RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 PRR36Q9H6K5 1346 aa11.72□□□□□ -0.53
HIPK1-206ENST00000369559 TPM1P09493 284 aa11.72□□□□□ -0.53
HIPK1-206ENST00000369559 ST5P78524 1137 aa11.72□□□□□ -0.53
HIPK1-206ENST00000369559 TXNDC2Q86VQ3 553 aa11.72□□□□□ -0.53
HIPK1-206ENST00000369559 SMARCE1Q969G3 411 aa11.72□□□□□ -0.53
HIPK1-206ENST00000369559 XPO4Q9C0E2 1151 aaKnown RBP11.72□□□□□ -0.53
HIPK1-206ENST00000369559 GNAT3A8MTJ3 354 aa11.72□□□□□ -0.53
HIPK1-206ENST00000369559 CCP110O43303 1012 aa11.72□□□□□ -0.53
HIPK1-206ENST00000369559 TSGA10IPQ3SY00 556 aa11.72□□□□□ -0.53
HIPK1-206ENST00000369559 RASSF4Q9H2L5 321 aa11.72□□□□□ -0.53
HIPK1-206ENST00000369559 DNAI1Q9UI46 699 aa11.72□□□□□ -0.53
HIPK1-206ENST00000369559 USP31Q70CQ4 1352 aa11.71□□□□□ -0.53
HIPK1-206ENST00000369559 A0A0D9SFI3 127 aa11.71□□□□□ -0.53
HIPK1-206ENST00000369559 SOX12O15370 315 aa11.71□□□□□ -0.53
HIPK1-206ENST00000369559 TADA3O75528 432 aa11.71□□□□□ -0.53
HIPK1-206ENST00000369559 SMC2O95347 1197 aa11.71□□□□□ -0.53
HIPK1-206ENST00000369559 BEND3Q5T5X7 828 aa11.71□□□□□ -0.53
HIPK1-206ENST00000369559 NFATC2IPQ8NCF5 419 aa11.71□□□□□ -0.53
HIPK1-206ENST00000369559 CEP170BQ9Y4F5 1589 aaPredicted RBP11.71□□□□□ -0.53
HIPK1-206ENST00000369559 TMEM2Q9UHN6 1383 aa11.71□□□□□ -0.54
HIPK1-206ENST00000369559 EFCAB8A8MWE9 144 aa11.71□□□□□ -0.54
HIPK1-206ENST00000369559 SEC31AO94979 1220 aaKnown RBP11.71□□□□□ -0.54
HIPK1-206ENST00000369559 LTKP29376 864 aa11.71□□□□□ -0.54
HIPK1-206ENST00000369559 OAS2P29728 719 aaKnown RBP11.71□□□□□ -0.54
HIPK1-206ENST00000369559 MTX1Q13505 466 aa11.71□□□□□ -0.54
HIPK1-206ENST00000369559 CCDC158Q5M9N0 1113 aa11.71□□□□□ -0.54
HIPK1-206ENST00000369559 ERC1Q8IUD2 1116 aa11.71□□□□□ -0.54
HIPK1-206ENST00000369559 IFNKQ9P0W0 207 aa11.71□□□□□ -0.54
HIPK1-206ENST00000369559 AACSQ86V21 672 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 FBXW7Q969H0 707 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 FTOQ9C0B1 505 aaKnown RBP eCLIP11.7□□□□□ -0.54
HIPK1-206ENST00000369559 BABAM1Q9NWV8 329 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 MED23Q9ULK4 1368 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 TNNT3P45378 269 aaPredicted RBP11.7□□□□□ -0.54
HIPK1-206ENST00000369559 TAF7Q15545 349 aaPredicted RBP11.7□□□□□ -0.54
HIPK1-206ENST00000369559 ZSCAN26Q16670 478 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 FSIP1Q8NA03 581 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 DNAAF4Q8WXU2 420 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 ERCC4Q92889 916 aaPredicted RBP11.7□□□□□ -0.54
HIPK1-206ENST00000369559 EFCC1Q9HA90 598 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 EID1Q9Y6B2 187 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 IGSF1Q8N6C5 1336 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 TBC1D8O95759 1140 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 EYA1Q99502 592 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 BPIFA3Q9BQP9 254 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 CHMP4AQ9BY43 222 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 JCADQ9P266 1359 aa11.7□□□□□ -0.54
HIPK1-206ENST00000369559 SASH3O75995 380 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 KRT32Q14532 448 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 LRRFIP1Q32MZ4 808 aaKnown RBP11.69□□□□□ -0.54
HIPK1-206ENST00000369559 NAA16Q6N069 864 aaPredicted RBP11.69□□□□□ -0.54
HIPK1-206ENST00000369559 USP28Q96RU2 1077 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 ZCCHC17Q9NP64 241 aaKnown RBP11.69□□□□□ -0.54
HIPK1-206ENST00000369559 RSPH14Q9UHP6 348 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 METP08581 1390 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 UBR1Q8IWV7 1749 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 URI1O94763 535 aaPredicted RBP11.69□□□□□ -0.54
HIPK1-206ENST00000369559 HSP90B1P14625 803 aaKnown RBP11.69□□□□□ -0.54
HIPK1-206ENST00000369559 HDGFP51858 240 aaKnown RBP11.69□□□□□ -0.54
HIPK1-206ENST00000369559 SMC1AQ14683 1233 aaKnown RBP11.69□□□□□ -0.54
HIPK1-206ENST00000369559 ATL3Q6DD88 541 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 TRIM65Q6PJ69 517 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 FSD1Q9BTV5 496 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 CARD6Q9BX69 1037 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 CWC15Q9P013 229 aaKnown RBP11.69□□□□□ -0.54
HIPK1-206ENST00000369559 FLT4P35916 1363 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 PI4KAP2A4QPH2 592 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 ME1P48163 572 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 CC2D1AQ6P1N0 951 aaPredicted RBP11.69□□□□□ -0.54
HIPK1-206ENST00000369559 PI4KAP1Q8N8J0 262 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 CCDC191Q8NCU4 936 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 IL17REQ8NFR9 667 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 SMARCC2Q8TAQ2 1214 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 ZNF396Q96N95 335 aaPredicted RBP11.69□□□□□ -0.54
HIPK1-206ENST00000369559 ACEP12821 1306 aa11.69□□□□□ -0.54
HIPK1-206ENST00000369559 MYO1CO00159 1063 aa11.68□□□□□ -0.54
HIPK1-206ENST00000369559 EVCP57679 992 aa11.68□□□□□ -0.54
HIPK1-206ENST00000369559 ZRSR1Q15695 479 aaKnown RBP11.68□□□□□ -0.54
HIPK1-206ENST00000369559 DPCR1Q3MIW9 517 aa11.68□□□□□ -0.54
HIPK1-206ENST00000369559 SDF4Q9BRK5 362 aa11.68□□□□□ -0.54
HIPK1-206ENST00000369559 PA2G4Q9UQ80 394 aaKnown RBP11.68□□□□□ -0.54
HIPK1-206ENST00000369559 SBNO1A3KN83 1393 aa11.68□□□□□ -0.54
HIPK1-206ENST00000369559 NUTM2FA1L443 756 aa11.68□□□□□ -0.54
HIPK1-206ENST00000369559 IRX3P78415 501 aaPredicted RBP11.68□□□□□ -0.54
HIPK1-206ENST00000369559 NUTM2GQ5VZR2 741 aa11.68□□□□□ -0.54
HIPK1-206ENST00000369559 Q6ZUG5 572 aa11.68□□□□□ -0.54
HIPK1-206ENST00000369559 ZNF589Q86UQ0 364 aaPredicted RBP11.68□□□□□ -0.54
HIPK1-206ENST00000369559 FMR1NBQ8N0W7 255 aaPredicted RBP11.68□□□□□ -0.54
HIPK1-206ENST00000369559 NEK1Q96PY6 1258 aa11.68□□□□□ -0.54
HIPK1-206ENST00000369559 PARP3Q9Y6F1 533 aa11.68□□□□□ -0.54
HIPK1-206ENST00000369559 NRXN3Q9Y4C0 1643 aa11.68□□□□□ -0.54
HIPK1-206ENST00000369559 USP6P35125 1406 aa11.67□□□□□ -0.54
HIPK1-206ENST00000369559 SCRN1Q12765 414 aa11.67□□□□□ -0.54
HIPK1-206ENST00000369559 ANKLE2Q86XL3 938 aa11.67□□□□□ -0.54
HIPK1-206ENST00000369559 AK7Q96M32 723 aa11.67□□□□□ -0.54
HIPK1-206ENST00000369559 LLPHQ9BRT6 129 aaKnown RBP11.67□□□□□ -0.54
HIPK1-206ENST00000369559 FANCGO15287 622 aa11.67□□□□□ -0.54
HIPK1-206ENST00000369559 EIF2S2P20042 333 aaKnown RBP11.67□□□□□ -0.54
HIPK1-206ENST00000369559 USPL1Q5W0Q7 1092 aa11.67□□□□□ -0.54
HIPK1-206ENST00000369559 AEBP2Q6ZN18 517 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms