RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 GRAPLQ8TC17 118 aaPredicted RBP8.59□□□□□ -1.04
CSDE1-204ENST00000369530 MTMR14Q8NCE2 650 aa8.58□□□□□ -1.04
CSDE1-204ENST00000369530 E9PSI1 815 aa8.58□□□□□ -1.04
CSDE1-204ENST00000369530 IL1R1P14778 569 aa8.58□□□□□ -1.04
CSDE1-204ENST00000369530 BRD2P25440 801 aaKnown RBP8.58□□□□□ -1.04
CSDE1-204ENST00000369530 EXOSC9Q06265 439 aaKnown RBP8.58□□□□□ -1.04
CSDE1-204ENST00000369530 NYXQ9GZU5 481 aa8.58□□□□□ -1.04
CSDE1-204ENST00000369530 ANXA1P04083 346 aa8.58□□□□□ -1.04
CSDE1-204ENST00000369530 POLD1P28340 1107 aa8.58□□□□□ -1.04
CSDE1-204ENST00000369530 RASSF7Q02833 373 aa8.58□□□□□ -1.04
CSDE1-204ENST00000369530 FLIIQ13045 1269 aa8.58□□□□□ -1.04
CSDE1-204ENST00000369530 TWISTNBQ3B726 338 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-204ENST00000369530 TEX2Q8IWB9 1127 aa8.58□□□□□ -1.04
CSDE1-204ENST00000369530 TTC5Q8N0Z6 440 aa8.58□□□□□ -1.04
CSDE1-204ENST00000369530 PARP3Q9Y6F1 533 aa8.58□□□□□ -1.04
CSDE1-204ENST00000369530 CANXP27824 592 aaKnown RBP8.57□□□□□ -1.04
CSDE1-204ENST00000369530 KIAA2012Q0VF49 1180 aa8.57□□□□□ -1.04
CSDE1-204ENST00000369530 SSH1Q8WYL5 1049 aa8.57□□□□□ -1.04
CSDE1-204ENST00000369530 GLTPD2A6NH11 291 aa8.57□□□□□ -1.04
CSDE1-204ENST00000369530 TMC4Q7Z404 712 aa8.57□□□□□ -1.04
CSDE1-204ENST00000369530 TMEM51Q9NW97 253 aa8.57□□□□□ -1.04
CSDE1-204ENST00000369530 CASP8AP2Q9UKL3 1982 aa8.57□□□□□ -1.04
CSDE1-204ENST00000369530 CELF1Q92879 486 aaKnown RBP8.57□□□□□ -1.04
CSDE1-204ENST00000369530 ALDH1L1O75891 902 aa8.56□□□□□ -1.04
CSDE1-204ENST00000369530 NECTIN2Q92692 538 aa8.56□□□□□ -1.04
CSDE1-204ENST00000369530 VIL1P09327 827 aaKnown RBP8.56□□□□□ -1.04
CSDE1-204ENST00000369530 TTLL6Q8N841 843 aa8.56□□□□□ -1.04
CSDE1-204ENST00000369530 LINS1Q8NG48 757 aa8.56□□□□□ -1.04
CSDE1-204ENST00000369530 RBM46Q8TBY0 533 aaKnown RBP8.56□□□□□ -1.04
CSDE1-204ENST00000369530 ZNF384Q8TF68 577 aa8.56□□□□□ -1.04
CSDE1-204ENST00000369530 BSDC1Q9NW68 430 aaPredicted RBP8.56□□□□□ -1.04
CSDE1-204ENST00000369530 A0A0G2JS52 829 aa8.56□□□□□ -1.04
CSDE1-204ENST00000369530 KIF20AO95235 890 aa8.56□□□□□ -1.04
CSDE1-204ENST00000369530 MAP3K10Q02779 954 aa8.56□□□□□ -1.04
CSDE1-204ENST00000369530 RTF1Q92541 710 aaKnown RBP8.56□□□□□ -1.04
CSDE1-204ENST00000369530 COL11A1P12107 1806 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-204ENST00000369530 LMNB1P20700 586 aa8.55□□□□□ -1.04
CSDE1-204ENST00000369530 HIRAP54198 1017 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-204ENST00000369530 CTSWP56202 376 aa8.55□□□□□ -1.04
CSDE1-204ENST00000369530 SLC20A2Q08357 652 aa8.55□□□□□ -1.04
CSDE1-204ENST00000369530 HSP90AB3PQ58FF7 597 aa8.55□□□□□ -1.04
CSDE1-204ENST00000369530 DALRD3Q5D0E6 543 aaKnown RBP8.55□□□□□ -1.04
CSDE1-204ENST00000369530 TULP1O00294 542 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-204ENST00000369530 FRAT2O75474 233 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-204ENST00000369530 CNBD1Q8NA66 436 aa8.55□□□□□ -1.04
CSDE1-204ENST00000369530 SALL1Q9NSC2 1324 aa8.55□□□□□ -1.04
CSDE1-204ENST00000369530 MAPK8IP3Q9UPT6 1336 aa8.55□□□□□ -1.04
CSDE1-204ENST00000369530 SPTBN5Q9NRC6 3674 aaKnown RBP8.55□□□□□ -1.04
CSDE1-204ENST00000369530 XRCC6P12956 609 aaKnown RBP eCLIP8.55□□□□□ -1.04
CSDE1-204ENST00000369530 CCDC30Q5VVM6 783 aa8.55□□□□□ -1.04
CSDE1-204ENST00000369530 C2CD5Q86YS7 1000 aa8.55□□□□□ -1.04
CSDE1-204ENST00000369530 NIP7Q9Y221 180 aaKnown RBP eCLIP8.55□□□□□ -1.04
CSDE1-204ENST00000369530 FAM205AQ6ZU69 1335 aa8.54□□□□□ -1.04
CSDE1-204ENST00000369530 MKI67P46013 3256 aaKnown RBP8.54□□□□□ -1.04
CSDE1-204ENST00000369530 RPAP1Q9BWH6 1393 aaPredicted RBP8.54□□□□□ -1.04
CSDE1-204ENST00000369530 ZPR1O75312 459 aa8.54□□□□□ -1.04
CSDE1-204ENST00000369530 NEUROD2Q15784 382 aa8.54□□□□□ -1.04
CSDE1-204ENST00000369530 HDGFL1Q5TGJ6 251 aa8.54□□□□□ -1.04
CSDE1-204ENST00000369530 CC2D2BQ6DHV5 1058 aa8.54□□□□□ -1.04
CSDE1-204ENST00000369530 SIRT2Q8IXJ6 389 aa8.54□□□□□ -1.04
CSDE1-204ENST00000369530 SETDB2Q96T68 719 aa8.54□□□□□ -1.04
CSDE1-204ENST00000369530 UTP14AQ9BVJ6 771 aaKnown RBP8.54□□□□□ -1.04
CSDE1-204ENST00000369530 BBOX1O75936 387 aa8.54□□□□□ -1.04
CSDE1-204ENST00000369530 GPSM2P81274 684 aa8.54□□□□□ -1.04
CSDE1-204ENST00000369530 FTSJ3Q8IY81 847 aaKnown RBP8.54□□□□□ -1.04
CSDE1-204ENST00000369530 MAP3K2Q9Y2U5 619 aa8.54□□□□□ -1.04
CSDE1-204ENST00000369530 FAM155AB1AL88 458 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-204ENST00000369530 TAF3Q5VWG9 929 aa8.53□□□□□ -1.04
CSDE1-204ENST00000369530 NUTM1Q86Y26 1132 aa8.53□□□□□ -1.04
CSDE1-204ENST00000369530 SH3TC1Q8TE82 1336 aa8.53□□□□□ -1.04
CSDE1-204ENST00000369530 ZNF652Q9Y2D9 606 aa8.53□□□□□ -1.04
CSDE1-204ENST00000369530 REV3LO60673 3130 aa8.53□□□□□ -1.04
CSDE1-204ENST00000369530 ZBTB7BO15156 539 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-204ENST00000369530 PDE8AO60658 829 aa8.53□□□□□ -1.04
CSDE1-204ENST00000369530 TBC1D16Q8TBP0 767 aa8.53□□□□□ -1.04
CSDE1-204ENST00000369530 TNNQ9UQP3 1299 aa8.53□□□□□ -1.04
CSDE1-204ENST00000369530 AOX1Q06278 1338 aa8.53□□□□□ -1.04
CSDE1-204ENST00000369530 PI4KAP2A4QPH2 592 aa8.52□□□□□ -1.04
CSDE1-204ENST00000369530 ESPNB1AK53 854 aa8.52□□□□□ -1.04
CSDE1-204ENST00000369530 FSTL1Q12841 308 aa8.52□□□□□ -1.04
CSDE1-204ENST00000369530 PI4KAP1Q8N8J0 262 aa8.52□□□□□ -1.04
CSDE1-204ENST00000369530 CNKSR1Q969H4 720 aa8.52□□□□□ -1.04
CSDE1-204ENST00000369530 CFHR5Q9BXR6 569 aa8.52□□□□□ -1.04
CSDE1-204ENST00000369530 GTPBP4Q9BZE4 634 aaKnown RBP8.52□□□□□ -1.04
CSDE1-204ENST00000369530 MINPP1Q9UNW1 487 aa8.52□□□□□ -1.04
CSDE1-204ENST00000369530 CNTNAP1P78357 1384 aa8.52□□□□□ -1.05
CSDE1-204ENST00000369530 IGHA2P01877 340 aa8.52□□□□□ -1.05
CSDE1-204ENST00000369530 RLBP1P12271 317 aa8.52□□□□□ -1.05
CSDE1-204ENST00000369530 MMP14P50281 582 aa8.52□□□□□ -1.05
CSDE1-204ENST00000369530 PTPN12Q05209 780 aaKnown RBP8.52□□□□□ -1.05
CSDE1-204ENST00000369530 TPTE2Q6XPS3 522 aa8.52□□□□□ -1.05
CSDE1-204ENST00000369530 MRIQ9BWK5 157 aa8.52□□□□□ -1.05
CSDE1-204ENST00000369530 NBPF7P0C2Y1 421 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-204ENST00000369530 SOGA3Q5TF21 947 aa8.52□□□□□ -1.05
CSDE1-204ENST00000369530 SUCLG2Q96I99 432 aa8.52□□□□□ -1.05
CSDE1-204ENST00000369530 HHIPL1Q96JK4 782 aa8.52□□□□□ -1.05
CSDE1-204ENST00000369530 ZNF512BQ96KM6 892 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-204ENST00000369530 OFD1O75665 1012 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 CIAO1O76071 339 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 CWF19L2Q2TBE0 894 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms