RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 ADORA1P30542 326 aa20.42■□□□□ 0.86
PHGDH-202ENST00000369409 SF3B3Q15393 1217 aaKnown RBP20.42■□□□□ 0.86
PHGDH-202ENST00000369409 ATP2B3Q16720 1220 aa20.42■□□□□ 0.86
PHGDH-202ENST00000369409 CCDC24Q8N4L8 307 aa20.42■□□□□ 0.86
PHGDH-202ENST00000369409 USP26Q9BXU7 913 aa20.42■□□□□ 0.86
PHGDH-202ENST00000369409 IL25Q9H293 177 aa20.42■□□□□ 0.86
PHGDH-202ENST00000369409 NPHP1O15259 732 aa20.41■□□□□ 0.86
PHGDH-202ENST00000369409 IGHMBP2P38935 993 aaKnown RBP20.41■□□□□ 0.86
PHGDH-202ENST00000369409 EDC3Q96F86 508 aaKnown RBP20.41■□□□□ 0.86
PHGDH-202ENST00000369409 XAGE2Q96GT9 111 aa20.41■□□□□ 0.86
PHGDH-202ENST00000369409 DNAJC2Q99543 621 aaKnown RBP20.41■□□□□ 0.86
PHGDH-202ENST00000369409 DIAPH3Q9NSV4 1193 aa20.41■□□□□ 0.86
PHGDH-202ENST00000369409 NDUFB9Q9Y6M9 179 aa20.41■□□□□ 0.86
PHGDH-202ENST00000369409 MROH5Q6ZUA9 1318 aa20.41■□□□□ 0.86
PHGDH-202ENST00000369409 FSD1Q9BTV5 496 aa20.41■□□□□ 0.86
PHGDH-202ENST00000369409 TFCP2L1Q9NZI6 479 aa20.41■□□□□ 0.86
PHGDH-202ENST00000369409 AKT1S1Q96B36 256 aa20.4■□□□□ 0.86
PHGDH-202ENST00000369409 CDC5LQ99459 802 aaKnown RBP20.4■□□□□ 0.86
PHGDH-202ENST00000369409 HAUS7Q99871 368 aa20.4■□□□□ 0.86
PHGDH-202ENST00000369409 PDE8BO95263 885 aa20.39■□□□□ 0.86
PHGDH-202ENST00000369409 GORABQ5T7V8 394 aa20.39■□□□□ 0.86
PHGDH-202ENST00000369409 CWC27Q6UX04 472 aaKnown RBP20.39■□□□□ 0.86
PHGDH-202ENST00000369409 ANO2Q9NQ90 1003 aa20.39■□□□□ 0.86
PHGDH-202ENST00000369409 CNBD1Q8NA66 436 aa20.39■□□□□ 0.85
PHGDH-202ENST00000369409 HELBQ8NG08 1087 aaPredicted RBP20.39■□□□□ 0.85
PHGDH-202ENST00000369409 NLRP3Q96P20 1036 aa20.39■□□□□ 0.85
PHGDH-202ENST00000369409 AKAP11Q9UKA4 1901 aa20.38■□□□□ 0.85
PHGDH-202ENST00000369409 SGSM2O43147 1006 aa20.38■□□□□ 0.85
PHGDH-202ENST00000369409 TTC39AQ5SRH9 613 aa20.38■□□□□ 0.85
PHGDH-202ENST00000369409 MYH7P12883 1935 aa20.38■□□□□ 0.85
PHGDH-202ENST00000369409 IFIT1P09914 478 aaKnown RBP20.37■□□□□ 0.85
PHGDH-202ENST00000369409 SLC4A3P48751 1232 aa20.37■□□□□ 0.85
PHGDH-202ENST00000369409 PUM3Q15397 648 aaKnown RBP20.37■□□□□ 0.85
PHGDH-202ENST00000369409 CCDC158Q5M9N0 1113 aa20.37■□□□□ 0.85
PHGDH-202ENST00000369409 ANKRD18AQ8IVF6 992 aa20.37■□□□□ 0.85
PHGDH-202ENST00000369409 KIF2CQ99661 725 aa20.37■□□□□ 0.85
PHGDH-202ENST00000369409 DDX46Q7L014 1031 aaKnown RBP20.37■□□□□ 0.85
PHGDH-202ENST00000369409 RFX7Q2KHR2 1363 aa20.36■□□□□ 0.85
PHGDH-202ENST00000369409 HIP1O00291 1037 aa20.36■□□□□ 0.85
PHGDH-202ENST00000369409 RUFY2Q8WXA3 655 aa20.36■□□□□ 0.85
PHGDH-202ENST00000369409 DAXXQ9UER7 740 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-202ENST00000369409 TAF5LO75529 589 aa20.35■□□□□ 0.85
PHGDH-202ENST00000369409 PRR5LQ6MZQ0 368 aa20.35■□□□□ 0.85
PHGDH-202ENST00000369409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.35■□□□□ 0.85
PHGDH-202ENST00000369409 PAG1Q9NWQ8 432 aa20.35■□□□□ 0.85
PHGDH-202ENST00000369409 GOLIM4O00461 696 aa20.35■□□□□ 0.85
PHGDH-202ENST00000369409 FGFR2P21802 821 aa20.35■□□□□ 0.85
PHGDH-202ENST00000369409 CHRNDQ07001 517 aa20.35■□□□□ 0.85
PHGDH-202ENST00000369409 NMIQ13287 307 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-202ENST00000369409 BECN1Q14457 450 aa20.35■□□□□ 0.85
PHGDH-202ENST00000369409 COL23A1Q86Y22 540 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-202ENST00000369409 CELF1Q92879 486 aaKnown RBP20.35■□□□□ 0.85
PHGDH-202ENST00000369409 FAM227BQ96M60 508 aa20.35■□□□□ 0.85
PHGDH-202ENST00000369409 TM4SF1P30408 202 aa20.34■□□□□ 0.85
PHGDH-202ENST00000369409 LPIN2Q92539 896 aa20.34■□□□□ 0.85
PHGDH-202ENST00000369409 QSER1Q2KHR3 1735 aa20.34■□□□□ 0.85
PHGDH-202ENST00000369409 SERPINB2P05120 415 aa20.33■□□□□ 0.85
PHGDH-202ENST00000369409 SLC5A1P13866 664 aa20.33■□□□□ 0.85
PHGDH-202ENST00000369409 DDR1Q08345 913 aa20.33■□□□□ 0.85
PHGDH-202ENST00000369409 MYO5AQ9Y4I1 1855 aaKnown RBP20.33■□□□□ 0.85
PHGDH-202ENST00000369409 NRXN2Q9P2S2 1712 aa20.33■□□□□ 0.85
PHGDH-202ENST00000369409 ANKRD31Q8N7Z5 1873 aa20.33■□□□□ 0.84
PHGDH-202ENST00000369409 A0A0D9SFI3 127 aa20.33■□□□□ 0.84
PHGDH-202ENST00000369409 SNAP23O00161 211 aa20.33■□□□□ 0.84
PHGDH-202ENST00000369409 EN1Q05925 392 aaPredicted RBP20.33■□□□□ 0.84
PHGDH-202ENST00000369409 SCARF1Q14162 830 aa20.33■□□□□ 0.84
PHGDH-202ENST00000369409 EZH2Q15910 746 aaKnown RBP20.33■□□□□ 0.84
PHGDH-202ENST00000369409 KBTBD3Q8NAB2 608 aa20.33■□□□□ 0.84
PHGDH-202ENST00000369409 BSDC1Q9NW68 430 aaPredicted RBP20.33■□□□□ 0.84
PHGDH-202ENST00000369409 RAD50Q92878 1312 aa20.32■□□□□ 0.84
PHGDH-202ENST00000369409 ST5P78524 1137 aa20.32■□□□□ 0.84
PHGDH-202ENST00000369409 TBC1D2Q9BYX2 928 aa20.32■□□□□ 0.84
PHGDH-202ENST00000369409 SNRKQ9NRH2 765 aa20.32■□□□□ 0.84
PHGDH-202ENST00000369409 PNPLA7Q6ZV29 1317 aa20.32■□□□□ 0.84
PHGDH-202ENST00000369409 POLRMTO00411 1230 aaKnown RBP20.31■□□□□ 0.84
PHGDH-202ENST00000369409 FKBP4Q02790 459 aaKnown RBP eCLIP20.31■□□□□ 0.84
PHGDH-202ENST00000369409 LSG1Q9H089 658 aaKnown RBP20.31■□□□□ 0.84
PHGDH-202ENST00000369409 MCCP23508 829 aa20.3■□□□□ 0.84
PHGDH-202ENST00000369409 PHKA1P46020 1223 aa20.3■□□□□ 0.84
PHGDH-202ENST00000369409 KIAA1211Q6ZU35 1233 aa20.3■□□□□ 0.84
PHGDH-202ENST00000369409 ERICH6Q7L0X2 663 aa20.3■□□□□ 0.84
PHGDH-202ENST00000369409 FLAD1Q8NFF5 587 aa20.3■□□□□ 0.84
PHGDH-202ENST00000369409 CAMKK2Q96RR4 588 aa20.3■□□□□ 0.84
PHGDH-202ENST00000369409 ANTXR1Q9H6X2 564 aa20.3■□□□□ 0.84
PHGDH-202ENST00000369409 MED23Q9ULK4 1368 aa20.3■□□□□ 0.84
PHGDH-202ENST00000369409 EPB41L2O43491 1005 aaKnown RBP20.3■□□□□ 0.84
PHGDH-202ENST00000369409 MCAMP43121 646 aa20.3■□□□□ 0.84
PHGDH-202ENST00000369409 RPS8P62241 208 aaKnown RBP20.3■□□□□ 0.84
PHGDH-202ENST00000369409 CCDC102BQ68D86 513 aa20.3■□□□□ 0.84
PHGDH-202ENST00000369409 PI16Q6UXB8 463 aa20.3■□□□□ 0.84
PHGDH-202ENST00000369409 ANO8Q9HCE9 1232 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-202ENST00000369409 CHGBP05060 677 aa20.29■□□□□ 0.84
PHGDH-202ENST00000369409 MINPP1Q9UNW1 487 aa20.29■□□□□ 0.84
PHGDH-202ENST00000369409 DOCK2Q92608 1830 aa20.29■□□□□ 0.84
PHGDH-202ENST00000369409 MYH13Q9UKX3 1938 aa20.29■□□□□ 0.84
PHGDH-202ENST00000369409 ZAP70P43403 619 aa20.28■□□□□ 0.84
PHGDH-202ENST00000369409 ZNF512BQ96KM6 892 aaPredicted RBP20.28■□□□□ 0.84
PHGDH-202ENST00000369409 PALD1Q9ULE6 856 aa20.28■□□□□ 0.84
PHGDH-202ENST00000369409 CCDC171Q6TFL3 1326 aa20.28■□□□□ 0.84
PHGDH-202ENST00000369409 ARID4AP29374 1257 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms