RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CCT4P50991 539 aaKnown RBP6.4□□□□□ -1.39
ATG4A-204ENST00000372246 TAF7Q15545 349 aaPredicted RBP6.4□□□□□ -1.39
ATG4A-204ENST00000372246 CCDC129Q6ZRS4 1044 aa6.4□□□□□ -1.39
ATG4A-204ENST00000372246 ZNF589Q86UQ0 364 aaPredicted RBP6.4□□□□□ -1.39
ATG4A-204ENST00000372246 RAB11FIP4Q86YS3 637 aa6.4□□□□□ -1.39
ATG4A-204ENST00000372246 LRRC8AQ8IWT6 810 aa6.4□□□□□ -1.39
ATG4A-204ENST00000372246 SECISBP2LQ93073 1101 aaKnown RBP6.4□□□□□ -1.39
ATG4A-204ENST00000372246 CHMP4CQ96CF2 233 aa6.4□□□□□ -1.39
ATG4A-204ENST00000372246 CRB1P82279 1406 aa6.4□□□□□ -1.39
ATG4A-204ENST00000372246 UHRF1BP1LA0JNW5 1464 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 FRMPD1Q5SYB0 1578 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 ZFYVE9O95405 1425 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 A0A0D9SFI3 127 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 CCDC69A6NI79 296 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 GOLGA6L6A8MZA4 724 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 FANCGO15287 622 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 ST5P78524 1137 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 NMIQ13287 307 aaPredicted RBP6.39□□□□□ -1.39
ATG4A-204ENST00000372246 SYT10Q6XYQ8 523 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 ANKRD13DQ6ZTN6 518 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 CHST3Q7LGC8 479 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 TRIM34Q9BYJ4 488 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 BOLA2Q9H3K6 86 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 GJB4Q9NTQ9 266 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 CYP46A1Q9Y6A2 500 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 MORC2Q9Y6X9 1032 aaPredicted RBP6.39□□□□□ -1.39
ATG4A-204ENST00000372246 WASLO00401 505 aaPredicted RBP6.39□□□□□ -1.39
ATG4A-204ENST00000372246 HNRNPH2P55795 449 aaKnown RBP6.39□□□□□ -1.39
ATG4A-204ENST00000372246 KRT85P78386 507 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 PTPN14Q15678 1187 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 CWF19L2Q2TBE0 894 aaKnown RBP6.39□□□□□ -1.39
ATG4A-204ENST00000372246 DMRTA1Q5VZB9 504 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 CREB3L3Q68CJ9 461 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 OTUD7BQ6GQQ9 843 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 PUS7Q96PZ0 661 aaKnown RBP6.39□□□□□ -1.39
ATG4A-204ENST00000372246 ATP7BP35670 1465 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 MYO5BQ9ULV0 1848 aa6.39□□□□□ -1.39
ATG4A-204ENST00000372246 NEURL4Q96JN8 1562 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 PI4KAP2A4QPH2 592 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 ANKRD65E5RJM6 399 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 CCZ1BP86790 482 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 CCZ1P86791 482 aaPredicted RBP6.38□□□□□ -1.39
ATG4A-204ENST00000372246 TOB2Q14106 344 aaPredicted RBP6.38□□□□□ -1.39
ATG4A-204ENST00000372246 E2F4Q16254 413 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 KRT222Q8N1A0 295 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 STK11IPQ8N1F8 1099 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 AOPEPQ8N6M6 819 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 PI4KAP1Q8N8J0 262 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 NFATC2IPQ8NCF5 419 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 IL17REQ8NFR9 667 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 CCDC34Q96HJ3 373 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 EYA1Q99502 592 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 FEZ1Q99689 392 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 NCOA5Q9HCD5 579 aaKnown RBP6.38□□□□□ -1.39
ATG4A-204ENST00000372246 LCMT1Q9UIC8 334 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 METP08581 1390 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 ASXL2Q76L83 1435 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 GNAI3P08754 354 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 PIP4K2AP48426 406 aaPredicted RBP6.38□□□□□ -1.39
ATG4A-204ENST00000372246 CCT2P78371 535 aaKnown RBP6.38□□□□□ -1.39
ATG4A-204ENST00000372246 IQCB1Q15051 598 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 PROSER3Q2NL68 480 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 HDGFL1Q5TGJ6 251 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 CNTROBQ8N137 903 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 BRF1Q92994 677 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 CLSTN2Q9H4D0 955 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 CHPF2Q9P2E5 772 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 ARIH1Q9Y4X5 557 aaPredicted RBP6.38□□□□□ -1.39
ATG4A-204ENST00000372246 PCDHGA10Q9Y5H3 936 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 KIF24Q5T7B8 1368 aa6.38□□□□□ -1.39
ATG4A-204ENST00000372246 PIK3C2BO00750 1634 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 SLC27A2O14975 620 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 TRIM66O15016 1216 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 AACSQ86V21 672 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 SSH3Q8TE77 659 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 LGR6Q9HBX8 967 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 ADCY9O60503 1353 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 TFRCP02786 760 aaKnown RBP6.37□□□□□ -1.39
ATG4A-204ENST00000372246 NECTIN1Q15223 517 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 SKIDA1Q1XH10 827 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 E4F1Q66K89 784 aaPredicted RBP6.37□□□□□ -1.39
ATG4A-204ENST00000372246 NBPF11Q86T75 865 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 DHX40Q8IX18 779 aaKnown RBP6.37□□□□□ -1.39
ATG4A-204ENST00000372246 ZNF397Q8NF99 534 aaPredicted RBP6.37□□□□□ -1.39
ATG4A-204ENST00000372246 RBM33Q96EV2 1170 aaKnown RBP6.37□□□□□ -1.39
ATG4A-204ENST00000372246 ADAM33Q9BZ11 813 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 ZSWIM4Q9H7M6 989 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 ATP6V1DQ9Y5K8 247 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 FHOD1Q9Y613 1164 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 CPSF1Q10570 1443 aaKnown RBP6.37□□□□□ -1.39
ATG4A-204ENST00000372246 ACEP12821 1306 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 TTC21AQ8NDW8 1320 aa6.37□□□□□ -1.39
ATG4A-204ENST00000372246 CDC42BPGQ6DT37 1551 aa6.36□□□□□ -1.39
ATG4A-204ENST00000372246 REREQ9P2R6 1566 aa6.36□□□□□ -1.39
ATG4A-204ENST00000372246 A0A1B0GVL5 298 aa6.36□□□□□ -1.39
ATG4A-204ENST00000372246 GOLGA6L19H0YKK7 550 aa6.36□□□□□ -1.39
ATG4A-204ENST00000372246 PLA2G4AP47712 749 aa6.36□□□□□ -1.39
ATG4A-204ENST00000372246 AIMP1Q12904 312 aaKnown RBP6.36□□□□□ -1.39
ATG4A-204ENST00000372246 PDIA6Q15084 440 aa6.36□□□□□ -1.39
ATG4A-204ENST00000372246 ARHGAP29Q52LW3 1261 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms