RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 EEF2P13639 858 aaKnown RBP8.29□□□□□ -1.08
SYNE1-208ENST00000367256 ALDH3A1P30838 453 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 MIPOL1Q8TD10 442 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 CAPZA3Q96KX2 299 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 RASSF4Q9H2L5 321 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 CA8P35219 290 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 GJC1P36383 396 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 UBA7P41226 1012 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 UBASH3AP57075 661 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 SETDB1Q15047 1291 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 ANO6Q4KMQ2 910 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 A0A1B0GUA9 196 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 NBPF11Q86T75 865 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 UTP14AQ9BVJ6 771 aaKnown RBP8.29□□□□□ -1.08
SYNE1-208ENST00000367256 CPSF2Q9P2I0 782 aaKnown RBP8.29□□□□□ -1.08
SYNE1-208ENST00000367256 SCAF11Q99590 1463 aaKnown RBP8.29□□□□□ -1.08
SYNE1-208ENST00000367256 NUCB1Q02818 461 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 CEP128Q6ZU80 1094 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 INTS4Q96HW7 963 aaKnown RBP8.29□□□□□ -1.08
SYNE1-208ENST00000367256 MYD88Q99836 296 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 STIM2Q9P246 746 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 TMEM110-MUSTN1A8MSY1 372 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 GMNNO75496 209 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 SYT1P21579 422 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 SLC26A6Q9BXS9 759 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 SLC12A5Q9H2X9 1139 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 ECHDC1Q9NTX5 307 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-208ENST00000367256 POTEDQ86YR6 584 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 TSGA10Q9BZW7 698 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 TTC21BQ7Z4L5 1316 aa8.29□□□□□ -1.08
SYNE1-208ENST00000367256 HCLS1P14317 486 aaPredicted RBP8.28□□□□□ -1.08
SYNE1-208ENST00000367256 KRT83P78385 493 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 HDXQ7Z353 690 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 SMC5Q8IY18 1101 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 MICALL1Q8N3F8 863 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 SPAG5Q96R06 1193 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 GON4LQ3T8J9 2241 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 RTL1A6NKG5 1358 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 MAP3K9P80192 1104 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 ISM2Q6H9L7 571 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 TACC1O75410 805 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 SNX16P57768 344 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 SARNPP82979 210 aaKnown RBP8.28□□□□□ -1.08
SYNE1-208ENST00000367256 LMBR1Q8WVP7 490 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 STMN2Q93045 179 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 PANK2Q9BZ23 570 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 NPHP3Q7Z494 1330 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 A0A1B0GUL7 405 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 SH3BP5O60239 455 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 JAKMIP2Q96AA8 810 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 GDPD2Q9HCC8 539 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 ANKRD24Q8TF21 1146 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 VPS18Q9P253 973 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 SETSIPP0DME0 302 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 IARSP41252 1262 aaKnown RBP8.28□□□□□ -1.08
SYNE1-208ENST00000367256 SEC62Q99442 399 aaKnown RBP8.28□□□□□ -1.08
SYNE1-208ENST00000367256 KRT86O43790 486 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 TRIM27P14373 513 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 SH3BGRP55822 239 aaPredicted RBP8.28□□□□□ -1.08
SYNE1-208ENST00000367256 RAB3GAP1Q15042 981 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 AMOTQ4VCS5 1084 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 FAM76AQ8TAV0 307 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 CCDC114Q96M63 670 aa8.28□□□□□ -1.08
SYNE1-208ENST00000367256 SMIM23A6NLE4 172 aa8.27□□□□□ -1.08
SYNE1-208ENST00000367256 HLA-DOAP06340 250 aa8.27□□□□□ -1.08
SYNE1-208ENST00000367256 ZFYP08048 801 aaPredicted RBP8.27□□□□□ -1.08
SYNE1-208ENST00000367256 TRMT1LQ7Z2T5 733 aaKnown RBP8.27□□□□□ -1.08
SYNE1-208ENST00000367256 KIAA1524Q8TCG1 905 aa8.27□□□□□ -1.08
SYNE1-208ENST00000367256 IFT74Q96LB3 600 aa8.27□□□□□ -1.08
SYNE1-208ENST00000367256 SWAP70Q9UH65 585 aa8.27□□□□□ -1.08
SYNE1-208ENST00000367256 CRCPO75575 148 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 ATP11AP98196 1134 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 NAA25Q14CX7 972 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 GBP6Q6ZN66 633 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 MRPS27Q92552 414 aaKnown RBP8.27□□□□□ -1.09
SYNE1-208ENST00000367256 TRIM7Q9C029 511 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 PHACTR2O75167 634 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 LACTBP83111 547 aaPredicted RBP8.27□□□□□ -1.09
SYNE1-208ENST00000367256 NCOA7Q8NI08 942 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 CNPY2Q9Y2B0 182 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 SLC4A8Q2Y0W8 1093 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 FAM184BQ9ULE4 1060 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 USP16Q9Y5T5 823 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 PIK3R4Q99570 1358 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 CPLX4Q7Z7G2 160 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 PTGS1P23219 599 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 ERO1AQ96HE7 468 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 IMPG2Q9BZV3 1241 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 AFMP43652 599 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 PPP1R7Q15435 360 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 CCDC110Q8TBZ0 833 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 ZEB2O60315 1214 aa8.27□□□□□ -1.09
SYNE1-208ENST00000367256 NUP160Q12769 1436 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 ARID5AQ03989 594 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 EPSTI1Q96J88 318 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 LARP6Q9BRS8 491 aaKnown RBP8.26□□□□□ -1.09
SYNE1-208ENST00000367256 DNAI1Q9UI46 699 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 ASIC1P78348 528 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms