RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 COPS6Q7L5N1 327 aa18.75■□□□□ 0.59
SYNCRIP-202ENST00000369622 HIP1O00291 1037 aa18.75■□□□□ 0.59
SYNCRIP-202ENST00000369622 JAK2O60674 1132 aa18.75■□□□□ 0.59
SYNCRIP-202ENST00000369622 XAGE3Q8WTP9 111 aa18.75■□□□□ 0.59
SYNCRIP-202ENST00000369622 PDCP20941 246 aa18.74■□□□□ 0.59
SYNCRIP-202ENST00000369622 EPHA10Q5JZY3 1008 aa18.74■□□□□ 0.59
SYNCRIP-202ENST00000369622 ZNF397Q8NF99 534 aaPredicted RBP18.74■□□□□ 0.59
SYNCRIP-202ENST00000369622 SYTL4Q96C24 671 aaPredicted RBP18.74■□□□□ 0.59
SYNCRIP-202ENST00000369622 SEC62Q99442 399 aaKnown RBP18.74■□□□□ 0.59
SYNCRIP-202ENST00000369622 ATP5J2-PTCD1G3V325 749 aa18.74■□□□□ 0.59
SYNCRIP-202ENST00000369622 H3BQV1 296 aa18.74■□□□□ 0.59
SYNCRIP-202ENST00000369622 PTCD1O75127 700 aaKnown RBP18.74■□□□□ 0.59
SYNCRIP-202ENST00000369622 IGKV5-2P06315 115 aa18.74■□□□□ 0.59
SYNCRIP-202ENST00000369622 IFFO2Q5TF58 517 aa18.74■□□□□ 0.59
SYNCRIP-202ENST00000369622 AXIN2Q9Y2T1 843 aa18.74■□□□□ 0.59
SYNCRIP-202ENST00000369622 FUCA2Q9BTY2 467 aa18.74■□□□□ 0.59
SYNCRIP-202ENST00000369622 NLRP2Q9NX02 1062 aa18.74■□□□□ 0.59
SYNCRIP-202ENST00000369622 RPS6KB1P23443 525 aa18.73■□□□□ 0.59
SYNCRIP-202ENST00000369622 TYRO3Q06418 890 aa18.73■□□□□ 0.59
SYNCRIP-202ENST00000369622 DDX21Q9NR30 783 aaKnown RBP eCLIP18.73■□□□□ 0.592e-7■■■□□ 15.8
SYNCRIP-202ENST00000369622 CYP2C19P33261 490 aa18.73■□□□□ 0.59
SYNCRIP-202ENST00000369622 ANO6Q4KMQ2 910 aa18.73■□□□□ 0.59
SYNCRIP-202ENST00000369622 NFATC2IPQ8NCF5 419 aa18.73■□□□□ 0.59
SYNCRIP-202ENST00000369622 TAOK2Q9UL54 1235 aa18.73■□□□□ 0.59
SYNCRIP-202ENST00000369622 KRBA2Q6ZNG9 492 aa18.72■□□□□ 0.59
SYNCRIP-202ENST00000369622 TRIM5Q9C035 493 aa18.72■□□□□ 0.59
SYNCRIP-202ENST00000369622 TUBGCP6Q96RT7 1819 aa18.72■□□□□ 0.59
SYNCRIP-202ENST00000369622 DHX16O60231 1041 aaKnown RBP18.72■□□□□ 0.59
SYNCRIP-202ENST00000369622 DDX46Q7L014 1031 aaKnown RBP18.72■□□□□ 0.59
SYNCRIP-202ENST00000369622 RASSF4Q9H2L5 321 aa18.72■□□□□ 0.59
SYNCRIP-202ENST00000369622 TRMT1Q9NXH9 659 aaKnown RBP18.72■□□□□ 0.59
SYNCRIP-202ENST00000369622 GOLGA6L6A8MZA4 724 aa18.71■□□□□ 0.59
SYNCRIP-202ENST00000369622 ANKRD1Q15327 319 aa18.71■□□□□ 0.59
SYNCRIP-202ENST00000369622 UBE3BQ7Z3V4 1068 aa18.71■□□□□ 0.59
SYNCRIP-202ENST00000369622 CACNA1FO60840 1977 aa18.71■□□□□ 0.59
SYNCRIP-202ENST00000369622 TFCP2Q12800 502 aa18.71■□□□□ 0.59
SYNCRIP-202ENST00000369622 TOB2Q14106 344 aaPredicted RBP18.71■□□□□ 0.59
SYNCRIP-202ENST00000369622 FBXW7Q969H0 707 aa18.71■□□□□ 0.59
SYNCRIP-202ENST00000369622 ZNF446Q9NWS9 450 aa18.71■□□□□ 0.59
SYNCRIP-202ENST00000369622 SLFNL1Q499Z3 407 aa18.71■□□□□ 0.59
SYNCRIP-202ENST00000369622 FAM200AQ8TCP9 573 aa18.71■□□□□ 0.59
SYNCRIP-202ENST00000369622 NEUROD6Q96NK8 337 aa18.71■□□□□ 0.59
SYNCRIP-202ENST00000369622 TSPYL1Q9H0U9 437 aa18.7■□□□□ 0.58
SYNCRIP-202ENST00000369622 LRRC37A3O60309 1634 aa18.7■□□□□ 0.58
SYNCRIP-202ENST00000369622 ANKARQ7Z5J8 1434 aa18.7■□□□□ 0.58
SYNCRIP-202ENST00000369622 USP27XA6NNY8 438 aa18.7■□□□□ 0.58
SYNCRIP-202ENST00000369622 CEP135Q66GS9 1140 aa18.7■□□□□ 0.58
SYNCRIP-202ENST00000369622 Q6ZUG5 572 aa18.7■□□□□ 0.58
SYNCRIP-202ENST00000369622 RAPGEF4Q8WZA2 1011 aa18.7■□□□□ 0.58
SYNCRIP-202ENST00000369622 MRVI1Q9Y6F6 885 aa18.7■□□□□ 0.58
SYNCRIP-202ENST00000369622 NR1I2O75469 434 aa18.69■□□□□ 0.58
SYNCRIP-202ENST00000369622 BRF1Q92994 677 aa18.69■□□□□ 0.58
SYNCRIP-202ENST00000369622 NEK1Q96PY6 1258 aa18.69■□□□□ 0.58
SYNCRIP-202ENST00000369622 SCAND2PQ9GZW5 306 aaPredicted RBP18.69■□□□□ 0.58
SYNCRIP-202ENST00000369622 PXDNQ92626 1479 aa18.69■□□□□ 0.58
SYNCRIP-202ENST00000369622 NEURL1BA8MQ27 555 aa18.69■□□□□ 0.58
SYNCRIP-202ENST00000369622 TAF5LO75529 589 aa18.69■□□□□ 0.58
SYNCRIP-202ENST00000369622 CSB-PGBD3P0DP91 1061 aa18.69■□□□□ 0.58
SYNCRIP-202ENST00000369622 GCKRQ14397 625 aa18.69■□□□□ 0.58
SYNCRIP-202ENST00000369622 ZNF790Q6PG37 636 aa18.69■□□□□ 0.58
SYNCRIP-202ENST00000369622 LEO1Q8WVC0 666 aaPredicted RBP18.69■□□□□ 0.58
SYNCRIP-202ENST00000369622 ZCCHC17Q9NP64 241 aaKnown RBP18.69■□□□□ 0.58
SYNCRIP-202ENST00000369622 ST5P78524 1137 aa18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 SART3Q15020 963 aaKnown RBP18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 ARHGEF25Q86VW2 580 aa18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 DRC1Q96MC2 740 aa18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 DNAJC25Q9H1X3 360 aa18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 DBNLQ9UJU6 430 aaKnown RBP18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 KCNB2Q92953 911 aa18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 DBNDD2Q9BQY9 259 aa18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 CBX8Q9HC52 389 aa18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 USP16Q9Y5T5 823 aa18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 NOP2P46087 812 aaKnown RBP18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 PSEN1P49768 467 aa18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 ARID5BQ14865 1188 aa18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 PDIA6Q15084 440 aa18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 ANKRD13DQ6ZTN6 518 aa18.68■□□□□ 0.58
SYNCRIP-202ENST00000369622 ANKLE2Q86XL3 938 aa18.67■□□□□ 0.58
SYNCRIP-202ENST00000369622 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.67■□□□□ 0.58
SYNCRIP-202ENST00000369622 CCT2P78371 535 aaKnown RBP18.67■□□□□ 0.58
SYNCRIP-202ENST00000369622 GUCY1B3Q02153 619 aa18.67■□□□□ 0.58
SYNCRIP-202ENST00000369622 ZNF496Q96IT1 587 aaPredicted RBP18.67■□□□□ 0.58
SYNCRIP-202ENST00000369622 A0A087WWV3 80 aa18.66■□□□□ 0.58
SYNCRIP-202ENST00000369622 ZNF165P49910 485 aa18.66■□□□□ 0.58
SYNCRIP-202ENST00000369622 CNPY4Q8N129 248 aa18.66■□□□□ 0.58
SYNCRIP-202ENST00000369622 CCDC191Q8NCU4 936 aa18.66■□□□□ 0.58
SYNCRIP-202ENST00000369622 A0A087WZG4 1122 aa18.66■□□□□ 0.58
SYNCRIP-202ENST00000369622 MYO1CO00159 1063 aa18.66■□□□□ 0.58
SYNCRIP-202ENST00000369622 CHST3Q7LGC8 479 aa18.66■□□□□ 0.58
SYNCRIP-202ENST00000369622 TTC5Q8N0Z6 440 aa18.66■□□□□ 0.58
SYNCRIP-202ENST00000369622 FTOQ9C0B1 505 aaKnown RBP eCLIP18.66■□□□□ 0.584e-8■■■■□ 22.7
SYNCRIP-202ENST00000369622 ERCC6LQ2NKX8 1250 aa18.66■□□□□ 0.58
SYNCRIP-202ENST00000369622 TNNI3KQ59H18 835 aa18.65■□□□□ 0.58
SYNCRIP-202ENST00000369622 LRRN4CLQ8ND94 238 aa18.65■□□□□ 0.58
SYNCRIP-202ENST00000369622 PGBD1Q96JS3 809 aa18.65■□□□□ 0.58
SYNCRIP-202ENST00000369622 EFCC1Q9HA90 598 aa18.65■□□□□ 0.58
SYNCRIP-202ENST00000369622 FPGT-TNNI3KV9GXZ4 949 aa18.65■□□□□ 0.58
SYNCRIP-202ENST00000369622 NPHP3Q7Z494 1330 aa18.65■□□□□ 0.58
SYNCRIP-202ENST00000369622 CYP21A2P08686 494 aa18.64■□□□□ 0.57
SYNCRIP-202ENST00000369622 GORABQ5T7V8 394 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms