RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 SMARCE1Q969G3 411 aa11.28□□□□□ -0.6
LRRC40-201ENST00000370952 ZBTB9Q96C00 473 aa11.28□□□□□ -0.6
LRRC40-201ENST00000370952 SEC62Q99442 399 aaKnown RBP11.28□□□□□ -0.6
LRRC40-201ENST00000370952 ORC3Q9UBD5 711 aaPredicted RBP11.28□□□□□ -0.6
LRRC40-201ENST00000370952 NDUFB9Q9Y6M9 179 aa11.28□□□□□ -0.6
LRRC40-201ENST00000370952 FLT4P35916 1363 aa11.28□□□□□ -0.6
LRRC40-201ENST00000370952 MYH15Q9Y2K3 1946 aa11.27□□□□□ -0.6
LRRC40-201ENST00000370952 KCNQ3O43525 872 aa11.27□□□□□ -0.6
LRRC40-201ENST00000370952 SASH1O94885 1247 aa11.27□□□□□ -0.6
LRRC40-201ENST00000370952 SCRN1Q12765 414 aa11.27□□□□□ -0.6
LRRC40-201ENST00000370952 PTPN21Q16825 1174 aa11.27□□□□□ -0.6
LRRC40-201ENST00000370952 ENGASEQ8NFI3 743 aa11.27□□□□□ -0.6
LRRC40-201ENST00000370952 SDF4Q9BRK5 362 aa11.27□□□□□ -0.6
LRRC40-201ENST00000370952 ZSCAN16Q9H4T2 348 aaPredicted RBP11.27□□□□□ -0.6
LRRC40-201ENST00000370952 RCOR1Q9UKL0 485 aa11.27□□□□□ -0.6
LRRC40-201ENST00000370952 A0A1B0GVL5 298 aa11.27□□□□□ -0.61
LRRC40-201ENST00000370952 URI1O94763 535 aaPredicted RBP11.27□□□□□ -0.61
LRRC40-201ENST00000370952 FAM193AP78312 1265 aa11.27□□□□□ -0.61
LRRC40-201ENST00000370952 FAM160A1Q05DH4 1040 aa11.27□□□□□ -0.61
LRRC40-201ENST00000370952 SLC20A2Q08357 652 aa11.27□□□□□ -0.61
LRRC40-201ENST00000370952 CWF19L2Q2TBE0 894 aaKnown RBP11.27□□□□□ -0.61
LRRC40-201ENST00000370952 CCDC129Q6ZRS4 1044 aa11.27□□□□□ -0.61
LRRC40-201ENST00000370952 CERS3Q8IU89 383 aa11.27□□□□□ -0.61
LRRC40-201ENST00000370952 CREBRFQ8IUR6 639 aa11.27□□□□□ -0.61
LRRC40-201ENST00000370952 FAM177A1Q8N128 213 aaPredicted RBP11.27□□□□□ -0.61
LRRC40-201ENST00000370952 MNS1Q8NEH6 495 aa11.27□□□□□ -0.61
LRRC40-201ENST00000370952 CCDC34Q96HJ3 373 aa11.27□□□□□ -0.61
LRRC40-201ENST00000370952 CARD6Q9BX69 1037 aa11.27□□□□□ -0.61
LRRC40-201ENST00000370952 KCND1Q9NSA2 647 aa11.27□□□□□ -0.61
LRRC40-201ENST00000370952 USP6P35125 1406 aa11.27□□□□□ -0.61
LRRC40-201ENST00000370952 FANCGO15287 622 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 GYS2P54840 703 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 CCT2P78371 535 aaKnown RBP11.26□□□□□ -0.61
LRRC40-201ENST00000370952 GOLGA8FQ08AF8 430 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 GOLGA8DPQ0D2H9 430 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 ISM2Q6H9L7 571 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 KRBA2Q6ZNG9 492 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 NFATC2IPQ8NCF5 419 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 KLHDC4Q8TBB5 520 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 NEK1Q96PY6 1258 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 LRRC37A3O60309 1634 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 NRXN3Q9Y4C0 1643 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 HIP1O00291 1037 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 SASH3O75995 380 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 TEX35Q5T0J7 233 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 NUTM2GQ5VZR2 741 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 TMX1Q9H3N1 280 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 ARGLU1Q9NWB6 273 aaPredicted RBP11.26□□□□□ -0.61
LRRC40-201ENST00000370952 NALCNQ8IZF0 1738 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 MED23Q9ULK4 1368 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 PSDA5PKW4 1024 aaPredicted RBP11.26□□□□□ -0.61
LRRC40-201ENST00000370952 TAF5LO75529 589 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 OAS2P29728 719 aaKnown RBP11.26□□□□□ -0.61
LRRC40-201ENST00000370952 ETF1P62495 437 aaKnown RBP11.26□□□□□ -0.61
LRRC40-201ENST00000370952 MLECQ14165 292 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 CCDC150Q8NCX0 1101 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
LRRC40-201ENST00000370952 NAT10Q9H0A0 1025 aaKnown RBP11.26□□□□□ -0.61
LRRC40-201ENST00000370952 SBNO1A3KN83 1393 aa11.26□□□□□ -0.61
LRRC40-201ENST00000370952 COL15A1P39059 1388 aa11.25□□□□□ -0.61
LRRC40-201ENST00000370952 LMOD1P29536 600 aaPredicted RBP11.25□□□□□ -0.61
LRRC40-201ENST00000370952 TPM4P67936 248 aa11.25□□□□□ -0.61
LRRC40-201ENST00000370952 ALDH8A1Q9H2A2 487 aaPredicted RBP11.25□□□□□ -0.61
LRRC40-201ENST00000370952 NCOA5Q9HCD5 579 aaKnown RBP11.25□□□□□ -0.61
LRRC40-201ENST00000370952 IMPACTQ9P2X3 320 aa11.25□□□□□ -0.61
LRRC40-201ENST00000370952 SETD1BQ9UPS6 1966 aaKnown RBP11.25□□□□□ -0.61
LRRC40-201ENST00000370952 G3BP1Q13283 466 aaKnown RBP eCLIP11.25□□□□□ -0.61
LRRC40-201ENST00000370952 ERC1Q8IUD2 1116 aa11.25□□□□□ -0.61
LRRC40-201ENST00000370952 MAP3K2Q9Y2U5 619 aa11.25□□□□□ -0.61
LRRC40-201ENST00000370952 PTPDC1A2A3K4 754 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 MTX1Q13505 466 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 ZRSR1Q15695 479 aaKnown RBP11.24□□□□□ -0.61
LRRC40-201ENST00000370952 OSCARQ8IYS5 282 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 NSUN7Q8NE18 718 aaKnown RBP11.24□□□□□ -0.61
LRRC40-201ENST00000370952 HMG20BQ9P0W2 317 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 PCDHA7Q9UN72 937 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 ROBO2Q9HCK4 1378 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 TRIM66O15016 1216 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 TADA3O75528 432 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 CTDNEP1O95476 244 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 ATP1A3P13637 1013 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 NDUFA8P51970 172 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 EVCP57679 992 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 EIF4A1P60842 406 aaKnown RBP11.24□□□□□ -0.61
LRRC40-201ENST00000370952 APOBRQ0VD83 1088 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 FMR1NBQ8N0W7 255 aaPredicted RBP11.24□□□□□ -0.61
LRRC40-201ENST00000370952 LGR6Q9HBX8 967 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 LCMT1Q9UIC8 334 aa11.24□□□□□ -0.61
LRRC40-201ENST00000370952 TBC1D8O95759 1140 aa11.23□□□□□ -0.61
LRRC40-201ENST00000370952 CYP21A2P08686 494 aa11.23□□□□□ -0.61
LRRC40-201ENST00000370952 GNL2Q13823 731 aaKnown RBP11.23□□□□□ -0.61
LRRC40-201ENST00000370952 OTUD7BQ6GQQ9 843 aa11.23□□□□□ -0.61
LRRC40-201ENST00000370952 TRIM65Q6PJ69 517 aa11.23□□□□□ -0.61
LRRC40-201ENST00000370952 RICTORQ6R327 1708 aa11.23□□□□□ -0.61
LRRC40-201ENST00000370952 C10orf67Q8IYJ2 551 aa11.23□□□□□ -0.61
LRRC40-201ENST00000370952 SMARCC2Q8TAQ2 1214 aa11.23□□□□□ -0.61
LRRC40-201ENST00000370952 MRPS27Q92552 414 aaKnown RBP11.23□□□□□ -0.61
LRRC40-201ENST00000370952 SUCLG2Q96I99 432 aa11.23□□□□□ -0.61
LRRC40-201ENST00000370952 SNRKQ9NRH2 765 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms