RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 RFX1P22670 979 aa6.16□□□□□ -1.42
UBE3D-202ENST00000369746 INTS3Q68E01 1043 aaKnown RBP6.16□□□□□ -1.42
UBE3D-202ENST00000369746 SKAP1Q86WV1 359 aa6.16□□□□□ -1.42
UBE3D-202ENST00000369746 EFCC1Q9HA90 598 aa6.16□□□□□ -1.42
UBE3D-202ENST00000369746 CABP2Q9NPB3 220 aa6.16□□□□□ -1.42
UBE3D-202ENST00000369746 WDR33Q9C0J8 1336 aaKnown RBP6.16□□□□□ -1.42
UBE3D-202ENST00000369746 IGBP1P78318 339 aa6.16□□□□□ -1.42
UBE3D-202ENST00000369746 CFAP70Q5T0N1 1121 aa6.16□□□□□ -1.42
UBE3D-202ENST00000369746 ENOX1Q8TC92 643 aaKnown RBP6.16□□□□□ -1.42
UBE3D-202ENST00000369746 NEUROD6Q96NK8 337 aa6.16□□□□□ -1.42
UBE3D-202ENST00000369746 RPS6KC1Q96S38 1066 aa6.16□□□□□ -1.42
UBE3D-202ENST00000369746 DIS3Q9Y2L1 958 aaKnown RBP6.16□□□□□ -1.42
UBE3D-202ENST00000369746 SCN7AQ01118 1682 aa6.15□□□□□ -1.42
UBE3D-202ENST00000369746 CAPN15O75808 1086 aa6.15□□□□□ -1.42
UBE3D-202ENST00000369746 IGHDP01880 384 aa6.15□□□□□ -1.42
UBE3D-202ENST00000369746 TAGLNQ01995 201 aaKnown RBP6.15□□□□□ -1.42
UBE3D-202ENST00000369746 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.15□□□□□ -1.42
UBE3D-202ENST00000369746 GIPC2Q8TF65 315 aa6.15□□□□□ -1.42
UBE3D-202ENST00000369746 BACH2Q9BYV9 841 aa6.15□□□□□ -1.42
UBE3D-202ENST00000369746 RRAGCQ9HB90 399 aa6.15□□□□□ -1.42
UBE3D-202ENST00000369746 HMGB1P1B2RPK0 211 aaPredicted RBP6.15□□□□□ -1.43
UBE3D-202ENST00000369746 RPS6KA4O75676 772 aa6.15□□□□□ -1.43
UBE3D-202ENST00000369746 ZRANB2O95218 330 aaKnown RBP eCLIP6.15□□□□□ -1.43
UBE3D-202ENST00000369746 NLRP6P59044 892 aa6.15□□□□□ -1.43
UBE3D-202ENST00000369746 TMF1P82094 1093 aa6.15□□□□□ -1.43
UBE3D-202ENST00000369746 ZRSR2Q15696 482 aaKnown RBP6.15□□□□□ -1.43
UBE3D-202ENST00000369746 EGFLAMQ63HQ2 1017 aa6.15□□□□□ -1.43
UBE3D-202ENST00000369746 TMEM132EQ6IEE7 984 aa6.15□□□□□ -1.43
UBE3D-202ENST00000369746 GAS2L2Q8NHY3 880 aa6.15□□□□□ -1.43
UBE3D-202ENST00000369746 BEGAINQ9BUH8 593 aa6.15□□□□□ -1.43
UBE3D-202ENST00000369746 PARP3Q9Y6F1 533 aa6.15□□□□□ -1.43
UBE3D-202ENST00000369746 HOXA2O43364 376 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 MRE11P49959 708 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 TBX4P57082 545 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 DEFB115Q30KQ5 88 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 NUTM2GQ5VZR2 741 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 MYCBPQ99417 103 aaPredicted RBP6.14□□□□□ -1.43
UBE3D-202ENST00000369746 BSDC1Q9NW68 430 aaPredicted RBP6.14□□□□□ -1.43
UBE3D-202ENST00000369746 PGAP2Q9UHJ9 254 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 ZHX1Q9UKY1 873 aaPredicted RBP6.14□□□□□ -1.43
UBE3D-202ENST00000369746 MRVI1Q9Y6F6 885 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 TLL2Q9Y6L7 1015 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 HSP90AB1P08238 724 aaKnown RBP6.14□□□□□ -1.43
UBE3D-202ENST00000369746 SSR1P43307 286 aaKnown RBP6.14□□□□□ -1.43
UBE3D-202ENST00000369746 RIPK4P57078 832 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 BIRC2Q13490 618 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 ICE2Q659A1 982 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 BANK1Q8NDB2 785 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 MKL1Q969V6 931 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 PIF1Q9H611 641 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 KDM3BQ7LBC6 1761 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 MRC1P22897 1456 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 TJP1Q07157 1748 aa6.14□□□□□ -1.43
UBE3D-202ENST00000369746 ITGBL1O95965 494 aaPredicted RBP6.13□□□□□ -1.43
UBE3D-202ENST00000369746 COPB2P35606 906 aa6.13□□□□□ -1.43
UBE3D-202ENST00000369746 HS1BP3Q53T59 392 aa6.13□□□□□ -1.43
UBE3D-202ENST00000369746 ARHGAP27Q6ZUM4 889 aa6.13□□□□□ -1.43
UBE3D-202ENST00000369746 INO80BQ9C086 356 aaPredicted RBP6.13□□□□□ -1.43
UBE3D-202ENST00000369746 RNF181Q9P0P0 153 aa6.13□□□□□ -1.43
UBE3D-202ENST00000369746 FEZ2Q9UHY8 353 aaPredicted RBP6.13□□□□□ -1.43
UBE3D-202ENST00000369746 FCHSD2O94868 740 aa6.13□□□□□ -1.43
UBE3D-202ENST00000369746 VEGFBP49765 207 aa6.13□□□□□ -1.43
UBE3D-202ENST00000369746 STYK1Q6J9G0 422 aa6.13□□□□□ -1.43
UBE3D-202ENST00000369746 KIAA1211Q6ZU35 1233 aa6.13□□□□□ -1.43
UBE3D-202ENST00000369746 TTC30AQ86WT1 665 aa6.13□□□□□ -1.43
UBE3D-202ENST00000369746 MPHOSPH9Q99550 1183 aa6.13□□□□□ -1.43
UBE3D-202ENST00000369746 RAI14Q9P0K7 980 aa6.13□□□□□ -1.43
UBE3D-202ENST00000369746 AXIN2Q9Y2T1 843 aa6.13□□□□□ -1.43
UBE3D-202ENST00000369746 ZNF646O15015 1829 aaPredicted RBP6.13□□□□□ -1.43
UBE3D-202ENST00000369746 POTECB2RU33 542 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 NAT1P18440 290 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 LBX1P52954 281 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 TCEAL1Q15170 157 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 HABP4Q5JVS0 413 aaKnown RBP6.12□□□□□ -1.43
UBE3D-202ENST00000369746 DUSP27Q5VZP5 1158 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 PTF1AQ7RTS3 328 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 RPAINQ86UA6 219 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 KCNB2Q92953 911 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 ERVV-2B6SEH9 535 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 EIF3JO75822 258 aaKnown RBP6.12□□□□□ -1.43
UBE3D-202ENST00000369746 NAT2P11245 290 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 CTR9Q6PD62 1173 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 PDILTQ8N807 584 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 ANKRD24Q8TF21 1146 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 RSPH1Q8WYR4 309 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 DHX38Q92620 1227 aaKnown RBP6.12□□□□□ -1.43
UBE3D-202ENST00000369746 BCL2L13Q9BXK5 485 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 MCOLN1Q9GZU1 580 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 MEGF6O75095 1541 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 DDX60Q8IY21 1712 aaKnown RBP6.12□□□□□ -1.43
UBE3D-202ENST00000369746 IBTKQ9P2D0 1353 aaPredicted RBP6.12□□□□□ -1.43
UBE3D-202ENST00000369746 CCDC66A2RUB6 948 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 SMAPO00193 183 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 TM4SF1P30408 202 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 USP50Q70EL3 339 aaPredicted RBP6.12□□□□□ -1.43
UBE3D-202ENST00000369746 HSCBQ8IWL3 235 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 STAG1Q8WVM7 1258 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 TBC1D2Q9BYX2 928 aa6.12□□□□□ -1.43
UBE3D-202ENST00000369746 RBM28Q9NW13 759 aaKnown RBP6.12□□□□□ -1.43
UBE3D-202ENST00000369746 MINK1Q8N4C8 1332 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms