RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 JARID2Q92833 1246 aaPredicted RBP21.45■■□□□ 1.02
CD40-201ENST00000372276 NEUROD6Q96NK8 337 aa21.45■■□□□ 1.02
CD40-201ENST00000372276 ZNF609O15014 1411 aa21.45■■□□□ 1.02
CD40-201ENST00000372276 SCAND2PQ9GZW5 306 aaPredicted RBP21.44■■□□□ 1.02
CD40-201ENST00000372276 CCDC39Q9UFE4 941 aa21.44■■□□□ 1.02
CD40-201ENST00000372276 GADD45BO75293 160 aaPredicted RBP21.44■■□□□ 1.02
CD40-201ENST00000372276 TOB2Q14106 344 aaPredicted RBP21.44■■□□□ 1.02
CD40-201ENST00000372276 CCDC158Q5M9N0 1113 aa21.44■■□□□ 1.02
CD40-201ENST00000372276 ZMYM1Q5SVZ6 1142 aa21.44■■□□□ 1.02
CD40-201ENST00000372276 ZBTB3Q9H5J0 574 aa21.44■■□□□ 1.02
CD40-201ENST00000372276 VPS37CA5D8V6 355 aaPredicted RBP21.43■■□□□ 1.02
CD40-201ENST00000372276 IFIT1P09914 478 aaKnown RBP21.43■■□□□ 1.02
CD40-201ENST00000372276 CHAMP1Q96JM3 812 aa21.43■■□□□ 1.02
CD40-201ENST00000372276 RNF113AO15541 343 aaKnown RBP21.42■■□□□ 1.02
CD40-201ENST00000372276 ST3GAL1Q11201 340 aa21.42■■□□□ 1.02
CD40-201ENST00000372276 GTF3C6Q969F1 213 aa21.42■■□□□ 1.02
CD40-201ENST00000372276 LARP6Q9BRS8 491 aaKnown RBP21.42■■□□□ 1.02
CD40-201ENST00000372276 STRN4Q9NRL3 753 aa21.42■■□□□ 1.02
CD40-201ENST00000372276 CTNNA3Q9UI47 895 aa21.42■■□□□ 1.02
CD40-201ENST00000372276 CDHR2Q9BYE9 1310 aa21.42■■□□□ 1.02
CD40-201ENST00000372276 DDX46Q7L014 1031 aaKnown RBP21.41■■□□□ 1.02
CD40-201ENST00000372276 DHX32Q7L7V1 743 aaKnown RBP21.41■■□□□ 1.02
CD40-201ENST00000372276 NECAB1Q8N987 351 aa21.41■■□□□ 1.02
CD40-201ENST00000372276 ZBTB38Q8NAP3 1195 aaPredicted RBP21.41■■□□□ 1.02
CD40-201ENST00000372276 GDPD2Q9HCC8 539 aa21.41■■□□□ 1.02
CD40-201ENST00000372276 NOL7Q9UMY1 257 aaKnown RBP21.41■■□□□ 1.02
CD40-201ENST00000372276 SPATA31A6Q5VVP1 1343 aa21.41■■□□□ 1.02
CD40-201ENST00000372276 LRP6O75581 1613 aa21.41■■□□□ 1.02
CD40-201ENST00000372276 CSF1RP07333 972 aa21.4■■□□□ 1.02
CD40-201ENST00000372276 EDC3Q96F86 508 aaKnown RBP21.4■■□□□ 1.02
CD40-201ENST00000372276 ZSCAN16Q9H4T2 348 aaPredicted RBP21.4■■□□□ 1.02
CD40-201ENST00000372276 A0A1B0GUL7 405 aa21.4■■□□□ 1.02
CD40-201ENST00000372276 GOLIM4O00461 696 aa21.4■■□□□ 1.02
CD40-201ENST00000372276 FIBPO43427 364 aa21.4■■□□□ 1.02
CD40-201ENST00000372276 HMGN5P82970 282 aaKnown RBP21.4■■□□□ 1.02
CD40-201ENST00000372276 DNM1Q05193 864 aaKnown RBP21.4■■□□□ 1.02
CD40-201ENST00000372276 CYP21A2P08686 494 aa21.39■■□□□ 1.01
CD40-201ENST00000372276 FOXD4L6Q3SYB3 417 aaPredicted RBP21.39■■□□□ 1.01
CD40-201ENST00000372276 FOXD4L3Q6VB84 417 aaPredicted RBP21.39■■□□□ 1.01
CD40-201ENST00000372276 FBXL16Q8N461 479 aa21.39■■□□□ 1.01
CD40-201ENST00000372276 MAP3K15Q6ZN16 1313 aa21.38■■□□□ 1.01
CD40-201ENST00000372276 TIMM10P62072 90 aa21.38■■□□□ 1.01
CD40-201ENST00000372276 FGD1P98174 961 aa21.38■■□□□ 1.01
CD40-201ENST00000372276 IFIT5Q13325 482 aaKnown RBP21.38■■□□□ 1.01
CD40-201ENST00000372276 GORABQ5T7V8 394 aa21.38■■□□□ 1.01
CD40-201ENST00000372276 GIGYF2Q6Y7W6 1299 aaKnown RBP21.38■■□□□ 1.01
CD40-201ENST00000372276 Q6ZUG5 572 aa21.38■■□□□ 1.01
CD40-201ENST00000372276 TAF7LQ5H9L4 462 aa21.37■■□□□ 1.01
CD40-201ENST00000372276 ATL3Q6DD88 541 aa21.37■■□□□ 1.01
CD40-201ENST00000372276 AGXT2Q9BYV1 514 aa21.37■■□□□ 1.01
CD40-201ENST00000372276 TOGARAM1Q9Y4F4 1720 aa21.37■■□□□ 1.01
CD40-201ENST00000372276 COL14A1Q05707 1796 aaKnown RBP21.37■■□□□ 1.01
CD40-201ENST00000372276 PFKFB2O60825 505 aa21.37■■□□□ 1.01
CD40-201ENST00000372276 TTC39AQ5SRH9 613 aa21.37■■□□□ 1.01
CD40-201ENST00000372276 ZSCAN25Q6NSZ9 544 aa21.37■■□□□ 1.01
CD40-201ENST00000372276 ZNF512BQ96KM6 892 aaPredicted RBP21.37■■□□□ 1.01
CD40-201ENST00000372276 HSP90B1P14625 803 aaKnown RBP21.36■■□□□ 1.01
CD40-201ENST00000372276 LRRC24Q50LG9 513 aa21.36■■□□□ 1.01
CD40-201ENST00000372276 PIGBQ92521 554 aa21.36■■□□□ 1.01
CD40-201ENST00000372276 AK7Q96M32 723 aa21.36■■□□□ 1.01
CD40-201ENST00000372276 CFAP45Q9UL16 551 aa21.36■■□□□ 1.01
CD40-201ENST00000372276 COL22A1Q8NFW1 1626 aaPredicted RBP21.36■■□□□ 1.01
CD40-201ENST00000372276 GOLGA6L4A6NEF3 574 aa21.35■■□□□ 1.01
CD40-201ENST00000372276 ZNF500O60304 480 aaPredicted RBP21.35■■□□□ 1.01
CD40-201ENST00000372276 SMARCC2Q8TAQ2 1214 aa21.35■■□□□ 1.01
CD40-201ENST00000372276 ERVV-1B6SEH8 477 aa21.34■■□□□ 1.01
CD40-201ENST00000372276 HSPD1P10809 573 aaKnown RBP21.34■■□□□ 1.01
CD40-201ENST00000372276 EXOSC10Q01780 885 aaKnown RBP21.34■■□□□ 1.01
CD40-201ENST00000372276 NAA16Q6N069 864 aaPredicted RBP21.34■■□□□ 1.01
CD40-201ENST00000372276 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.34■■□□□ 1.01
CD40-201ENST00000372276 RGS22Q8NE09 1264 aa21.34■■□□□ 1.01
CD40-201ENST00000372276 ZNF274Q96GC6 653 aaPredicted RBP21.34■■□□□ 1.01
CD40-201ENST00000372276 CDCA7Q9BWT1 371 aaPredicted RBP21.34■■□□□ 1.01
CD40-201ENST00000372276 DISP2A7MBM2 1401 aa21.33■■□□□ 1.01
CD40-201ENST00000372276 CCDC192P0DO97 292 aa21.33■■□□□ 1.01
CD40-201ENST00000372276 CCDC129Q6ZRS4 1044 aa21.33■■□□□ 1.01
CD40-201ENST00000372276 DNAJC10Q8IXB1 793 aa21.33■■□□□ 1.01
CD40-201ENST00000372276 SEC62Q99442 399 aaKnown RBP21.33■■□□□ 1.01
CD40-201ENST00000372276 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.33■■□□□ 1.01
CD40-201ENST00000372276 DDX19AQ9NUU7 478 aaKnown RBP21.33■■□□□ 1.01
CD40-201ENST00000372276 ZKSCAN5Q9Y2L8 839 aa21.33■■□□□ 1.01
CD40-201ENST00000372276 H3BQV1 296 aa21.33■■□□□ 1
CD40-201ENST00000372276 TERF1P54274 439 aa21.33■■□□□ 1
CD40-201ENST00000372276 TTF1Q15361 905 aaPredicted RBP21.33■■□□□ 1
CD40-201ENST00000372276 IFFO2Q5TF58 517 aa21.33■■□□□ 1
CD40-201ENST00000372276 CDC37L1Q7L3B6 337 aa21.33■■□□□ 1
CD40-201ENST00000372276 XAGE2Q96GT9 111 aa21.33■■□□□ 1
CD40-201ENST00000372276 ITGB4P16144 1822 aa21.32■■□□□ 1
CD40-201ENST00000372276 BCL9O00512 1426 aa21.32■■□□□ 1
CD40-201ENST00000372276 RNF214Q8ND24 703 aa21.32■■□□□ 1
CD40-201ENST00000372276 ZNF594Q96JF6 807 aaPredicted RBP21.32■■□□□ 1
CD40-201ENST00000372276 SPATA32Q96LK8 384 aa21.32■■□□□ 1
CD40-201ENST00000372276 PLCH1Q4KWH8 1693 aa21.32■■□□□ 1
CD40-201ENST00000372276 MAST3O60307 1309 aa21.31■■□□□ 1
CD40-201ENST00000372276 WDR19Q8NEZ3 1342 aa21.31■■□□□ 1
CD40-201ENST00000372276 ANKRD18BA2A2Z9 1011 aa21.31■■□□□ 1
CD40-201ENST00000372276 BRF1Q92994 677 aa21.31■■□□□ 1
CD40-201ENST00000372276 TCEANC2Q96MN5 208 aa21.31■■□□□ 1
CD40-201ENST00000372276 BTG4Q9NY30 223 aa21.31■■□□□ 1
CD40-201ENST00000372276 ASAP1Q9ULH1 1129 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms