RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 ERFEQ4G0M1 354 aa15.71■□□□□ 0.11
LDB3-203ENST00000372056 SPRYD3Q8NCJ5 442 aa15.71■□□□□ 0.11
LDB3-203ENST00000372056 SLC16A10Q8TF71 515 aa15.71■□□□□ 0.11
LDB3-203ENST00000372056 IL25Q9H293 177 aa15.71■□□□□ 0.11
LDB3-203ENST00000372056 GREM2Q9H772 168 aa15.71■□□□□ 0.11
LDB3-203ENST00000372056 CNNM1Q9NRU3 951 aa15.71■□□□□ 0.11
LDB3-203ENST00000372056 K7ELQ4 463 aaPredicted RBP15.71■□□□□ 0.11
LDB3-203ENST00000372056 SGSM2O43147 1006 aa15.71■□□□□ 0.11
LDB3-203ENST00000372056 HCLS1P14317 486 aaPredicted RBP15.71■□□□□ 0.11
LDB3-203ENST00000372056 EZH2Q15910 746 aaKnown RBP15.71■□□□□ 0.11
LDB3-203ENST00000372056 TNNI3KQ59H18 835 aa15.71■□□□□ 0.11
LDB3-203ENST00000372056 ATG9AQ7Z3C6 839 aa15.71■□□□□ 0.11
LDB3-203ENST00000372056 ANO2Q9NQ90 1003 aa15.71■□□□□ 0.11
LDB3-203ENST00000372056 FPGT-TNNI3KV9GXZ4 949 aa15.71■□□□□ 0.11
LDB3-203ENST00000372056 DDX60Q8IY21 1712 aaKnown RBP15.71■□□□□ 0.1
LDB3-203ENST00000372056 FAM177BA6PVY3 158 aa15.7■□□□□ 0.1
LDB3-203ENST00000372056 SOCS7O14512 581 aa15.7■□□□□ 0.1
LDB3-203ENST00000372056 SERPINB2P05120 415 aa15.7■□□□□ 0.1
LDB3-203ENST00000372056 ZNF827Q17R98 1081 aa15.7■□□□□ 0.1
LDB3-203ENST00000372056 EVI5LQ96CN4 794 aa15.7■□□□□ 0.1
LDB3-203ENST00000372056 RIPOR2Q9Y4F9 1068 aa15.7■□□□□ 0.1
LDB3-203ENST00000372056 COL23A1Q86Y22 540 aaPredicted RBP15.69■□□□□ 0.1
LDB3-203ENST00000372056 ANKRD18AQ8IVF6 992 aa15.69■□□□□ 0.1
LDB3-203ENST00000372056 SYNE4Q8N205 404 aa15.69■□□□□ 0.1
LDB3-203ENST00000372056 ABCC12Q96J65 1359 aa15.69■□□□□ 0.1
LDB3-203ENST00000372056 MCCP23508 829 aa15.69■□□□□ 0.1
LDB3-203ENST00000372056 DDIT3P35638 169 aa15.69■□□□□ 0.1
LDB3-203ENST00000372056 DDX46Q7L014 1031 aaKnown RBP15.69■□□□□ 0.1
LDB3-203ENST00000372056 TMC4Q7Z404 712 aa15.69■□□□□ 0.1
LDB3-203ENST00000372056 AMIGO3Q86WK7 504 aa15.69■□□□□ 0.1
LDB3-203ENST00000372056 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.69■□□□□ 0.1
LDB3-203ENST00000372056 IL17RAQ96F46 866 aa15.69■□□□□ 0.1
LDB3-203ENST00000372056 DBNLQ9UJU6 430 aaKnown RBP15.69■□□□□ 0.1
LDB3-203ENST00000372056 ANAPC15P60006 121 aa15.68■□□□□ 0.1
LDB3-203ENST00000372056 METTL24Q5JXM2 366 aa15.68■□□□□ 0.1
LDB3-203ENST00000372056 DIAPH3Q9NSV4 1193 aa15.68■□□□□ 0.1
LDB3-203ENST00000372056 BSDC1Q9NW68 430 aaPredicted RBP15.68■□□□□ 0.1
LDB3-203ENST00000372056 PARP3Q9Y6F1 533 aa15.68■□□□□ 0.1
LDB3-203ENST00000372056 PNPLA7Q6ZV29 1317 aa15.68■□□□□ 0.1
LDB3-203ENST00000372056 HIP1O00291 1037 aa15.67■□□□□ 0.1
LDB3-203ENST00000372056 ATP5JP18859 108 aa15.67■□□□□ 0.1
LDB3-203ENST00000372056 CHMP5Q9NZZ3 219 aa15.67■□□□□ 0.1
LDB3-203ENST00000372056 POLRMTO00411 1230 aaKnown RBP15.67■□□□□ 0.1
LDB3-203ENST00000372056 PDE8BO95263 885 aa15.67■□□□□ 0.1
LDB3-203ENST00000372056 CCDC158Q5M9N0 1113 aa15.67■□□□□ 0.1
LDB3-203ENST00000372056 CWC27Q6UX04 472 aaKnown RBP15.67■□□□□ 0.1
LDB3-203ENST00000372056 PALD1Q9ULE6 856 aa15.67■□□□□ 0.1
LDB3-203ENST00000372056 RAD50Q92878 1312 aa15.66■□□□□ 0.1
LDB3-203ENST00000372056 KLRG2A4D1S0 409 aaPredicted RBP15.66■□□□□ 0.1
LDB3-203ENST00000372056 ST18O60284 1047 aa15.66■□□□□ 0.1
LDB3-203ENST00000372056 FRAT2O75474 233 aaPredicted RBP15.66■□□□□ 0.1
LDB3-203ENST00000372056 LRRFIP1Q32MZ4 808 aaKnown RBP15.66■□□□□ 0.1
LDB3-203ENST00000372056 PRR5LQ6MZQ0 368 aa15.66■□□□□ 0.1
LDB3-203ENST00000372056 RUFY2Q8WXA3 655 aa15.66■□□□□ 0.1
LDB3-203ENST00000372056 BRIP1Q9BX63 1249 aa15.66■□□□□ 0.1
LDB3-203ENST00000372056 ANKRD2Q9GZV1 360 aa15.66■□□□□ 0.1
LDB3-203ENST00000372056 LSG1Q9H089 658 aaKnown RBP15.66■□□□□ 0.1
LDB3-203ENST00000372056 BOLA2Q9H3K6 86 aa15.66■□□□□ 0.1
LDB3-203ENST00000372056 LRP5O75197 1615 aa15.65■□□□□ 0.1
LDB3-203ENST00000372056 PDE6BP35913 854 aa15.65■□□□□ 0.1
LDB3-203ENST00000372056 RPS8P62241 208 aaKnown RBP15.65■□□□□ 0.1
LDB3-203ENST00000372056 PUM3Q15397 648 aaKnown RBP15.65■□□□□ 0.1
LDB3-203ENST00000372056 LRRC24Q50LG9 513 aa15.65■□□□□ 0.1
LDB3-203ENST00000372056 LPIN2Q92539 896 aa15.65■□□□□ 0.1
LDB3-203ENST00000372056 RBM17Q96I25 401 aaKnown RBP15.65■□□□□ 0.1
LDB3-203ENST00000372056 ZNF594Q96JF6 807 aaPredicted RBP15.65■□□□□ 0.1
LDB3-203ENST00000372056 ZNF512BQ96KM6 892 aaPredicted RBP15.65■□□□□ 0.1
LDB3-203ENST00000372056 HSPA4P34932 840 aa15.65■□□□□ 0.1
LDB3-203ENST00000372056 CRY2Q49AN0 593 aa15.65■□□□□ 0.1
LDB3-203ENST00000372056 GORABQ5T7V8 394 aa15.65■□□□□ 0.1
LDB3-203ENST00000372056 RPGRQ92834 1020 aaKnown RBP15.65■□□□□ 0.1
LDB3-203ENST00000372056 DBNDD2Q9BQY9 259 aa15.65■□□□□ 0.1
LDB3-203ENST00000372056 A0A1B0GUL7 405 aa15.64■□□□□ 0.09
LDB3-203ENST00000372056 BBOX1O75936 387 aa15.64■□□□□ 0.09
LDB3-203ENST00000372056 IFIT1P09914 478 aaKnown RBP15.64■□□□□ 0.09
LDB3-203ENST00000372056 ATP2B3Q16720 1220 aa15.64■□□□□ 0.09
LDB3-203ENST00000372056 SMIM5Q71RC9 77 aa15.64■□□□□ 0.09
LDB3-203ENST00000372056 ZNF609O15014 1411 aa15.64■□□□□ 0.09
LDB3-203ENST00000372056 ZBTB22O15209 634 aa15.63■□□□□ 0.09
LDB3-203ENST00000372056 HSP90AA1P07900 732 aaKnown RBP15.63■□□□□ 0.09
LDB3-203ENST00000372056 SLC5A1P13866 664 aa15.63■□□□□ 0.09
LDB3-203ENST00000372056 HOXA10P31260 410 aaPredicted RBP15.63■□□□□ 0.09
LDB3-203ENST00000372056 KIAA1211Q6ZU35 1233 aa15.63■□□□□ 0.09
LDB3-203ENST00000372056 IL27Q8NEV9 243 aa15.63■□□□□ 0.09
LDB3-203ENST00000372056 NEUROD6Q96NK8 337 aa15.63■□□□□ 0.09
LDB3-203ENST00000372056 CCDC85AQ96PX6 553 aaPredicted RBP15.63■□□□□ 0.09
LDB3-203ENST00000372056 CRAMP1Q96RY5 1269 aa15.63■□□□□ 0.09
LDB3-203ENST00000372056 CIZ1Q9ULV3 898 aaPredicted RBP15.63■□□□□ 0.09
LDB3-203ENST00000372056 IGSF3O75054 1194 aa15.63■□□□□ 0.09
LDB3-203ENST00000372056 UQCRFS1P1P0C7P4 283 aa15.63■□□□□ 0.09
LDB3-203ENST00000372056 UBE4AQ14139 1066 aa15.63■□□□□ 0.09
LDB3-203ENST00000372056 PUS3Q9BZE2 481 aaKnown RBP15.63■□□□□ 0.09
LDB3-203ENST00000372056 NRXN2Q9P2S2 1712 aa15.63■□□□□ 0.09
LDB3-203ENST00000372056 ALDH1B1P30837 517 aa15.62■□□□□ 0.09
LDB3-203ENST00000372056 NEK4P51957 841 aa15.62■□□□□ 0.09
LDB3-203ENST00000372056 GRAPQ13588 217 aa15.62■□□□□ 0.09
LDB3-203ENST00000372056 VGLL2Q8N8G2 317 aa15.62■□□□□ 0.09
LDB3-203ENST00000372056 GRAPLQ8TC17 118 aaPredicted RBP15.62■□□□□ 0.09
LDB3-203ENST00000372056 FSD1Q9BTV5 496 aa15.62■□□□□ 0.09
LDB3-203ENST00000372056 SNRKQ9NRH2 765 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms