RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 MYH14Q7Z406 1995 aaKnown RBP23.78■■□□□ 1.4
LHX3-202ENST00000371748 PTMSP20962 102 aa23.78■■□□□ 1.4
LHX3-202ENST00000371748 C8orf37Q96NL8 207 aa23.78■■□□□ 1.4
LHX3-202ENST00000371748 ADORA1P30542 326 aa23.77■■□□□ 1.4
LHX3-202ENST00000371748 COL9A3Q14050 684 aaPredicted RBP23.77■■□□□ 1.4
LHX3-202ENST00000371748 SLFNL1Q499Z3 407 aa23.77■■□□□ 1.4
LHX3-202ENST00000371748 VPS53Q5VIR6 699 aa23.77■■□□□ 1.4
LHX3-202ENST00000371748 ZNF34Q8IZ26 560 aa23.77■■□□□ 1.4
LHX3-202ENST00000371748 PALLDQ8WX93 1383 aa23.77■■□□□ 1.4
LHX3-202ENST00000371748 CHAMP1Q96JM3 812 aa23.77■■□□□ 1.4
LHX3-202ENST00000371748 LARGE1O95461 756 aa23.76■■□□□ 1.39
LHX3-202ENST00000371748 MCMDC2Q4G0Z9 681 aa23.76■■□□□ 1.39
LHX3-202ENST00000371748 RNF20Q5VTR2 975 aa23.76■■□□□ 1.39
LHX3-202ENST00000371748 AKAP2Q9Y2D5 859 aa23.76■■□□□ 1.39
LHX3-202ENST00000371748 SKOR2Q2VWA4 1001 aaPredicted RBP23.76■■□□□ 1.39
LHX3-202ENST00000371748 GAS2L3Q86XJ1 694 aa23.76■■□□□ 1.39
LHX3-202ENST00000371748 XAGE2Q96GT9 111 aa23.76■■□□□ 1.39
LHX3-202ENST00000371748 RPAP1Q9BWH6 1393 aaPredicted RBP23.76■■□□□ 1.39
LHX3-202ENST00000371748 NGLY1Q96IV0 654 aa23.75■■□□□ 1.39
LHX3-202ENST00000371748 RIC1Q4ADV7 1423 aa23.75■■□□□ 1.39
LHX3-202ENST00000371748 BRD1O95696 1058 aa23.74■■□□□ 1.39
LHX3-202ENST00000371748 GORABQ5T7V8 394 aa23.74■■□□□ 1.39
LHX3-202ENST00000371748 LDHAL6AQ6ZMR3 332 aa23.74■■□□□ 1.39
LHX3-202ENST00000371748 ANKRD18BA2A2Z9 1011 aa23.74■■□□□ 1.39
LHX3-202ENST00000371748 FAM177BA6PVY3 158 aa23.74■■□□□ 1.39
LHX3-202ENST00000371748 PDE8AO60658 829 aa23.74■■□□□ 1.39
LHX3-202ENST00000371748 METTL24Q5JXM2 366 aa23.73■■□□□ 1.39
LHX3-202ENST00000371748 CCDC158Q5M9N0 1113 aa23.73■■□□□ 1.39
LHX3-202ENST00000371748 RIPOR2Q9Y4F9 1068 aa23.73■■□□□ 1.39
LHX3-202ENST00000371748 PSMA5P28066 241 aa23.73■■□□□ 1.39
LHX3-202ENST00000371748 TTC39AQ5SRH9 613 aa23.73■■□□□ 1.39
LHX3-202ENST00000371748 SH3TC1Q8TE82 1336 aa23.73■■□□□ 1.39
LHX3-202ENST00000371748 RREB1Q92766 1687 aa23.73■■□□□ 1.39
LHX3-202ENST00000371748 FKBP4Q02790 459 aaKnown RBP eCLIP23.72■■□□□ 1.39
LHX3-202ENST00000371748 USPL1Q5W0Q7 1092 aa23.72■■□□□ 1.39
LHX3-202ENST00000371748 CNNM1Q9NRU3 951 aa23.72■■□□□ 1.39
LHX3-202ENST00000371748 BCL9LQ86UU0 1499 aa23.72■■□□□ 1.39
LHX3-202ENST00000371748 SUSD4Q5VX71 490 aa23.72■■□□□ 1.39
LHX3-202ENST00000371748 TCEANC2Q96MN5 208 aa23.72■■□□□ 1.39
LHX3-202ENST00000371748 SPEF2Q9C093 1822 aa23.71■■□□□ 1.39
LHX3-202ENST00000371748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.71■■□□□ 1.39
LHX3-202ENST00000371748 HMG20BQ9P0W2 317 aa23.71■■□□□ 1.39
LHX3-202ENST00000371748 BLOC1S2Q6QNY1 142 aa23.71■■□□□ 1.39
LHX3-202ENST00000371748 LMBRD1Q9NUN5 540 aa23.71■■□□□ 1.39
LHX3-202ENST00000371748 DDX49Q9Y6V7 483 aaKnown RBP23.71■■□□□ 1.39
LHX3-202ENST00000371748 CAMTA2O94983 1202 aa23.7■■□□□ 1.38
LHX3-202ENST00000371748 ATP2B3Q16720 1220 aa23.7■■□□□ 1.38
LHX3-202ENST00000371748 CCDC83Q8IWF9 413 aa23.7■■□□□ 1.38
LHX3-202ENST00000371748 CICQ96RK0 1608 aaPredicted RBP23.7■■□□□ 1.38
LHX3-202ENST00000371748 HCLS1P14317 486 aaPredicted RBP23.7■■□□□ 1.38
LHX3-202ENST00000371748 SCARF1Q14162 830 aa23.7■■□□□ 1.38
LHX3-202ENST00000371748 VPS72Q15906 364 aa23.7■■□□□ 1.38
LHX3-202ENST00000371748 HELLSQ9NRZ9 838 aa23.7■■□□□ 1.38
LHX3-202ENST00000371748 DTNBO60941 627 aa23.69■■□□□ 1.38
LHX3-202ENST00000371748 ZMYM1Q5SVZ6 1142 aa23.69■■□□□ 1.38
LHX3-202ENST00000371748 SMARCC1Q92922 1105 aaPredicted RBP23.69■■□□□ 1.38
LHX3-202ENST00000371748 ESPNB1AK53 854 aa23.69■■□□□ 1.38
LHX3-202ENST00000371748 ME3Q16798 604 aa23.69■■□□□ 1.38
LHX3-202ENST00000371748 TSGA10IPQ3SY00 556 aa23.69■■□□□ 1.38
LHX3-202ENST00000371748 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.69■■□□□ 1.38
LHX3-202ENST00000371748 U3KPZ7 1027 aaPredicted RBP23.69■■□□□ 1.38
LHX3-202ENST00000371748 COL5A3P25940 1745 aaPredicted RBP23.68■■□□□ 1.38
LHX3-202ENST00000371748 PRPF40AO75400 957 aaKnown RBP23.68■■□□□ 1.38
LHX3-202ENST00000371748 RPS6KB1P23443 525 aa23.68■■□□□ 1.38
LHX3-202ENST00000371748 ZSCAN31Q96LW9 406 aaPredicted RBP23.68■■□□□ 1.38
LHX3-202ENST00000371748 NAP1L5Q96NT1 182 aaPredicted RBP23.68■■□□□ 1.38
LHX3-202ENST00000371748 TPCN1Q9ULQ1 816 aa23.68■■□□□ 1.38
LHX3-202ENST00000371748 RNF113AO15541 343 aaKnown RBP23.67■■□□□ 1.38
LHX3-202ENST00000371748 KLHL40Q2TBA0 621 aa23.67■■□□□ 1.38
LHX3-202ENST00000371748 SMC3Q9UQE7 1217 aa23.67■■□□□ 1.38
LHX3-202ENST00000371748 CYP21A2P08686 494 aa23.67■■□□□ 1.38
LHX3-202ENST00000371748 ST3GAL1Q11201 340 aa23.67■■□□□ 1.38
LHX3-202ENST00000371748 SH2B1Q9NRF2 756 aaPredicted RBP23.67■■□□□ 1.38
LHX3-202ENST00000371748 KCNQ4P56696 695 aa23.66■■□□□ 1.38
LHX3-202ENST00000371748 PI16Q6UXB8 463 aa23.66■■□□□ 1.38
LHX3-202ENST00000371748 VGLL2Q8N8G2 317 aa23.66■■□□□ 1.38
LHX3-202ENST00000371748 NECAB1Q8N987 351 aa23.66■■□□□ 1.38
LHX3-202ENST00000371748 UTP14AQ9BVJ6 771 aaKnown RBP23.66■■□□□ 1.38
LHX3-202ENST00000371748 MAST3O60307 1309 aa23.66■■□□□ 1.38
LHX3-202ENST00000371748 ZAP70P43403 619 aa23.66■■□□□ 1.38
LHX3-202ENST00000371748 FOXD4L6Q3SYB3 417 aaPredicted RBP23.65■■□□□ 1.38
LHX3-202ENST00000371748 FOXD4L3Q6VB84 417 aaPredicted RBP23.65■■□□□ 1.38
LHX3-202ENST00000371748 NIP7Q9Y221 180 aaKnown RBP eCLIP23.65■■□□□ 1.38
LHX3-202ENST00000371748 WDR33Q9C0J8 1336 aaKnown RBP23.65■■□□□ 1.38
LHX3-202ENST00000371748 KRT32Q14532 448 aa23.65■■□□□ 1.38
LHX3-202ENST00000371748 PTF1AQ7RTS3 328 aa23.65■■□□□ 1.38
LHX3-202ENST00000371748 M0R2C6 588 aa23.64■■□□□ 1.38
LHX3-202ENST00000371748 TICAM2Q86XR7 235 aa23.64■■□□□ 1.38
LHX3-202ENST00000371748 LINC00116Q8NCU8 138 aa23.64■■□□□ 1.38
LHX3-202ENST00000371748 DDX60Q8IY21 1712 aaKnown RBP23.64■■□□□ 1.38
LHX3-202ENST00000371748 AKAP11Q9UKA4 1901 aa23.64■■□□□ 1.37
LHX3-202ENST00000371748 PDE8BO95263 885 aa23.64■■□□□ 1.37
LHX3-202ENST00000371748 NCLP19338 710 aaKnown RBP23.64■■□□□ 1.37
LHX3-202ENST00000371748 TOB2Q14106 344 aaPredicted RBP23.64■■□□□ 1.37
LHX3-202ENST00000371748 NEK1Q96PY6 1258 aa23.64■■□□□ 1.37
LHX3-202ENST00000371748 GJB2P29033 226 aa23.63■■□□□ 1.37
LHX3-202ENST00000371748 PARP10Q53GL7 1025 aa23.63■■□□□ 1.37
LHX3-202ENST00000371748 HELBQ8NG08 1087 aaPredicted RBP23.63■■□□□ 1.37
LHX3-202ENST00000371748 AK7Q96M32 723 aa23.63■■□□□ 1.37
LHX3-202ENST00000371748 SYT1P21579 422 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms