21-203ENST00000372541 GPC2Q8N158 579 aa18.74■□□□□ 0.59
SNX21-203ENST00000372541 LEMD3Q9Y2U8 911 aa18.74■□□□□ 0.59
SNX21-203ENST00000372541 TMEM88BA6NKF7 163 aa18.73■□□□□ 0.59
SNX21-203ENST00000372541 GNAI2P04899 355 aa18.73■□□□□ 0.59
SNX21-203ENST00000372541 CTCFP49711 727 aaPredicted RBP18.73■□□□□ 0.59
SNX21-203ENST00000372541 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.73■□□□□ 0.59
SNX21-203ENST00000372541 DBNDD1Q9H9R9 158 aa18.73■□□□□ 0.59
SNX21-203ENST00000372541 ZNF804BA4D1E1 1349 aa18.73■□□□□ 0.59
SNX21-203ENST00000372541 G3V3G9 751 aa18.72■□□□□ 0.59
SNX21-203ENST00000372541 ECE2O60344 883 aa18.72■□□□□ 0.59
SNX21-203ENST00000372541 DCAF8Q5TAQ9 597 aa18.72■□□□□ 0.59
SNX21-203ENST00000372541 PANK1Q8TE04 598 aa18.72■□□□□ 0.59
SNX21-203ENST00000372541 WBP1LQ9NX94 342 aa18.72■□□□□ 0.59
SNX21-203ENST00000372541 GJA3Q9Y6H8 435 aa18.72■□□□□ 0.59
SNX21-203ENST00000372541 PLIN1O60240 522 aa18.71■□□□□ 0.59
SNX21-203ENST00000372541 TAF5LO75529 589 aa18.71■□□□□ 0.59
SNX21-203ENST00000372541 DOK7Q18PE1 504 aa18.71■□□□□ 0.59
SNX21-203ENST00000372541 HELBQ8NG08 1087 aaPredicted RBP18.71■□□□□ 0.59
SNX21-203ENST00000372541 KLHDC4Q8TBB5 520 aa18.71■□□□□ 0.59
SNX21-203ENST00000372541 PUS3Q9BZE2 481 aaKnown RBP18.71■□□□□ 0.59
SNX21-203ENST00000372541 MROH5Q6ZUA9 1318 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms