RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 ZSWIM6Q9HCJ5 1215 aa28.5■■■□□ 2.15
LHX3-201ENST00000371746 BAG4O95429 457 aaKnown RBP28.49■■■□□ 2.15
LHX3-201ENST00000371746 LINC00116Q8NCU8 138 aa28.49■■■□□ 2.15
LHX3-201ENST00000371746 SH3TC1Q8TE82 1336 aa28.49■■■□□ 2.15
LHX3-201ENST00000371746 FKBP4Q02790 459 aaKnown RBP eCLIP28.49■■■□□ 2.15
LHX3-201ENST00000371746 MCMDC2Q4G0Z9 681 aa28.49■■■□□ 2.15
LHX3-201ENST00000371746 CCDC158Q5M9N0 1113 aa28.48■■■□□ 2.15
LHX3-201ENST00000371746 CLEC17AQ6ZS10 378 aa28.48■■■□□ 2.15
LHX3-201ENST00000371746 TM6SF1Q9BZW5 370 aa28.48■■■□□ 2.15
LHX3-201ENST00000371746 CYP46A1Q9Y6A2 500 aa28.48■■■□□ 2.15
LHX3-201ENST00000371746 ATP2B3Q16720 1220 aa28.48■■■□□ 2.15
LHX3-201ENST00000371746 TTC39AQ5SRH9 613 aa28.48■■■□□ 2.15
LHX3-201ENST00000371746 PDRG1Q9NUG6 133 aa28.48■■■□□ 2.15
LHX3-201ENST00000371746 NIP7Q9Y221 180 aaKnown RBP eCLIP28.48■■■□□ 2.15
LHX3-201ENST00000371746 SCARF1Q14162 830 aa28.47■■■□□ 2.15
LHX3-201ENST00000371746 FOXD4L5Q5VV16 416 aaPredicted RBP28.47■■■□□ 2.15
LHX3-201ENST00000371746 FOXD4L4Q8WXT5 416 aaPredicted RBP28.47■■■□□ 2.15
LHX3-201ENST00000371746 UTP14AQ9BVJ6 771 aaKnown RBP28.47■■■□□ 2.15
LHX3-201ENST00000371746 LIMCH1Q9UPQ0 1083 aa28.47■■■□□ 2.15
LHX3-201ENST00000371746 IL27Q8NEV9 243 aa28.47■■■□□ 2.15
LHX3-201ENST00000371746 RNF20Q5VTR2 975 aa28.46■■■□□ 2.15
LHX3-201ENST00000371746 SPATA31A6Q5VVP1 1343 aa28.46■■■□□ 2.15
LHX3-201ENST00000371746 VPS53Q5VIR6 699 aa28.45■■■□□ 2.15
LHX3-201ENST00000371746 SMIM5Q71RC9 77 aa28.45■■■□□ 2.15
LHX3-201ENST00000371746 RPAP1Q9BWH6 1393 aaPredicted RBP28.45■■■□□ 2.15
LHX3-201ENST00000371746 RREB1Q92766 1687 aa28.45■■■□□ 2.15
LHX3-201ENST00000371746 PI16Q6UXB8 463 aa28.45■■■□□ 2.14
LHX3-201ENST00000371746 LARGE1O95461 756 aa28.44■■■□□ 2.14
LHX3-201ENST00000371746 VGLL2Q8N8G2 317 aa28.44■■■□□ 2.14
LHX3-201ENST00000371746 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.44■■■□□ 2.14
LHX3-201ENST00000371746 MYH3P11055 1940 aa28.44■■■□□ 2.14
LHX3-201ENST00000371746 USPL1Q5W0Q7 1092 aa28.43■■■□□ 2.14
LHX3-201ENST00000371746 CHAMP1Q96JM3 812 aa28.43■■■□□ 2.14
LHX3-201ENST00000371746 PARP10Q53GL7 1025 aa28.43■■■□□ 2.14
LHX3-201ENST00000371746 TCEANC2Q96MN5 208 aa28.43■■■□□ 2.14
LHX3-201ENST00000371746 CICQ96RK0 1608 aaPredicted RBP28.43■■■□□ 2.14
LHX3-201ENST00000371746 NTSR2O95665 410 aa28.42■■■□□ 2.14
LHX3-201ENST00000371746 MCTP1Q6DN14 999 aa28.42■■■□□ 2.14
LHX3-201ENST00000371746 HELBQ8NG08 1087 aaPredicted RBP28.42■■■□□ 2.14
LHX3-201ENST00000371746 SEC31BQ9NQW1 1179 aa28.42■■■□□ 2.14
LHX3-201ENST00000371746 ZMYM1Q5SVZ6 1142 aa28.41■■■□□ 2.14
LHX3-201ENST00000371746 PDE8BO95263 885 aa28.41■■■□□ 2.14
LHX3-201ENST00000371746 PSMA5P28066 241 aa28.41■■■□□ 2.14
LHX3-201ENST00000371746 ZAP70P43403 619 aa28.41■■■□□ 2.14
LHX3-201ENST00000371746 AK7Q96M32 723 aa28.41■■■□□ 2.14
LHX3-201ENST00000371746 HMG20BQ9P0W2 317 aa28.41■■■□□ 2.14
LHX3-201ENST00000371746 GOLGA6L22H0YM25 854 aa28.4■■■□□ 2.14
LHX3-201ENST00000371746 MEX3CQ5U5Q3 659 aaKnown RBP28.4■■■□□ 2.14
LHX3-201ENST00000371746 HELLSQ9NRZ9 838 aa28.4■■■□□ 2.14
LHX3-201ENST00000371746 RNF113AO15541 343 aaKnown RBP28.4■■■□□ 2.14
LHX3-201ENST00000371746 DTNBO60941 627 aa28.39■■■□□ 2.14
LHX3-201ENST00000371746 BLOC1S2Q6QNY1 142 aa28.39■■■□□ 2.14
LHX3-201ENST00000371746 COL5A3P25940 1745 aaPredicted RBP28.39■■■□□ 2.14
LHX3-201ENST00000371746 MAST3O60307 1309 aa28.39■■■□□ 2.13
LHX3-201ENST00000371746 U3KPZ7 1027 aaPredicted RBP28.39■■■□□ 2.13
LHX3-201ENST00000371746 BRD1O95696 1058 aa28.38■■■□□ 2.13
LHX3-201ENST00000371746 ZNF652Q9Y2D9 606 aa28.38■■■□□ 2.13
LHX3-201ENST00000371746 CYP21A2P08686 494 aa28.38■■■□□ 2.13
LHX3-201ENST00000371746 MCAMP43121 646 aa28.38■■■□□ 2.13
LHX3-201ENST00000371746 TSGA10IPQ3SY00 556 aa28.38■■■□□ 2.13
LHX3-201ENST00000371746 HSPA1LP34931 641 aa28.37■■■□□ 2.13
LHX3-201ENST00000371746 CERKQ8TCT0 537 aa28.37■■■□□ 2.13
LHX3-201ENST00000371746 SNAP23O00161 211 aa28.37■■■□□ 2.13
LHX3-201ENST00000371746 CCDC83Q8IWF9 413 aa28.37■■■□□ 2.13
LHX3-201ENST00000371746 OSBP2Q969R2 916 aa28.37■■■□□ 2.13
LHX3-201ENST00000371746 M0R2C6 588 aa28.36■■■□□ 2.13
LHX3-201ENST00000371746 RPS6KB1P23443 525 aa28.36■■■□□ 2.13
LHX3-201ENST00000371746 ME3Q16798 604 aa28.36■■■□□ 2.13
LHX3-201ENST00000371746 TPCN1Q9ULQ1 816 aa28.36■■■□□ 2.13
LHX3-201ENST00000371746 GJD4Q96KN9 370 aaPredicted RBP28.35■■■□□ 2.13
LHX3-201ENST00000371746 MPHOSPH8Q99549 860 aa28.35■■■□□ 2.13
LHX3-201ENST00000371746 CCDC152Q4G0S7 254 aa28.34■■■□□ 2.13
LHX3-201ENST00000371746 BICDL1Q6ZP65 573 aa28.34■■■□□ 2.13
LHX3-201ENST00000371746 TICAM2Q86XR7 235 aa28.34■■■□□ 2.13
LHX3-201ENST00000371746 MROH5Q6ZUA9 1318 aa28.34■■■□□ 2.13
LHX3-201ENST00000371746 CNTNAP4Q9C0A0 1308 aa28.34■■■□□ 2.13
LHX3-201ENST00000371746 LRP5O75197 1615 aa28.34■■■□□ 2.13
LHX3-201ENST00000371746 ST3GAL1Q11201 340 aa28.34■■■□□ 2.13
LHX3-201ENST00000371746 PUM3Q15397 648 aaKnown RBP28.34■■■□□ 2.13
LHX3-201ENST00000371746 CLEC4GQ6UXB4 293 aa28.34■■■□□ 2.13
LHX3-201ENST00000371746 NECAB1Q8N987 351 aa28.34■■■□□ 2.13
LHX3-201ENST00000371746 EP400Q96L91 3159 aa28.34■■■□□ 2.13
LHX3-201ENST00000371746 THSD7AQ9UPZ6 1657 aa28.34■■■□□ 2.13
LHX3-201ENST00000371746 SPEF2Q9C093 1822 aa28.34■■■□□ 2.13
LHX3-201ENST00000371746 HSPD1P10809 573 aaKnown RBP28.33■■■□□ 2.13
LHX3-201ENST00000371746 PTMSP20962 102 aa28.33■■■□□ 2.13
LHX3-201ENST00000371746 PHKA1P46020 1223 aa28.33■■■□□ 2.13
LHX3-201ENST00000371746 WASHC4Q2M389 1173 aa28.33■■■□□ 2.13
LHX3-201ENST00000371746 ABCC12Q96J65 1359 aa28.33■■■□□ 2.13
LHX3-201ENST00000371746 CCDC102BQ68D86 513 aa28.33■■■□□ 2.13
LHX3-201ENST00000371746 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.33■■■□□ 2.13
LHX3-201ENST00000371746 AFF2P51816 1311 aa28.33■■■□□ 2.13
LHX3-201ENST00000371746 A0A0G2JLW4 131 aa28.32■■■□□ 2.12
LHX3-201ENST00000371746 KRT32Q14532 448 aa28.32■■■□□ 2.12
LHX3-201ENST00000371746 SKOR2Q2VWA4 1001 aaPredicted RBP28.32■■■□□ 2.12
LHX3-201ENST00000371746 ZSCAN31Q96LW9 406 aaPredicted RBP28.32■■■□□ 2.12
LHX3-201ENST00000371746 DSCC1Q9BVC3 393 aa28.32■■■□□ 2.12
LHX3-201ENST00000371746 SH2B1Q9NRF2 756 aaPredicted RBP28.32■■■□□ 2.12
LHX3-201ENST00000371746 NEK1Q96PY6 1258 aa28.32■■■□□ 2.12
LHX3-201ENST00000371746 TOB2Q14106 344 aaPredicted RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms