RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ATP2B3Q16720 1220 aa21.23■□□□□ 0.99
SSBP3-203ENST00000371319 C3orf67Q6ZVT6 689 aa21.23■□□□□ 0.99
SSBP3-203ENST00000371319 DNAJC2Q99543 621 aaKnown RBP21.23■□□□□ 0.99
SSBP3-203ENST00000371319 SNRKQ9NRH2 765 aa21.23■□□□□ 0.99
SSBP3-203ENST00000371319 ADRA2BP18089 450 aa21.23■□□□□ 0.99
SSBP3-203ENST00000371319 MCCP23508 829 aa21.23■□□□□ 0.99
SSBP3-203ENST00000371319 FAM227BQ96M60 508 aa21.23■□□□□ 0.99
SSBP3-203ENST00000371319 SETDB2Q96T68 719 aa21.23■□□□□ 0.99
SSBP3-203ENST00000371319 MROH5Q6ZUA9 1318 aa21.22■□□□□ 0.99
SSBP3-203ENST00000371319 RFC4P35249 363 aa21.22■□□□□ 0.99
SSBP3-203ENST00000371319 SF3B3Q15393 1217 aaKnown RBP21.22■□□□□ 0.99
SSBP3-203ENST00000371319 NYXQ9GZU5 481 aa21.22■□□□□ 0.99
SSBP3-203ENST00000371319 PALD1Q9ULE6 856 aa21.22■□□□□ 0.99
SSBP3-203ENST00000371319 A0A1B0GUL6 1792 aa21.21■□□□□ 0.99
SSBP3-203ENST00000371319 PDE8BO95263 885 aa21.21■□□□□ 0.99
SSBP3-203ENST00000371319 RXRBP28702 533 aa21.21■□□□□ 0.99
SSBP3-203ENST00000371319 HSPA4P34932 840 aa21.21■□□□□ 0.99
SSBP3-203ENST00000371319 PROM2Q8N271 834 aa21.21■□□□□ 0.99
SSBP3-203ENST00000371319 A0A0D9SFI3 127 aa21.2■□□□□ 0.98
SSBP3-203ENST00000371319 IFIT1P09914 478 aaKnown RBP21.2■□□□□ 0.98
SSBP3-203ENST00000371319 ANAPC15P60006 121 aa21.2■□□□□ 0.98
SSBP3-203ENST00000371319 PAG1Q9NWQ8 432 aa21.2■□□□□ 0.98
SSBP3-203ENST00000371319 MED23Q9ULK4 1368 aa21.2■□□□□ 0.98
SSBP3-203ENST00000371319 FGFR2P21802 821 aa21.19■□□□□ 0.98
SSBP3-203ENST00000371319 CCDC158Q5M9N0 1113 aa21.19■□□□□ 0.98
SSBP3-203ENST00000371319 DDX46Q7L014 1031 aaKnown RBP21.19■□□□□ 0.98
SSBP3-203ENST00000371319 KBTBD3Q8NAB2 608 aa21.19■□□□□ 0.98
SSBP3-203ENST00000371319 TAF1P21675 1872 aa21.19■□□□□ 0.98
SSBP3-203ENST00000371319 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.19■□□□□ 0.98
SSBP3-203ENST00000371319 GOLIM4O00461 696 aa21.19■□□□□ 0.98
SSBP3-203ENST00000371319 PTH1RQ03431 593 aa21.19■□□□□ 0.98
SSBP3-203ENST00000371319 TXNRD1Q16881 649 aa21.19■□□□□ 0.98
SSBP3-203ENST00000371319 TTC39AQ5SRH9 613 aa21.19■□□□□ 0.98
SSBP3-203ENST00000371319 KIAA1211Q6ZU35 1233 aa21.19■□□□□ 0.98
SSBP3-203ENST00000371319 NBPF5PQ86XG9 351 aaPredicted RBP21.19■□□□□ 0.98
SSBP3-203ENST00000371319 AKAP11Q9UKA4 1901 aa21.18■□□□□ 0.98
SSBP3-203ENST00000371319 TNRC6CQ9HCJ0 1690 aaKnown RBP21.18■□□□□ 0.98
SSBP3-203ENST00000371319 IGHMBP2P38935 993 aaKnown RBP21.18■□□□□ 0.98
SSBP3-203ENST00000371319 GORABQ5T7V8 394 aa21.18■□□□□ 0.98
SSBP3-203ENST00000371319 MPHOSPH8Q99549 860 aa21.18■□□□□ 0.98
SSBP3-203ENST00000371319 ANP32EQ9BTT0 268 aa21.18■□□□□ 0.98
SSBP3-203ENST00000371319 ANTXR1Q9H6X2 564 aa21.18■□□□□ 0.98
SSBP3-203ENST00000371319 RGS17Q9UGC6 210 aaPredicted RBP21.18■□□□□ 0.98
SSBP3-203ENST00000371319 TNS1Q9HBL0 1735 aaKnown RBP21.18■□□□□ 0.98
SSBP3-203ENST00000371319 SSFA2P28290 1259 aa21.17■□□□□ 0.98
SSBP3-203ENST00000371319 PUM3Q15397 648 aaKnown RBP21.17■□□□□ 0.98
SSBP3-203ENST00000371319 TICAM2Q86XR7 235 aa21.17■□□□□ 0.98
SSBP3-203ENST00000371319 HELBQ8NG08 1087 aaPredicted RBP21.17■□□□□ 0.98
SSBP3-203ENST00000371319 CCDC171Q6TFL3 1326 aa21.16■□□□□ 0.98
SSBP3-203ENST00000371319 K7ELQ4 463 aaPredicted RBP21.16■□□□□ 0.98
SSBP3-203ENST00000371319 GTF2E1P29083 439 aaPredicted RBP21.16■□□□□ 0.98
SSBP3-203ENST00000371319 SCARF1Q14162 830 aa21.16■□□□□ 0.98
SSBP3-203ENST00000371319 NFIXQ14938 502 aa21.16■□□□□ 0.98
SSBP3-203ENST00000371319 TPTE2Q6XPS3 522 aa21.16■□□□□ 0.98
SSBP3-203ENST00000371319 CDC5LQ99459 802 aaKnown RBP21.16■□□□□ 0.98
SSBP3-203ENST00000371319 CARMIL3Q8ND23 1372 aa21.15■□□□□ 0.98
SSBP3-203ENST00000371319 CHGBP05060 677 aa21.15■□□□□ 0.98
SSBP3-203ENST00000371319 LPIN2Q92539 896 aa21.15■□□□□ 0.98
SSBP3-203ENST00000371319 ZNF512BQ96KM6 892 aaPredicted RBP21.15■□□□□ 0.98
SSBP3-203ENST00000371319 PLSCR1O15162 318 aa21.14■□□□□ 0.98
SSBP3-203ENST00000371319 KCNB2Q92953 911 aa21.14■□□□□ 0.98
SSBP3-203ENST00000371319 TAF5LO75529 589 aa21.14■□□□□ 0.97
SSBP3-203ENST00000371319 GYS1P13807 737 aa21.14■□□□□ 0.97
SSBP3-203ENST00000371319 ZNF589Q86UQ0 364 aaPredicted RBP21.14■□□□□ 0.97
SSBP3-203ENST00000371319 SPRYD3Q8NCJ5 442 aa21.14■□□□□ 0.97
SSBP3-203ENST00000371319 SLKQ9H2G2 1235 aaPredicted RBP21.14■□□□□ 0.97
SSBP3-203ENST00000371319 SNX14Q9Y5W7 946 aa21.14■□□□□ 0.97
SSBP3-203ENST00000371319 SLC5A1P13866 664 aa21.13■□□□□ 0.97
SSBP3-203ENST00000371319 CHRNDQ07001 517 aa21.13■□□□□ 0.97
SSBP3-203ENST00000371319 POTEAQ6S8J7 498 aa21.13■□□□□ 0.97
SSBP3-203ENST00000371319 ANKRD18AQ8IVF6 992 aa21.13■□□□□ 0.97
SSBP3-203ENST00000371319 CCDC24Q8N4L8 307 aa21.13■□□□□ 0.97
SSBP3-203ENST00000371319 MAP4K1Q92918 833 aa21.13■□□□□ 0.97
SSBP3-203ENST00000371319 NLRP3Q96P20 1036 aa21.13■□□□□ 0.97
SSBP3-203ENST00000371319 RGPD3A6NKT7 1758 aaPredicted RBP21.13■□□□□ 0.97
SSBP3-203ENST00000371319 RGPD4Q7Z3J3 1758 aa21.13■□□□□ 0.97
SSBP3-203ENST00000371319 MYH7P12883 1935 aa21.13■□□□□ 0.97
SSBP3-203ENST00000371319 ST18O60284 1047 aa21.12■□□□□ 0.97
SSBP3-203ENST00000371319 APBA3O96018 575 aa21.12■□□□□ 0.97
SSBP3-203ENST00000371319 HMGB2P26583 209 aaKnown RBP21.12■□□□□ 0.97
SSBP3-203ENST00000371319 ARID4AP29374 1257 aaPredicted RBP21.12■□□□□ 0.97
SSBP3-203ENST00000371319 MCAMP43121 646 aa21.12■□□□□ 0.97
SSBP3-203ENST00000371319 ZAP70P43403 619 aa21.12■□□□□ 0.97
SSBP3-203ENST00000371319 RASEFQ8IZ41 740 aa21.12■□□□□ 0.97
SSBP3-203ENST00000371319 PHKA1P46020 1223 aa21.11■□□□□ 0.97
SSBP3-203ENST00000371319 FKBP4Q02790 459 aaKnown RBP eCLIP21.11■□□□□ 0.97
SSBP3-203ENST00000371319 NECTIN1Q15223 517 aa21.11■□□□□ 0.97
SSBP3-203ENST00000371319 MCMDC2Q4G0Z9 681 aa21.11■□□□□ 0.97
SSBP3-203ENST00000371319 CCDC102BQ68D86 513 aa21.11■□□□□ 0.97
SSBP3-203ENST00000371319 CELF1Q92879 486 aaKnown RBP21.11■□□□□ 0.97
SSBP3-203ENST00000371319 BSDC1Q9NW68 430 aaPredicted RBP21.11■□□□□ 0.97
SSBP3-203ENST00000371319 RBM8AQ9Y5S9 174 aaKnown RBP21.11■□□□□ 0.97
SSBP3-203ENST00000371319 SNAP23O00161 211 aa21.1■□□□□ 0.97
SSBP3-203ENST00000371319 NEK4P51957 841 aa21.1■□□□□ 0.97
SSBP3-203ENST00000371319 ZNF827Q17R98 1081 aa21.1■□□□□ 0.97
SSBP3-203ENST00000371319 ZMYM1Q5SVZ6 1142 aa21.1■□□□□ 0.97
SSBP3-203ENST00000371319 PI16Q6UXB8 463 aa21.1■□□□□ 0.97
SSBP3-203ENST00000371319 AKT1S1Q96B36 256 aa21.1■□□□□ 0.97
SSBP3-203ENST00000371319 SEC62Q99442 399 aaKnown RBP21.1■□□□□ 0.97
SSBP3-203ENST00000371319 HELLSQ9NRZ9 838 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms